Oncorhynchus kisutch (coho salmon): 109902649
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Entry
109902649 CDS
T09179
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00280
Valine, leucine and isoleucine degradation
oki01100
Metabolic pathways
Module
oki_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
109902649
Enzymes [BR:
oki01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
109902649
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_ST
Biotin_lipoyl_2
BT_MCC_alpha
RimK
ATP-grasp_3
ATP-grasp_4
Ntox43
NQRA_N
RnfC_N
DUF6535
Motif
Other DBs
NCBI-GeneID:
109902649
NCBI-ProteinID:
XP_020354777
Ensembl:
ENSOKIG00005022948
LinkDB
All DBs
Position
LG13:complement(28584292..28592191)
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AA seq
721 aa
AA seq
DB search
MASVLNVQTLQGLRIFQQSVSCLVLLLSHLRKLIWTKGFVRFASIWQGRIEKVLVANRGE
IACRVMRTAKKMGVRSVAVYSDADRHSMHVAMADEAYNIGPAASQQSYLSMEKVMEVAKR
SGSHAVHPGYGFLSENTEFAEACKQEGIIFIGPPSSAIRDMGIKSTSKYIMSAAGVPIIE
GYHGEDQSDEKLQAEAVRIGYPVMIKAVRGGGGKGMRIAHTAEDFHEQLESARREARKSF
NDDVMLVEKFVEDPRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISKEVR
RKLGEAAVRAAKAVNYVGAGTVEFIMDAQHNFFFMEMNTRLQVEHPVSEMITGTDLVEWQ
LRVAAGERLPLLQEEIELMGHSFEARIYAEDPNNDFLPGAGPLLHLSTPLADECTRIETG
VREGDEVSAHYDPMIAKLVVWGEDRSAALRKLRYCLRQYNIVGLNTNIDFLLSLSGHPEF
EAGNVTTSFIPQHYEQLFPKPSPPSRATLCQAALGLLLRERASTQTFRDQSNDPFSPFAS
SNGRRVNILYSMNMMLQLGETKVELTVTYNPDGTYSMEIGGEVFQVSGEVETEGQTSFLH
CSVNGVKSRPKLVILDNTVHLFSMEGSAEVSIPVPKFLAGVSTGAQGGAVAPMTGTIEKV
LVKAGDTVQMGDSLMVMNAMKMEHIIRAPKAGIIKKVFFKDGSQANRHAALVEFEEAAEE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtcctgaatgttcaaaccctacagggtttaagaatatttcaacagtccgtg
tcctgccttgttcttttattatctcatcttaggaaattgatatggaccaaaggatttgtg
cggtttgcctcaatttggcaaggcaggatagaaaaagtcctcgttgccaacagaggagaa
atcgcctgccgtgtgatgcgaacagcaaagaagatgggtgtgcgctctgtggcagtatac
agtgatgcagatcgtcattccatgcatgtggccatggcagatgaggcctataacattggg
ccagccgcatcccagcagagttacttgtccatggagaaagtcatggaggttgccaagaga
tctggatcacatgctgtccacccaggatatggcttcctgtcagagaacacagagtttgct
gaggcatgcaaacaggagggtatcatctttattggccctccatcatctgctatcagagac
atgggtatcaaaagtacatcaaaatacataatgtcagctgcgggtgttcctatcatcgag
ggttaccacggagaggaccaatcggatgagaagctccaagctgaggctgtcaggataggc
tacccagtgatgataaaggctgtgcgtggcgggggtggtaaaggaatgcgcattgcacac
accgctgaagacttccacgagcagcttgagtctgcgagacgagaggctcgcaagtccttc
aatgatgatgtcatgctagtggagaaatttgtagaggaccccagacatgtggaggtccag
gtttttggggaccagcatggaaatgctgtctacctgtttgagagggattgcagcgtgcag
agaaggcaccagaagatcattgaggaagcaccaggtcctggaattagcaaggaggtgagg
cggaaactgggtgaggcagccgtgagagcagccaaagctgtcaactatgtgggagcaggc
actgtggagttcatcatggatgcacagcacaacttcttcttcatggagatgaacacgcgt
ctgcaggtggagcaccctgtgtctgagatgatcactggtactgacctggtggagtggcag
ctcagggtggctgcaggcgagaggctgcccctcctgcaggaggagatagaactgatgggc
cattcgtttgaggccaggatatacgctgaggaccccaacaacgacttcctccctggggca
ggacccctccttcatctgtctacacccctggcagacgagtgcacacgcatcgagacaggc
gtcagggaaggagatgaagtgtcagcccactacgaccccatgatcgctaaactggtggtg
tggggagaggaccgctctgctgctctgaggaagctcagatactgcttacgtcagtacaac
attgtaggcctcaacaccaatattgacttcctgctgagtctgtctggccacccagagttt
gaggcggggaatgtgaccaccagcttcatcccccagcactatgagcagctgttccccaag
cccagccctccctccagggccacactgtgtcaggctgccctgggcctgctgctcagagag
agggccagcactcaaaccttcagagaccagtccaacgatcccttctctccttttgcctcc
agtaacggcaggagggtgaacatcctatatagtatgaatatgatgctccagctgggtgaa
actaaagtggaattaacggttacatataatccagatgggacctactctatggagattgga
ggggaagtgttccaggtgtcaggggaggtggagacagagggacagacatccttcctgcac
tgctctgtgaacggggtgaagtcccggcccaaactggtcatcctggataacacagtacac
ctcttctctatggagggtagtgcggaggtgagcattccagtgccaaagttcctggctggt
gtgagcacaggagcacagggaggagctgtggcacccatgactgggaccattgagaaggtg
ctggtgaaggcaggagacacagtgcagatgggagactccttgatggtgatgaatgccatg
aaaatggagcacatcatccgagcacccaaagctggaatcatcaagaaggtgtttttcaag
gatggctcccaggccaaccggcacgcagccctggtagagtttgaggaggccgctgaggag
gaataa
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