Oncorhynchus kisutch (coho salmon): 109902409
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Entry
109902409 CDS
T09179
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00260
Glycine, serine and threonine metabolism
oki00270
Cysteine and methionine metabolism
oki00450
Selenocompound metabolism
oki00670
One carbon pool by folate
oki01100
Metabolic pathways
oki01230
Biosynthesis of amino acids
Module
oki_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109902409
00270 Cysteine and methionine metabolism
109902409
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
109902409
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109902409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109902409
Enzymes [BR:
oki01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
109902409
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109902409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
109902409
NCBI-ProteinID:
XP_020354318
Ensembl:
ENSOKIG00005004013
LinkDB
All DBs
Position
LG13:complement(39824839..39832973)
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AA seq
405 aa
AA seq
DB search
MASSHHQNDLSTGFHPQFKSFATEAIHVGQEPEQWKSMAVVPPISLSTTFKQYSPGDHAG
FEYSRSGNPTRNCLEKAVAALDGAKHCLALASGLAATMTISHMLKAGDGIVCMNDVYGGT
NRYFRKIAAEVGLVVSFADCTKIELLQAALKPNTKLVWIETPTNPTMKVVDIQACADVVH
QHNTHTVVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSVNREDLYDRL
RFLQNALGAVPSPFDCYLCNRGLKTLHLRMRQHFKNALAAAKFLEADPRVDRVIFPGLPS
HPQHELMKKQCTGCPGMITFYIKGKLENATMFLSNLKLFALAESLGGYESLAEHPAIMTH
ASVPESDRAALGISDTMVRLSVGLEDEQDIIEDLEQALNAAHPKK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcacaccatcaaaacgacctgtccaccggtttccacccgcagttcaaatct
ttcgcaacagaagcgatccacgttgggcaagaaccggagcaatggaaatctatggccgta
gtaccacctatttctctgtccaccacgttcaagcagtatagccctggagatcatgctggt
tttgagtacagtcggagtggaaacccgaccagaaactgcctggagaaagctgttgctgct
ctggatggagcaaaacactgtcttgctcttgcctctgggctggctgcgactatgaccatc
tctcacatgctgaaagctggagatggcattgtctgcatgaacgatgtatatggaggtacc
aatcgttatttccgaaagattgctgcagaagttggcttggttgtgtcctttgctgattgc
accaaaatcgagttgctccaggctgctcttaagccaaacacaaaattggtatggatcgag
acccccaccaaccccaccatgaaagtggtggatatccaggcctgtgcagatgtggtccac
caacacaacactcatactgtggtggttgtggacaacactttcatgtcagcctacttccag
cgccccctggccctcggcgcggacatatgcatgtattcagctactaagtacatgaatggt
cacagtgacgttgtaatgggcctggtgtctgtgaatcgggaggacctgtatgaccgactg
aggtttctacagaacgccctcggagcggtgccgtccccctttgactgctacctgtgtaac
cgcggcctaaaaaccctgcacctgcgcatgaggcagcacttcaagaacgccctggcagcg
gccaagttcctggaggcagaccccagggtggaccgagtcatcttcccaggcttgccctcc
cacccccagcacgagctgatgaagaaacagtgcacaggctgcccagggatgatcaccttc
tacataaagggaaaactggagaacgccaccatgttcctcagcaacttaaagttatttgca
cttgccgagagcctcggtggttatgaaagcttggcagagcatccggcgataatgacccat
gcgtctgttcctgagagtgatagggcggcccttgggatcagtgacacaatggtccgtctg
tctgtggggctggaggacgagcaggacatcatcgaggacctggaacaagccctgaacgcc
gctcatccaaagaagtaa
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integrated database retrieval system