Oncorhynchus kisutch (coho salmon): 109902639
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Entry
109902639 CDS
T09179
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03030
DNA replication
oki03410
Base excision repair
oki03420
Nucleotide excision repair
oki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109902639
03410 Base excision repair
109902639
03420 Nucleotide excision repair
109902639
03430 Mismatch repair
109902639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oki03032
]
109902639
03036 Chromosome and associated proteins [BR:
oki03036
]
109902639
03400 DNA repair and recombination proteins [BR:
oki03400
]
109902639
DNA replication proteins [BR:
oki03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109902639
DNA Replication Termination Factors
ELG1-RFC complex
109902639
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109902639
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109902639
Check point factors
HRAD17(Rad24)-RFC complex
109902639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_22
AAA_30
AAA_assoc_2
Mg_chelatase
AAA_11
DUF815
RuvB_N
AAA_24
SLFN-g3_helicase
AAA_14
AAA_28
AAA_5
Gp44_lid
AAA_19
Cdc6_lid
ResIII
AAA_7
ATPase_2
RPA_interact_N
Kinesin
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
109902639
NCBI-ProteinID:
XP_020354753
Ensembl:
ENSOKIG00005018589
LinkDB
All DBs
Position
LG13:29886205..29893904
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGTGTSGEKKQKSVPWVEKYRPKCMEDVAFQEEVVAVLKKTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANQVQEERLLDICDKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITESAVIEIAGVVPPKMIDNLLKICYKGTFEKLEIAVGNMVDEGYAATQI
INQLHEAIIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQMLSMCSVIMQQATLSN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatcaactcaaggcaccagacctctgaaagagaaaggt
acagggaccagtggagagaagaagcagaaatctgtcccctgggtagagaaatatagacca
aaatgtatggaagacgtggcgtttcaagaggaggtggttgctgtgctgaagaagactata
gagggcgctgatctccccaatctgctgttctatggaccacctggaacaggaaagacctcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgtcagagagtgctg
gagctgaacgcctctgatgagagagggattcaggtggtgagagagaaagtcaagagattt
gcccagctgactgtagcaggccaccgcactgatgggaaaccatgcccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaatgctgctcaggctgctctcagacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactacgtcagcaggatt
attgagcccttgacatccagatgctccaaattccgcttcaaacctctagcaaatcaggtc
caagaagagcgcctgctggatatctgtgacaaggagaatctcaagtactcaaaggagggt
attgcagcgttggtgaaggtttcagaaggggatcttagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacggagagtgcggtcatagagatagct
ggggtggttcctcccaagatgattgacaatttgctcaaaatctgttacaagggaacattt
gaaaaactagagattgctgttgggaacatggtagatgagggctatgctgccacacagatc
atcaaccagctacacgaagccatcatagaggaagagctgaatgacaagcagaagtctgcc
atcacagaaaagatggcagtggtcgacaagtgtttagtggatggtgcagatgagtacctg
cagatgctgagtatgtgttcggtgatcatgcagcaagccactctgagtaactga
DBGET
integrated database retrieval system