Oncorhynchus kisutch (coho salmon): 109901963
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Entry
109901963 CDS
T09179
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2 isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109901963
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109901963
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
109901963
NCBI-ProteinID:
XP_020353583
Ensembl:
ENSOKIG00005012054
UniProt:
A0A8C7FGF2
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All DBs
Position
LG13:62568146..62571631
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AA seq
580 aa
AA seq
DB search
MGDKKQDSVERPADGNKNQTSDSLQQVTAPGNSKGRKKRGKKKRSAKKMEHKEGEMDKFA
PLQSVLVQSQSEESSPAQSPSVQADPPLGQSNREKPTPEQPIPEQPKPETPKPAQRNPAQ
PLTGHQNPATLPSALPNQAQPEQPNPVHPNLSQPPLDHLSLTQSKDQPTEAQPHPDQGPP
TRLSTDQSSPQQSSPDQPDPSSPHQSSPDQSSPNQSSPDQSSPQQSSPDHPDPSSPHLSS
PDLSFPHQSSPDQSSPQQSSPDHPDPSSPHQSSPDQSSPNQSSPDQSSPQQSSPQQLLPK
HPDQSSQSSPDEDKPKKKGDPNKLSLLTWNIDGLDLDDIKERLSRLLDYLIKYHPDIVLL
QEVISPIYQVLQQVLKPYHVLPGSDRSYFTVILLRKSRVQLLESSIVNYPTTEMRRNLLM
AHVSFLGHPLCVMTSHMESMKPRSLERQNQLRTVWKTMREQSQDHSVIFGGDTNLRDWEV
KNQGGLPENICDVWESLGQPEDCRYTWDCVTNDNKDLPFPARLRFDRIFLRQAGEGSKVS
PDGITLVGLERLNDCQRFTSDHWGLLCTFIIKPLSQATPE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagaaacaagactcagtggaaaggccagcagatggcaataagaaccagacg
agtgactccctccaacaggttacagcccctggaaattccaaggggagaaagaagagagga
aagaaaaagaggagtgccaagaagatggagcacaaggagggagagatggacaaatttgcc
ccattgcagtctgtcctggttcaatcacaatcagaggaatctagcccagcccaatcccca
tcagtgcaagctgacccacctttagggcaatctaatcgagagaaacctacaccagagcaa
cctatcccggagcaacccaaaccagagacacccaaaccagcacaacgtaaccctgcccaa
ccacttacagggcatcaaaacccagccacgctcccttcagcgctacccaatcaagcccaa
ccagagcaacccaatccagtgcaccctaacctatcccaaccacctttagaccatctctcc
ctaacccagtcaaaggaccagccaactgaagcccaaccacatccagatcagggtcctcca
acccggttatccacagatcagtcatctccacaacagtcttcaccagatcagccagatccg
tcatctccacaccagtcatcaccagatcagtcatctccaaaccagtcatcaccagatcag
tcatctccacaacagtcatcaccagatcatccagatccgtcatctccacatttgtcatca
ccagatctgtcatttccacaccagtcatcaccagatcagtcatctccacaacagtcatca
ccagatcatccagatccgtcatctccacaccagtcatcaccagatcagtcatctccaaac
cagtcatcaccagatcagtcatctccacaacagtcatctccacaacagttattacctaaa
catccagatcagtcatcacagtcatctccagacgaggacaaacctaagaaaaagggagat
ccaaacaaactttcccttctgacctggaacatagatggcctggacctggacgatatcaag
gaacgtctctcaaggctactggactatctgatcaagtaccaccccgacattgtgctactg
caagaggttatttcaccaatttaccaggttttacagcaggttctgaagccgtatcatgtg
ttgccgggtagtgacagaagctatttcactgtcatactgctgaggaagtccagagttcaa
cttctggagagtagcatagtgaattatcctaccacagagatgaggagaaacctgcttatg
gcccatgtttctttccttggccatccattgtgtgtgatgacgtcccacatggagagcatg
aagccccgatccctggaacgccagaaccagctgaggacggtgtggaagacaatgagggag
cagtcccaggaccacagcgtcatctttgggggagacaccaacctcagggactgggaggtg
aagaaccagggcggtctacccgagaacatctgtgacgtatgggagtccctgggccagccg
gaagactgccggtacacctgggactgtgtcaccaatgacaacaaggacctccctttcccc
gcacgcctgcgcttcgaccgcatcttcctgaggcaggccggcgaggggtcaaaggtcagc
ccagatggtatcaccctggtgggcctggagaggttgaatgactgtcaacgctttaccagt
gaccactggggtctcctctgcaccttcatcataaaaccactcagtcaagcaacacctgaa
tga
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integrated database retrieval system
