Oncorhynchus kisutch (coho salmon): 109902498
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Entry
109902498 CDS
T09179
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109902498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109902498
04131 Membrane trafficking [BR:
oki04131
]
109902498
03029 Mitochondrial biogenesis [BR:
oki03029
]
109902498
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109902498
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
109902498
mRNA cycle factors
P-body specific factors
109902498
Membrane trafficking [BR:
oki04131
]
Others
Actin-binding proteins
Myosins
109902498
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109902498
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109902498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
109902498
NCBI-ProteinID:
XP_020354476
LinkDB
All DBs
Position
LG13:36166321..36186379
Genome browser
AA seq
1680 aa
AA seq
DB search
MIGTMELYAKGASVWVPDPEAVWVSAKLLKDYNLGDENVVLQISDGREVQYPVAPPSGLP
PLANPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYDQLPIYG
EEVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGAGKTVSAKFTMRYF
AVVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMR
TYLLEKSRVVFQASQERNYHIFYQLCASRDLPEMRVLKLGGAETFRYTNQGGEDSMQIPG
TDDVVDLERTRNAFTILGVPPDQQMELFRILAAVLHLGNVNIQASGRGGDRSYIDGEERS
LSVFSKLLGVERTQMAHWLCHRRLTVGGEMLVKPMPGQQSLEARDALAKHVYGQLFTWTV
TRLNSALRAQSEKPKSFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFQLEQE
EYVREELPWSRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSEESWARKLYDQHQSNN
PSPHFRKPRMSNTAFIILHFADMVQYECDGFLDKNRDTVFEEPINILRASQSELVSELFQ
QKPVGGSLSLSEGKSSLPNGSLRSGPGMRAQREHKLTVGFQFRQSLQLLMDTLNSTTPHY
IRCIKPNDLKEPFMFDPKRAVQQLRACGVLETIRISAAGYPSRWTYAEFFSRYRVLLRGG
GVQTQEQIQASCQRALPELIPDPEQYCFGKTKVFFRAGQVALLERLRAERLRAAGVIIQS
WVRGWLGRRRYIKTRWATLTIQRYIRGALARRLADLLRYTKAALIIQKTYRMVAIRQMFL
MIREATVTIQAFTRGSLARRQYRRVVAERAAVLLQSAVRGWLARLAYRRVRAAIVLMQCC
VRRRAARRELLKLKAEARSVEKFRELNKGMEVKLMQLQLRADQKARESGALRETLQAERK
AHNTELDTLRGALVKLEYQLETQLQTQQSQPSTAITDEETEERRRAEEKAAQEILRLTQE
VQALRVERDCLGKEKEDLTTRLLEQETAQEESVVQAVAQEGKALTAELDEERRKYQGLLR
EFTRLEQRYENLREMSMLTEHSKGYRRTDSNQSLIMEPPSPSPMSPPFSGPPTFPAKPSF
FGLPPFPSPEEVRRVSVTSPTAERRAWLSSDTLMDTLMENMGVAKDSAGKMTGEDLWHAY
DAVRVANKFLENQLRSQRSQEEAELEAKRTCSDPSPSADQQYLVELVEAREQEVCRLRRE
LKELRHTVTLRRLLAQTGPVLSQSTEDSSALHAKAGTVTGLLECRKRDEAKLMKTLITDV
RVDSALSLSPGLAASVLFLCVRQADCSGDEIRARSLCTAAVTAMKGALKKHCNDVDMTAL
WLKNACLLNDLLTQHSKQDEDLVPLTSDLSELNRALSALCIQAYQQLLSISETRLQPIIV
PAMLESEMIPGLSGSGVKLGNFRKRAGSDPRAVERNAGETPSMAAVLRELGALHTSLSRQ
ALPPTLMEQAFRQLTHLLSASALNSLLLRKDMCSWSRGLQIRYNVSLLEEWLRTRGLQAG
GAVALLEPLIQAAQLLQVGKKTDADAQALVHTCTALSTQQIVKILTLYTPHSDLEERVTL
NFIRTVQGLLKERLGGQPPQLLMDVRRVFPVTFPYLLPPPVRADQLDIPDSLKISFLRRP
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgattggaactatggagttgtacgccaagggtgccagtgtgtgggtacctgacccagag
gcagtgtgggtatcagccaagctcctcaaggactacaaccttggagatgagaatgtggtg
ctgcagatcagcgatggcagggaggtgcagtacccagtggcgccaccctctggcctcccc
cctctggcgaaccctgatattctggagggggagaatgacctcactgctctcagcttcctg
cacgagcctgctgttctacacaacctgagagtccgattcctggactacagcagcatctac
acctactgtgggattgtgttggtggccctcaacccatatgaccagctgcccatctatgga
gaggaagtgatcgatgcctacagtgggcaggacatggctgacatggagcctcacatcttc
tctgtggcagaagaggcctaccgcaccatgaccagggaggagaagaaccagtccattata
atcagtggggaatctggagcagggaaaacagtctctgctaagttcaccatgcgctacttt
gctgtggtggggggagcagcccagcagaccagtgtggaggagagagtactggcttctaac
cccatcatggagtccattgggaatgctaagactacacgcaatgacaacagtagccggttt
gggaagtacattgagatcggcttcggacggaagggggacatcattggggccaacatgagg
acgtacctgctggagaagtctcgagtcgtcttccaggcgtcacaggagagaaactaccac
atcttctaccagctgtgtgcttctagagacctgccagagatgagagtcctcaaactgggt
ggtgcagaaacgttccgctacacaaaccaaggaggggaagattccatgcagatcccaggc
actgatgatgtagtagatctggagcgcactcgcaatgctttcaccattctaggtgtgcct
ccggaccagcagatggagctcttcaggatccttgcagctgttctgcacctgggcaatgtc
aacatccaggccagtgggagaggtggtgatcgaagttacattgatggggaggagcgttcc
ctgtcggtgttctccaagctgctgggggtggagaggacccagatggcccactggctgtgc
caccgcaggctgacagtagggggagagatgctggtcaagcccatgcctggtcagcagtcc
ctagaggcccgggatgccctggccaagcatgtgtacggtcagctgttcacctggacagtg
acccggctcaactcagcccttcgagcccagagcgagaagcccaagtcatttattggggtg
ctggacatctatgggtttgagacgtttgaaaggaacagttttgaacagttctgtataaat
tacgccaatgagaaattgcagcagcaattcaacaggcacgtgttccagttggagcaggag
gagtatgtccgtgaggagctgccgtggagcaggatagagttcagtgataaccagccgtgc
atcgctctcatcgagggacagctgggcctgctcgacctgctggatgaggagtgcaggatg
cccaaaggttcagaggagagctgggctaggaagctgtatgatcagcatcagagtaacaac
cccagtccacacttccgcaaacctcgaatgtccaacactgccttcatcatcctgcacttt
gctgacatggtccaatatgaatgtgatgggtttttagacaagaaccgggatacagttttt
gaggaacccatcaacatcctaagagccagtcagtctgagctggtgtctgagctgttccag
cagaagccagtagggggcagtctgtccctctcagaggggaagtcctctctgcccaatggc
agtctgcgctctggccctgggatgagagctcagcgggaacacaaactcactgtgggcttc
cagtttcgtcagtctctgcagctgctgatggacactctgaacagcaccacccctcactac
atccgctgtattaagcccaatgacctcaaagagccttttatgtttgaccctaaaagggcc
gtccagcagctgcgagcctgtggggtgctagagaccatacgcatcagtgctgcaggctac
ccatccaggtggacctatgcagagttcttcagccggtaccgggtgctgctgcgcgggggt
ggggttcagactcaggaacagatccaggcgtcgtgccagagggccctgccggagctcatt
ccagacccggagcagtattgctttgggaagaccaaggtgttcttccgtgctgggcaggtg
gctctgctggagaggctgagggcagagagactgagggcggccggggtgatcattcagagc
tgggtcagaggctggctgggccgcaggcgatacatcaagacacgctgggcaacactcacc
atccagagatacataagaggagccctggctaggcggctggcagaccttctgcgctacacc
aaggcagcgctgatcatccagaagacataccgtatggtggcgataagacagatgtttctg
atgatccgcgaggccaccgtcaccatccaggctttcaccaggggctcgctggcacgacgc
caatacagacgggtggtggcagagcgggctgcggtgttgctccagtctgcagtgcgtggc
tggctggcccgccttgcttacaggagggtgagggccgccatagtgttgatgcagtgttgt
gtgaggcggcgggctgccaggagggagctgctgaagctgaaggcagaggctcgctcggtg
gagaagttcagagaactcaacaagggcatggaggtcaaactgatgcagctgcagctcagg
gccgaccagaaggccagggagagcggtgctctgagagagaccctccaggcggagcgtaag
gcccacaacactgagctggacaccctgcggggggcgctagttaagctggagtaccagtta
gagacccagctccagactcagcagtctcagcccagcaccgccatcacagatgaggagacg
gaggagaggaggagggcagaggagaaagcagcccaggagatcctacgactcacacaggag
gtgcaggccctgcgggttgagagggactgtttggggaaagagaaggaggatctgaccact
cgattactggagcaggagacagctcaggaggagagtgtagtacaggctgtggcccaggaa
ggtaaagctctgacagcagagctggatgaagagaggaggaagtaccagggtctgctcaga
gagttcaccaggctggagcagagatacgaaaacctacgggaaatgagcatgctcactgag
cactctaagggctacagacggacagattcaaatcaaagcctgatcatggagcccccatct
ccttccccaatgtcgccgcccttttccgggccccctaccttcccagccaaaccttccttc
ttcggcctccctcccttcccctctccggaggaggtgaggagggttagtgtgacgtccccc
accgcagagaggagggcctggcttagctctgacacactcatggacactttgatggagaat
atgggtgtggctaaagactcagccgggaagatgaccggagaagacctgtggcacgcctat
gatgctgtacgagtggccaacaagttcttggagaaccagctgcgtagccagcgctctcag
gaggaggcggagctggaggctaaacggacgtgctctgatccctccccctctgcagaccag
cagtacctggtggaactggtggaagccagggagcaggaggtctgcagactgaggagagaa
ctgaaggagctgagacacacagtcaccctcagaagactactggcacagacaggtccagtg
ctttcccagtccacagaggattcctctgccctccatgccaaagctgggactgtcacaggg
ctgctggagtgtaggaagagggatgaggccaagctcatgaagaccctcatcacagacgtg
agggtggacagtgccctctccctgtcccctggcctggctgctagtgtgctgttcctgtgt
gtacgccaggcagactgtagcggagacgaaatccgtgcccgctctctctgtactgctgct
gtcactgccatgaagggggctctgaaaaaacactgtaatgatgtggacatgacagcactg
tggctgaaaaatgcctgccttctcaatgacctactgacccagcactccaaacaggatgag
gatttggttccgttgacctctgacctgagtgagttaaaccgtgctctgagtgccctctgt
atccaggcctatcagcagctcctgtccatctcagaaacccgcctgcagcccatcattgtt
cctgccatgctggagagtgagatgatcccaggactgtctgggtcgggggtgaagctgggg
aactttaggaagcgtgcggggtctgatcccagggccgtagagaggaatgcaggggagacc
cctagtatggctgcagtgctgagggagctgggtgccctccacacgtccctgtcccgccag
gccctaccccccaccctgatggagcaggccttccgtcagctcacccacctcctttctgcc
tctgccctcaacagcctgctgctacgcaaggacatgtgtagctggagccgcggcttgcag
atacggtataatgtgagtctgctggaggagtggttgcggacccgtgggctgcaggcaggg
ggagctgtggccctgttggagcctctcatccaggccgctcagctcctgcaagtgggcaag
aagacagacgctgacgcacaggccctcgttcacacctgcactgccctgtctacccagcag
attgtgaagattctgaccttgtacacccctcacagtgacctagaggagagggtgacactc
aattttatccgcacagtgcagggtctgctgaaggagcgtttaggcggtcagcctccacag
ctgctgatggatgtacggcgtgtgttccccgtcaccttcccctacctgctgcccccgcct
gtccgcgctgaccagctggacatcccagactccctcaaaatctccttcctacgacggcct
tag
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