Oncorhynchus kisutch (coho salmon): 109902642
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Entry
109902642 CDS
T09179
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00601
Glycosphingolipid biosynthesis - lacto and neolacto series
oki01100
Metabolic pathways
Module
oki_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
oki_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109902642
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109902642
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
109902642
Glycosyltransferases [BR:
oki01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
109902642
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
109902642
NCBI-ProteinID:
XP_020354759
Ensembl:
ENSOKIG00005018571
LinkDB
All DBs
Position
LG13:29791105..29797518
Genome browser
AA seq
372 aa
AA seq
DB search
MFMNFRRMRRCQRVQLVTTGFVLSVLMVCWVQLDHHVENRYLVNSFDFINKSFGISQQES
ESLSNFLYLINHHDKCNSNEVLLLLFVKSSPENLERRQAIRATWGNENYIQRELGANVRV
LFALGVYSNPQQRGSVQRGLLGEDQVYGDLVQQDFVDTFHNLTIKLLLQFRWRHTYCSKA
RFLMSADDDIFVHMPNLVHYLQGLIQQGARDLWVGHVHRGAPPIRQKDSKYHVPYEMYQW
PSYPDYTAGAGYVVSRDVAAKIYQATLFLNASLYIDDVFMGICANAMGVSPQEHVYFSGE
GKAPYHPCIYDKMITSHGHVADVRRLWKAAMDPQIHDISSGQVGKLYCTAVKIMLLCKPY
YLNTYPCKAAFS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgaatttcagaaggatgagaagatgtcaacgtgtgcagctggtgacgacaggc
tttgtcctgtctgtgttgatggtgtgctgggtgcagctggaccaccatgtggagaaccgt
tacttggtcaacagctttgacttcatcaacaagagctttggcatcagccagcaggagtcg
gaaagcctgagcaacttcctgtacctcatcaaccaccatgacaagtgtaacagcaatgaa
gtgctgctgctgctgtttgtcaaatcttccccagagaatctggagaggaggcaggccatc
cgggccacctgggggaatgagaactacatccaaagggagctgggggccaacgtgagggtg
ctgtttgccctgggggtctactccaacccccagcagaggggcagtgtgcagagagggctg
ctgggggaggaccaggtctatggggacctggtccagcaggactttgtggacacctttcac
aacctcaccatcaaactgctgctgcagttccgctggagacacacctactgcagcaaagca
cgcttcctcatgtcagccgacgacgacatctttgtccacatgcccaacctggtgcactac
ctgcagggcctgatccagcagggggcccgggacctctgggtgggccacgtgcacagggga
gccccccctatccgccagaaggacagcaagtaccacgtgccttatgagatgtaccagtgg
ccctcctacccagactacaccgcgggggcagggtacgtagtctcaagggatgtggctgcc
aaaatctaccaggcaactctgttcctcaatgcctcgctgtacattgacgatgtgttcatg
ggcatctgtgccaacgccatgggggtgtctccccaggaacatgtttacttttcaggggaa
gggaaggccccctatcacccctgcatctatgataagatgatcacctctcacggacatgtg
gcagacgtccggcgcctgtggaaggcagctatggacccacagattcatgacatttcctct
ggccaggtgggaaagctgtactgcacagcagtgaaaatcatgctcctctgtaaaccttac
tatttaaatacctacccatgcaaggcagccttttcataa
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