Oncorhynchus kisutch (coho salmon): 109902234
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Entry
109902234 CDS
T09179
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109902234
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109902234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
109902234
NCBI-ProteinID:
XP_020354005
Ensembl:
ENSOKIG00005006353
UniProt:
A0A8C7D4B2
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Position
LG13:complement(49787749..49810892)
Genome browser
AA seq
788 aa
AA seq
DB search
MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKSFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNKMKNGVDSNKSTGSPVRSPLEKDTSHKRL
DVSDSEPESEKEEYSDKRQKEKYNVEHKKDERAVDLKKERYTEAFKNKRHAEQSKNGKHT
KDARKERHVEHLEEPKKERHFEKSRKERHVPIHDTKNERHVQEPKKESNLEEPKNESHTD
DPRKERHTDERRKEIPMYEPPQERPVENHRQGFERRSVLDDLYPSCYSPPRPPRPPRLPL
PVRRMSGEVNKGVKKEVKKERERRDSSDTLSPSHPRPTPPSRRPSVKVKKERKKAPPDPN
SPLPPLHPHPSMPTAAEVKKERKEPPRISVVRKEPPDPNAPFAPLPLHLHPPPHVKRPSV
EVKKEREESSDYKPVSLKVTSSDHVKKDRKDSDSKVPKKTSVDAKKERKDLSDSKPKPAK
RQSLDSSDSNPKRSKRQSLDSSDSNPKRSKRQSLDGKKDRKDSTDSKPSHSVKRHSTDSK
SDRRDSVDSKTSNSPSAKKLSSETKEFHSSKSSHPGPLQRKSSTDSIERRGKPEMPKIPT
TPTSPMSPSFSSAGVPLSLCLATGETIRDKCIEMLAAALRTDDNFKEFGTNCDSMAAEIE
DHIYTEMGSTDMKYKNRVRSRISNLKDPKNPGLRRNVLAGGIELRRFAIMSAEEMASDEL
KQLRNNLTKEAIREHQLSKTSGTISDLFQCSKCGKKNCTYNQMQTRSADEPMTTFVLCNE
CGNRWKFC
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaggagttaattcggattgcaaaaaagctggacaagatggtgtctaga
aataacacggagggtgccctggacctgctgaatgaactgaagagcttcaacatgacactg
aaacttctgcaggaaacgagaatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtagtttccctggccaagatcctcatcaaggactggaagagactgctggat
gctgcacgtactcagagtacggagaggcccaataagatgaagaatggggttgactccaac
aaatccacagggtccccagtcaggtcccccttagagaaagacaccagtcacaagaggctg
gatgtttctgattcagaacctgaatctgaaaaggaagaatactctgacaaacggcaaaaa
gagaagtacaatgttgaacacaaaaaagacgagagagctgttgaccttaaaaaggagcga
tatacagaggcattcaaaaacaaacggcatgcagaacaatccaaaaacggaaaacataca
aaagatgccagaaaagaaagacatgtagaacacttagaagaacccaaaaaggagagacac
ttcgaaaaatccagaaaagaaagacatgtacctatacatgacacaaaaaatgaaagacat
gtgcaagaacccaagaaagaaagtaacctcgaagaacccaaaaacgagagccacacagat
gatccgagaaaggaaagacacacagatgaacgcagaaaggagataccaatgtacgaaccc
ccacaagagagacctgttgaaaaccacagacaagggtttgagaggagaagcgtcttggat
gatctttacccctcttgttactctcctcctcgccccccccgaccaccccgtcttcctctc
cctgtcagacgtatgtctggggaggtgaataaaggggtgaaaaaagaggtgaagaaggag
agagagaggagagattcttcagacactctgtctccttctcatcctcgtcccacccctccg
tccagacgtccctcagtgaaggtgaagaaagagaggaaaaaagctcctcctgaccctaat
tccccacttcctcctcttcatcctcatccttctatgcccactgcagcagaggtcaagaag
gagagaaaagagcctccgcggatttctgtggttagaaaagagcctccggaccccaatgct
ccatttgctcctcttcctctccatctccatcctccccctcacgtgaagcgcccatcagtg
gaagtcaaaaaggagagagaagagtcgtcagattacaaacccgtttctctgaaggtgacg
tcatctgaccatgtgaaaaaggatagaaaagactccgatagcaaagtgcccaaaaaaaca
tctgttgatgccaagaaagaaagaaaggatttgtcagattccaaaccaaaacctgctaaa
aggcagagtctggactcgtcagattccaatccaaaacgttctaaaaggcagagtctggac
tcgtcagattccaatccaaaacgttctaaaaggcagagtctggatggcaagaaagacaga
aaggactccactgactccaagcccagccattctgtgaaacgtcattcgactgattccaaa
tcagacaggagggactctgtggattccaagactagcaactcaccctcagctaagaagctc
tctagcgagacgaaagaatttcatagctccaagtcgtctcaccctggccctctgcagaga
aagtcctcaacggacagtattgaacggagagggaaaccagagatgccaaagattcccacc
acccccaccagtcccatgtccccctccttcagctcagcaggggttcccctgtccctttgc
cttgccactggagaaaccatcagggacaagtgcatcgagatgctggctgctgctctacgt
acagatgacaacttcaaagaatttgggacaaactgtgactccatggcagcagagattgaa
gatcatatttacacggagatgggatccacagatatgaagtataaaaacagggtgcggagc
cgcatcagcaacctgaaggaccccaaaaaccctggactgcggaggaacgtcctggctgga
ggcatcgagctgagacgcttcgccatcatgtctgctgaggagatggctagtgatgagctg
aagcagctgaggaacaatctgactaaggaggccattagggaacaccaactgtccaaaacc
agcggtaccatttctgacctgtttcagtgcagcaagtgcggcaaaaagaactgcacctac
aaccagatgcagacccgcagcgctgatgagcctatgactacttttgttctgtgtaacgag
tgcgggaaccgctggaagttctgctga
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