KEGG   Oncorhynchus kisutch (coho salmon): 109902575
Entry
109902575         CDS       T09179                                 
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109902575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oki03009]
    109902575
Ribosome biogenesis [BR:oki03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    109902575
SSDB
Motif
Pfam: EloA-BP1 RNase_T
Other DBs
NCBI-GeneID: 109902575
NCBI-ProteinID: XP_020354624
Ensembl: ENSOKIG00005040161
LinkDB
Position
LG13:complement(33351937..33362345)
AA seq 1308 aa
MLRSTGFFRGIDCPFYTDSCNGKSGKYGCNRPYCHFRHSKHRRASYGSNDTRTSKELYSK
QKEQGGYDPFNPEVVRPEEQQNGEPAAATVDMGALELELVNRAIEAVRSEVEREKKKLSQ
IGDLEYDPSASSPKVLLKPLSQTGDQKYDPTASSPKLVPKPPSRFGDQEYDPTASSPKVM
ANWPKPQAVASHLAYDPGSYQMTTTADYNPTPRSSKYTLDSDSKDNHASSMEYVPTSVTK
TALKRPAPRTRSPHLPSPPTSPKYSNNAAFSKNKYTVDNSKPSTDMEYDPLSNYSAKIAV
KDKKDQRTGASKGEVKKRPHLSGTGKLSTDEEYVPTTKKPRQVIPDPLKYTASFSESDEE
SSGTEYRPTSLSRLQRRKSSSGSVEEAFGPGKGERTERALGGLKQQRSREAKEQEDSENQ
EVARQKDKPETEKVPGKTSHMKSIKVEKVHKSEKESSKKSGSSKEKGAGDGKKISDSKTS
SHETAKKDSKNQGKKEEEKSKIKDKSIDKGKEGQEEKRSDVKSKLRTDKVKGASSKSERE
KGGGDSKKLKTSDKEKDSSKFKEHKNGKHDSSGRERGSNKVSKGSSNSSKDKVKKTGGKT
GKVKQRSLSHVDLFGDESAEEKREEDDEEEKIVRKSAAAFKRGHFNKRNASELTPSSSED
DDVGPEDDRGYDDMDGGGVDYSGLQMDMDFDLDEDPMEECLRIFNESKDVKTEDKGRQAK
PSKDSDDEDDTDSNQTTLFPGQKKRVSHFSAKGSTEATPKPPPYRRLTAQEICYQRMQIA
QQQASQLAAAVKTASTPRPRPSLSPFPGERKRVAHRPTPLPSSSKSGLVEAKLAGSRVLS
PTRTLPGGVSVKAQTSAGILSKTTTTIAQKRVAHTPTMKSSAMKRPVIPTEFGAKVPTNV
RQRYLNNFIDECMKFCPSEDLAFQMALEEEKVVYDRSSSKNIYLNVAVNTLKKLRSKSSS
PTSPVARSPAVVGNMKAQSHEEVLGGRLAAKTSFTINRTGKQQEEKLSGVRLYRKLRDYL
MTEEQLQEHGYPRPHPERSGRAVVHNVPEKKNVDPFAKVCCRCGAEYKINANGNCVRKEE
CNHHWGRLRRHKVSGGWETNYSCCSGTVGSPGCSVSKQHVQDGRKESLDGYVQTFEKQLP
PDGNGGVYALDCEMCYTKQGLELTRVTVINSELKVIYDTFVKPESKVVDYNTRFSGVTEE
DLENATITLRDVQAVILNMFSTESILIGHSLESDLFALKVIHSTVVDTAIVFPHRLGLPY
KRALRNLMADHLKRIIQDSVEGHDSSEDACACMELMIWKIREDAKVKR
NT seq 3927 nt   +upstreamnt  +downstreamnt
atgctgagatccaccggtttcttccgtggaattgactgcccgttttacacggatagctgc
aatgggaaaagcggcaaatatgggtgcaacagaccatactgccacttcagacacagcaaa
catagacgtgcgtcttatggctcaaatgacactagaacatcaaaagaactttactccaaa
caaaaggaacaaggtggctatgacccattcaacccagaggtagtaagaccagaggagcaa
cagaatggggagcctgctgctgcaacagtggacatgggtgccctcgagcttgagttggtc
aatcgtgccatcgaggcggtacgcagtgaggtggagcgggaaaagaagaagctctcacaa
atcggggacctggaatatgacccttctgccagttctcctaaagtgttgctgaaaccactc
tcacaaactggagaccagaaatatgaccctactgccagttcccccaagctggtgccaaaa
ccaccatcacgatttggggaccaggaatatgatcctactgccagttcccccaaagtgatg
gctaactggccaaaaccacaggccgtggcatcccacttggcgtatgacccaggcagttat
cagatgactacaacagctgattataatcccacccctcgctccagtaagtacaccttggac
tctgacagcaaggacaaccatgccagctccatggaatatgtgcccacctcggttaccaaa
acagctttgaaaaggcctgctcctcgaacacgatctcctcatctaccctctccccctact
agtcctaagtactccaataatgcggccttctccaagaacaagtacacagtggataattct
aaaccatccacagacatggaatatgaccctctctccaactattcagctaaaattgctgtc
aaggataagaaagaccagaggacaggtgcttctaagggagaagtgaaaaaaagacctcac
ctgtcagggacaggaaagctgtcaacggatgaggaatatgtgccaaccactaagaagcct
cgacaggtgataccagacccactgaagtacactgccagtttctctgagtctgatgaggag
agctctgggacagagtatcgacccacttctctcagccgtctgcagaggaggaagagtagc
agtgggtcagtggaggaagcctttggtccagggaaaggagagaggactgaaagagctcta
ggtgggctgaaacaacagaggagtcgggaggctaaagagcaggaagactcggagaaccag
gaagtagcaaggcaaaaagacaaaccagaaactgaaaaagtgccaggtaaaaccagccac
atgaagagcatcaaagtagagaaggtgcataaatctgaaaaggagtccagtaaaaagagt
ggtagtagtaaagaaaaaggagcaggggacggtaagaaaataagtgattcaaagacatca
agccacgaaaccgcaaagaaggacagcaagaatcagggaaagaaagaagaggagaaaagc
aagataaaggataaatccatagacaaaggcaaggagggacaggaagaaaagagaagtgat
gtaaagagtaagctaaggacagacaaagtaaaaggggcgtcaagcaagagtgagagagaa
aaggggggtggggatagtaaaaaactgaagacttcagacaaggaaaaggactcttcaaag
tttaaagaacacaagaatggtaaacatgacagcagtggaagagaaaggggctccaataaa
gttagcaaagggagttctaacagcagtaaagacaaggtgaagaaaacaggtggcaaaaca
ggaaaggtgaaacaaagatctctgagtcacgtggatctgtttggggatgagagtgcagag
gagaaacgcgaggaggatgacgaggaggagaaaattgtgaggaagtcagctgctgctttc
aagagggggcattttaataagaggaatgcctcagagctcaccccctcatcctcagaggat
gatgacgttggtccagaggatgacagaggctatgatgacatggatggtggtggggtggac
tactccggtctgcagatggacatggactttgacctggatgaagacccaatggaggagtgc
ttacggatcttcaatgaatccaaggatgtgaagaccgaggacaagggaaggcaagccaag
ccctctaaagattctgatgatgaggatgacacagatagcaatcaaactactctctttcct
gggcagaagaagagggtttcacatttctccgccaaaggaagtactgaggcaacaccaaag
cctccgccgtacaggagactgactgcccaggagatctgttaccagcgcatgcagattgcc
cagcagcaggcctctcagcttgcagcagccgtgaagactgcctctacacccagacccagg
ccaagcctcagccccttccctggggagaggaagagagtagcccaccgccccaccccctta
ccatcctcctccaagtctggtcttgtcgaggcaaagctagcaggcagcagagtgttgtcg
cccaccaggactctcccaggtggtgtctctgtgaaggcccagacatcagccggcatcttg
tcaaagaccaccaccactattgcacagaagagggtggcacacactcccacaatgaagagc
tctgcaatgaagcgcccagtgattcccactgagtttggagccaaagtgcccaccaacgtc
cgccagcgatacctcaacaactttatagatgagtgtatgaagttctgcccctctgaagac
ttggccttccaaatggccctggaggaggaaaaggtggtgtatgaccggagcagcagtaag
aacatctacctcaacgtggcagtcaacacactgaagaagctacgcagcaagagcagctcc
cccacctcacccgttgccaggagccctgcagtggtggggaacatgaaggcccagtcccat
gaggaagtgctggggggacgcctcgctgccaagaccagcttcaccatcaacaggactggc
aagcaacaggaggagaaactcagtggtgtcaggctgtacaggaagctgagggactatctg
atgacggaggagcagctgcaggagcatggataccccaggccacaccctgagcgctcaggt
cgagccgtggtccacaacgtcccggaaaagaagaatgttgacccttttgccaaggtgtgc
tgtcgatgtggggcagagtataagatcaacgccaacggcaactgtgttcgcaaggaggag
tgtaatcatcactggggccgtctgcgcagacataaagtgtcgggaggctgggagaccaac
tacagctgctgctcagggactgtgggctctcctggctgctctgtgtctaagcaacacgtt
caggacggacgtaaagaatcattggacggctatgttcagacctttgagaaacagctgccc
ccagatggcaacggtggagtctacgccctggactgtgagatgtgttacacaaagcagggt
ctggagctgaccagggtgactgttatcaactctgagctgaaagtcatctatgacacattt
gtcaaacccgaaagcaaagtggttgactacaacacacggttttcgggtgtaacagaggag
gacctggagaatgcgaccatcaccctgagagacgtgcaggctgtgatcctcaacatgttc
agcactgagtccatcctcataggacacagcctggagagtgacctctttgccctcaaggtc
atacacagcactgtagtagacacagccattgtgtttccccatcgcctgggcttgccatac
aagagggccctgaggaacctcatggcagaccacctcaaacgcatcatacaggacagcgtt
gaaggtcatgactccagtgaggacgcctgcgcctgcatggagctcatgatatggaagatc
cgagaagacgccaaggtgaagagatga

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