Oncorhynchus kisutch (coho salmon): 109902565
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Entry
109902565 CDS
T09179
Symbol
rfx2
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109902565 (rfx2)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Other basic domains
RF-X
109902565 (rfx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
109902565
NCBI-ProteinID:
XP_020354607
Ensembl:
ENSOKIG00005032940
LinkDB
All DBs
Position
LG13:33586198..33646391
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AA seq
730 aa
AA seq
DB search
MQSSEGGSDSSSSVALRTSTSAQAPVVQPVPASQQRVLVQATGSAQKGVQVQQLSVPRLQ
QVPQQVQQIHHVYPSQVQYVGEGGEAVYTNGTIRTAYSYNPEAQLYGQGSGGAYFDSQGG
GSQVTTVVSSASGVPPHGMVGITMDVGGSQIISGGSTYLIHGGGMEGGRHHASHSSRSSS
AMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQK
LDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDSQYMAMRQ
QPVHQKQRFKPLQKVDGMGDSLSGGSQHSASTPEQSVAAQSQHHQQYIDVSHVLPPFPIP
DLGTQPLPERINMNDVKKLQNLYRDHCEATLDVVMNLQFHYIEKLWQTFWFSTAPSSDGT
TTIPNSDEDMEGVIPRQKLIALCKYEPVKLWMRSCDHILYQALVEILIPDVLRPVPSTLT
QAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTSLNHLAQAARAVLQNT
SQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLEQDFKVTLQQQSSLDQWAAWLDNV
VNQVLKPHEGSPSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
LVEHRVAQATGETPIAVMGEFSDLNSMMLMDKDPSFSDDMSDIGSDEGRGPNEPAVKRER
IEINHSLQEI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagagggagggtccgattcgtcgtccagtgtggcgctgcgtacgtccacc
tccgcccaggcccccgtggtgcagcctgtcccagcctcacaacagagggtgctggttcag
gccacaggctcagcccagaagggagtgcaggtgcagcagctgtcagtcccccggctgcaa
caggtccctcagcaggtccagcagatccatcatgtctacccctcccaggttcaatatgtg
ggagaggggggagaagcagtttacactaatggaaccatccggacagcctactcctataac
cctgaggcccagctgtatggccagggcagtggaggagcctattttgactctcagggcggg
ggttcccaggtcacgactgtggtctcctccgccagtggtgtgccgccccacggcatggtg
ggcatcaccatggatgtgggcggcagtcagatcatctcaggtggcagcacctacctgatc
cacggcgggggcatggagggaggccgccaccacgcctcacactcctcccgctcctcctct
gctatgcttgaaatggcgattgaaaacctccaaaagtcggaagggattgcaactcacaaa
agcagcctgctcaacagccatctgcagtggttgctggataactatgagacagcagagggg
gtgagcctgccccggagctccctctacaaccactacctgcgccactgtcaggagcagaaa
ctggacccggtcaacgctgcctcctttgggaaactcatccgctccgtcttcatgggcctc
aggacccgccgcctcggcacaagaggcaactccaaataccactactatggcattagactg
aagccagactccccactcaacagactgcaagaggactctcagtacatggccatgagacag
cagcctgtgcaccagaaacaaaggttcaagcccctccagaaggtggatggcatgggggac
agcctgtcaggaggctcccagcattcagccagcaccccagagcagtctgtggcagcccag
agccagcaccaccagcagtacattgatgtgtcccatgtcctgcccccgttccccatccct
gacctgggcacccagcccctccctgaacgcatcaatatgaacgacgtgaagaagttgcag
aacctgtacagggaccactgtgaggctactctggacgtggtgatgaacctccagttccac
tacattgagaagctgtggcagaccttctggttttcaacagcgccatctagtgacggaacc
accaccatccccaacagtgatgaggatatggagggggtgatccccaggcagaagctgatt
gctctgtgcaagtatgagcctgtcaagctgtggatgaggagctgtgaccacatcttgtac
caggccttggtggagatcctcatccctgacgtgctgcgccctgtccccagcactctcact
caggccatccgcaactttgccaagagtctggagggctggctgaccacagctatgagtgac
tttcccaatgagattgtccgcaccaaggcagcggtggtgagtgcgtttgcccagaccctg
cgtcggtacacctctctgaaccacctggcccaggcggcccgcgctgtgctgcagaacacc
tctcagattaaccagatgctcagcgacctcaatcgtgtcgacttcgccaacgtacaggag
caggcgtcgtgggtgtgtcagtgtgacgagagcgttgtccagcggctggagcaggacttc
aaggtgaccctgcagcagcagagctctctggaccagtgggccgcctggctcgacaacgtg
gtcaaccaggtccttaagccccacgaaggtagccccagctttcccagggccgcacgacag
ttcctgctcaagtggtccttctacagctccatggtaatcagggacctgaccctgcgtagt
gctgctagtttcggctccttccacctcatcagactgctctacgatgagtacatgttctac
ctggtggagcaccgcgtcgcccaggcaaccggagagacgcccatcgctgttatgggagag
ttcagtgaccttaactcgatgatgctcatggacaaagacccgtccttctcagatgacatg
agtgacataggcagtgacgagggccgagggcccaacgagccggctgtgaaaagagagagg
atcgaaatcaaccactcgctgcaggaaatctga
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