Oncorhynchus kisutch (coho salmon): 109902575
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Entry
109902575 CDS
T09179
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109902575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109902575
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
RNases
109902575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
109902575
NCBI-ProteinID:
XP_020354624
Ensembl:
ENSOKIG00005040161
LinkDB
All DBs
Position
LG13:complement(33351937..33362345)
Genome browser
AA seq
1308 aa
AA seq
DB search
MLRSTGFFRGIDCPFYTDSCNGKSGKYGCNRPYCHFRHSKHRRASYGSNDTRTSKELYSK
QKEQGGYDPFNPEVVRPEEQQNGEPAAATVDMGALELELVNRAIEAVRSEVEREKKKLSQ
IGDLEYDPSASSPKVLLKPLSQTGDQKYDPTASSPKLVPKPPSRFGDQEYDPTASSPKVM
ANWPKPQAVASHLAYDPGSYQMTTTADYNPTPRSSKYTLDSDSKDNHASSMEYVPTSVTK
TALKRPAPRTRSPHLPSPPTSPKYSNNAAFSKNKYTVDNSKPSTDMEYDPLSNYSAKIAV
KDKKDQRTGASKGEVKKRPHLSGTGKLSTDEEYVPTTKKPRQVIPDPLKYTASFSESDEE
SSGTEYRPTSLSRLQRRKSSSGSVEEAFGPGKGERTERALGGLKQQRSREAKEQEDSENQ
EVARQKDKPETEKVPGKTSHMKSIKVEKVHKSEKESSKKSGSSKEKGAGDGKKISDSKTS
SHETAKKDSKNQGKKEEEKSKIKDKSIDKGKEGQEEKRSDVKSKLRTDKVKGASSKSERE
KGGGDSKKLKTSDKEKDSSKFKEHKNGKHDSSGRERGSNKVSKGSSNSSKDKVKKTGGKT
GKVKQRSLSHVDLFGDESAEEKREEDDEEEKIVRKSAAAFKRGHFNKRNASELTPSSSED
DDVGPEDDRGYDDMDGGGVDYSGLQMDMDFDLDEDPMEECLRIFNESKDVKTEDKGRQAK
PSKDSDDEDDTDSNQTTLFPGQKKRVSHFSAKGSTEATPKPPPYRRLTAQEICYQRMQIA
QQQASQLAAAVKTASTPRPRPSLSPFPGERKRVAHRPTPLPSSSKSGLVEAKLAGSRVLS
PTRTLPGGVSVKAQTSAGILSKTTTTIAQKRVAHTPTMKSSAMKRPVIPTEFGAKVPTNV
RQRYLNNFIDECMKFCPSEDLAFQMALEEEKVVYDRSSSKNIYLNVAVNTLKKLRSKSSS
PTSPVARSPAVVGNMKAQSHEEVLGGRLAAKTSFTINRTGKQQEEKLSGVRLYRKLRDYL
MTEEQLQEHGYPRPHPERSGRAVVHNVPEKKNVDPFAKVCCRCGAEYKINANGNCVRKEE
CNHHWGRLRRHKVSGGWETNYSCCSGTVGSPGCSVSKQHVQDGRKESLDGYVQTFEKQLP
PDGNGGVYALDCEMCYTKQGLELTRVTVINSELKVIYDTFVKPESKVVDYNTRFSGVTEE
DLENATITLRDVQAVILNMFSTESILIGHSLESDLFALKVIHSTVVDTAIVFPHRLGLPY
KRALRNLMADHLKRIIQDSVEGHDSSEDACACMELMIWKIREDAKVKR
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccaccggtttcttccgtggaattgactgcccgttttacacggatagctgc
aatgggaaaagcggcaaatatgggtgcaacagaccatactgccacttcagacacagcaaa
catagacgtgcgtcttatggctcaaatgacactagaacatcaaaagaactttactccaaa
caaaaggaacaaggtggctatgacccattcaacccagaggtagtaagaccagaggagcaa
cagaatggggagcctgctgctgcaacagtggacatgggtgccctcgagcttgagttggtc
aatcgtgccatcgaggcggtacgcagtgaggtggagcgggaaaagaagaagctctcacaa
atcggggacctggaatatgacccttctgccagttctcctaaagtgttgctgaaaccactc
tcacaaactggagaccagaaatatgaccctactgccagttcccccaagctggtgccaaaa
ccaccatcacgatttggggaccaggaatatgatcctactgccagttcccccaaagtgatg
gctaactggccaaaaccacaggccgtggcatcccacttggcgtatgacccaggcagttat
cagatgactacaacagctgattataatcccacccctcgctccagtaagtacaccttggac
tctgacagcaaggacaaccatgccagctccatggaatatgtgcccacctcggttaccaaa
acagctttgaaaaggcctgctcctcgaacacgatctcctcatctaccctctccccctact
agtcctaagtactccaataatgcggccttctccaagaacaagtacacagtggataattct
aaaccatccacagacatggaatatgaccctctctccaactattcagctaaaattgctgtc
aaggataagaaagaccagaggacaggtgcttctaagggagaagtgaaaaaaagacctcac
ctgtcagggacaggaaagctgtcaacggatgaggaatatgtgccaaccactaagaagcct
cgacaggtgataccagacccactgaagtacactgccagtttctctgagtctgatgaggag
agctctgggacagagtatcgacccacttctctcagccgtctgcagaggaggaagagtagc
agtgggtcagtggaggaagcctttggtccagggaaaggagagaggactgaaagagctcta
ggtgggctgaaacaacagaggagtcgggaggctaaagagcaggaagactcggagaaccag
gaagtagcaaggcaaaaagacaaaccagaaactgaaaaagtgccaggtaaaaccagccac
atgaagagcatcaaagtagagaaggtgcataaatctgaaaaggagtccagtaaaaagagt
ggtagtagtaaagaaaaaggagcaggggacggtaagaaaataagtgattcaaagacatca
agccacgaaaccgcaaagaaggacagcaagaatcagggaaagaaagaagaggagaaaagc
aagataaaggataaatccatagacaaaggcaaggagggacaggaagaaaagagaagtgat
gtaaagagtaagctaaggacagacaaagtaaaaggggcgtcaagcaagagtgagagagaa
aaggggggtggggatagtaaaaaactgaagacttcagacaaggaaaaggactcttcaaag
tttaaagaacacaagaatggtaaacatgacagcagtggaagagaaaggggctccaataaa
gttagcaaagggagttctaacagcagtaaagacaaggtgaagaaaacaggtggcaaaaca
ggaaaggtgaaacaaagatctctgagtcacgtggatctgtttggggatgagagtgcagag
gagaaacgcgaggaggatgacgaggaggagaaaattgtgaggaagtcagctgctgctttc
aagagggggcattttaataagaggaatgcctcagagctcaccccctcatcctcagaggat
gatgacgttggtccagaggatgacagaggctatgatgacatggatggtggtggggtggac
tactccggtctgcagatggacatggactttgacctggatgaagacccaatggaggagtgc
ttacggatcttcaatgaatccaaggatgtgaagaccgaggacaagggaaggcaagccaag
ccctctaaagattctgatgatgaggatgacacagatagcaatcaaactactctctttcct
gggcagaagaagagggtttcacatttctccgccaaaggaagtactgaggcaacaccaaag
cctccgccgtacaggagactgactgcccaggagatctgttaccagcgcatgcagattgcc
cagcagcaggcctctcagcttgcagcagccgtgaagactgcctctacacccagacccagg
ccaagcctcagccccttccctggggagaggaagagagtagcccaccgccccaccccctta
ccatcctcctccaagtctggtcttgtcgaggcaaagctagcaggcagcagagtgttgtcg
cccaccaggactctcccaggtggtgtctctgtgaaggcccagacatcagccggcatcttg
tcaaagaccaccaccactattgcacagaagagggtggcacacactcccacaatgaagagc
tctgcaatgaagcgcccagtgattcccactgagtttggagccaaagtgcccaccaacgtc
cgccagcgatacctcaacaactttatagatgagtgtatgaagttctgcccctctgaagac
ttggccttccaaatggccctggaggaggaaaaggtggtgtatgaccggagcagcagtaag
aacatctacctcaacgtggcagtcaacacactgaagaagctacgcagcaagagcagctcc
cccacctcacccgttgccaggagccctgcagtggtggggaacatgaaggcccagtcccat
gaggaagtgctggggggacgcctcgctgccaagaccagcttcaccatcaacaggactggc
aagcaacaggaggagaaactcagtggtgtcaggctgtacaggaagctgagggactatctg
atgacggaggagcagctgcaggagcatggataccccaggccacaccctgagcgctcaggt
cgagccgtggtccacaacgtcccggaaaagaagaatgttgacccttttgccaaggtgtgc
tgtcgatgtggggcagagtataagatcaacgccaacggcaactgtgttcgcaaggaggag
tgtaatcatcactggggccgtctgcgcagacataaagtgtcgggaggctgggagaccaac
tacagctgctgctcagggactgtgggctctcctggctgctctgtgtctaagcaacacgtt
caggacggacgtaaagaatcattggacggctatgttcagacctttgagaaacagctgccc
ccagatggcaacggtggagtctacgccctggactgtgagatgtgttacacaaagcagggt
ctggagctgaccagggtgactgttatcaactctgagctgaaagtcatctatgacacattt
gtcaaacccgaaagcaaagtggttgactacaacacacggttttcgggtgtaacagaggag
gacctggagaatgcgaccatcaccctgagagacgtgcaggctgtgatcctcaacatgttc
agcactgagtccatcctcataggacacagcctggagagtgacctctttgccctcaaggtc
atacacagcactgtagtagacacagccattgtgtttccccatcgcctgggcttgccatac
aagagggccctgaggaacctcatggcagaccacctcaaacgcatcatacaggacagcgtt
gaaggtcatgactccagtgaggacgcctgcgcctgcatggagctcatgatatggaagatc
cgagaagacgccaaggtgaagagatga
DBGET
integrated database retrieval system