Oncorhynchus kisutch (coho salmon): 109902600
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Entry
109902600 CDS
T09179
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109902600 (fxr1)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109902600 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
109902600 (fxr1)
mRNA cycle factors
Stress granule specific factors
109902600 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXR_C1
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH-I_KHDC4-BBP
DUF7617
Tudor_2
Motif
Other DBs
NCBI-GeneID:
109902600
NCBI-ProteinID:
XP_020354671
Ensembl:
ENSOKIG00005034123
UniProt:
A0A8C7IYX5
LinkDB
All DBs
Position
LG13:complement(32269595..32285172)
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AA seq
677 aa
AA seq
DB search
MHCMPNMDELTVEVRGSNGAYYKGFVKDVHDDSLAIAFENNWQPERQVPFSDVRMPPPAD
GKKDIGEGEEVEIFSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRP
VNINKAVSKSSFFKCTVPVPDDLKAACESEQAHKDFKKAVGACRIVYCSETSSLVVLSIN
EATVKRVSLLSDMHLRSIRTKLMLMSRNEEATKHLESTKQLASGFQEEFTVRVDLMGLAI
GSHGSNIQQARKLPGVTAIELDEGSGTFRIYGENEEAVKKARNYLEFLEDSVQIPRNLVG
KVIGKNGKVIQEIVDKSGVVRVRIEGDKDGTQPRQETQGMVPFTFVGTKENIGNVQVLLE
YHIAYLNEVEQLRMERLQIDEQLRQIGMGHRPSSGRPADKGYTTDDSVAATAVHTSRSYT
GRGRGRRGPNYTSGYGTNSEQSNASETDSERKDELSDWSLAGEEPERGTRQQRDSRRRAG
PGRGRGPRGRGAGRGAPNTALKDPYGNPYSVLDNTETDQTADTDASDSNLNTNRRRRSRR
RRTDEDTTVIDGMSESDNASLSENSLDDSKAKPQRRNRSSRRSVRPPEEKQPVTVADYIS
RAESQSRQTNQKELKKNKKELGQVECIAEHSLSAEANTSNGPSNGRGDEPGRASTEQVAK
VTYQGNGDQQPVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcatgcccaacatggatgaactgacggtggaggtccgtggctccaacggagca
tattataagggatttgtcaaagatgtccatgacgattcactcgctattgcctttgagaac
aattggcaaccagagagacaagttccctttagtgatgttcggatgccacctccagccgat
ggtaaaaaggacatcggggagggagaagaggtggagatcttctcccgggccaatgagcag
gagccatgtggctggtggcttgccaaagtgcgcatgatgaagggagatttctatgtgatc
gagtatgctgcctgtgacgccacatacaatgaaatagtcacatttgaacgtcttcggcct
gtaaatatcaacaaggcggtgtcaaagagctccttcttcaagtgcacagtcccagttccc
gacgacctgaaagcagcgtgcgaaagtgaacaagcgcataaagatttcaaaaaggcagtg
ggagcttgtcggattgtctactgttcagaaacaagtagcttggttgtactgtccataaat
gaagccacagttaagcgagtgtctttgctcagtgacatgcacctgaggagcattcgtact
aagctcatgctcatgtcccgaaatgaggaggccactaaacatctggagagtacaaagcaa
ctggcatctggtttccaagaggagtttacagtcagggtggacctcatgggccttgccatt
ggaagccatggaagcaacattcaacaagccagaaaactgcctggagtcactgctatcgag
ctggatgaggggagcgggacgttcagaatttacggagagaatgaggaggcagttaagaag
gcaaggaattatctggagtttcttgaagattctgttcagatccccaggaacttggtcggc
aaggtaattggcaagaatgggaaagtcattcaggagatcgttgacaagtctggagtggtg
agagttaggattgaaggggacaaggatggcacacagccacgtcaagaaacacagggaatg
gtcccgtttacatttgtcggcactaaggagaatattgggaatgtccaggtacttctggag
taccacattgcctacctgaacgaagtcgagcagctgcgtatggagagactgcagatagat
gagcagctgaggcagattgggatgggccacaggccttcatctggccgcccagcagacaag
ggctacaccacagacgacagtgtggctgctaccgccgtgcacaccagccgctcctacacc
ggcagaggccgcggacgcaggggccccaactacacctccggctatggcacaaactctgag
caatccaatgcctctgagactgactctgagcgtaaggatgagctgagtgactggtccctg
gcgggagaagaaccggagagggggactcgacaacagagagacagcaggaggagagctggt
ccagggaggggtagagggcccaggggccgtggagcagggagaggagcccccaacaccgct
ctgaaggatccttatggcaacccatacagtgtgcttgacaacacagagacagaccagacg
gctgacactgatgcaagcgactccaacctcaacacaaaccgccgccgccgctcccgccgc
cgtcggactgacgaggacacaacagtcattgatggcatgagtgaatcagataacgcttcc
ctcagtgagaatagccttgatgactcaaaagctaaaccgcaacggcgtaaccgtagcagc
agacgcagtgtccgcccaccagaggaaaagcaaccagttacagtggcagattacatatcc
cgtgctgaatcacaaagcagacagactaaccaaaaagaactgaaaaagaacaaaaaagaa
ctggggcaggttgagtgtatcgcggagcacagcctatctgcagaagcaaatacaagcaac
ggacccagcaatggaagaggtgacgaaccaggcagggcttccacagaacaggttgccaaa
gtcacttaccaagggaatggtgaccagcagcctgtcctgaacggggtttcctaa
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