Oncorhynchus kisutch (coho salmon): 109902254
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Entry
109902254 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109902254
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109902254
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109902254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
DUF7027
zf_RING_Vps8_fungal
PHDvar_NSD
RINGv
zf-RING_16
zf-RING-like
zf-RING_4
PHD
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
109902254
NCBI-ProteinID:
XP_020354052
Ensembl:
ENSOKIG00005022946
LinkDB
All DBs
Position
LG13:47592009..47690703
Genome browser
AA seq
378 aa
AA seq
DB search
MLFSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGNFDDLPARFGYRLP
SDGLKGFLIGARPQNACEPIDPPPIRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKAAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFVSEETADSLKKDYAYDKGGHVVLMPDFSLPL
EYYLIPFLIIVGICLILIVVFMITKFVQSRHRARRSRLRKDQLKKLPIHKYNKGDAYDVC
AICLDEYEEGDKLRVLPCSHAYHNKCVDPWLTKTRKTCPVCKQKVVPSAGDSDSDSEEGD
SGPDENEVSESTPLLRSMASTSGHSFGTMSGASRSDPDQESSEYEDDHLDTSDDSEVTVE
TVVQLQEPRPDDHDPVRA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctccctggggatgctgatgctgtccgccacacagatctacaccatctttacc
gtgcagctctttgccttcctcaacctgctgcccgtcgaggccgacatctctgcctacaca
tttgacaacaaaacgggaaactttgatgacctgcctgcacggtttgggtaccggttgccc
agcgatggactcaagggctttctgattggtgcacggccccaaaatgcctgcgaacccatt
gacccgccccctattcgggacaacctcactggtgccttcatcgtgctcatcaagcgcttc
gactgcaactttgacatcaaggtccttaacgcccagaaggccgggtacaaggcggcgatt
gttcacaacgtggactctgatgacttaatcagcatgggatccaatgatctggatattttg
aagcagattgacattccatcagtgtttgtgagcgaagagactgccgactccctgaaaaag
gactacgcatatgacaaggggggtcatgtggtcctcatgccggacttcagcctgcctctg
gaatactacctgatccccttcctcatcatcgtgggaatctgcctcatcctcatcgtcgtt
ttcatgatcaccaagtttgtccagagcagacacagggctcggagaagccgtctgcgcaag
gaccagctgaagaaacttcccattcacaagtacaataaaggggacgcctacgatgtgtgt
gccatatgcctggatgagtacgaggagggagacaagctccgggtcctgccctgctctcac
gcttaccacaacaagtgtgtggacccctggctgaccaagaccaggaagacgtgtcctgtg
tgcaagcagaaggtggtcccctctgcgggcgactcagactccgattcggaggagggcgac
agcgggcccgatgagaacgaggtgtcagagagcaccccgctgctgcgctccatggcctcc
accagcggccactcttttggcaccatgtcgggcgcctcacgttccgaccccgatcaggag
tcctccgagtatgaagacgaccacctggacaccagcgacgacagcgaggttaccgtggag
acagtggtgcagctgcaggagcctcgtcctgacgaccacgacccggtccgcgcctga
DBGET
integrated database retrieval system
