Oncorhynchus kisutch (coho salmon): 109902707
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Entry
109902707 CDS
T09179
Name
(RefSeq) palladin-like isoform X1
KO
K22029
palladin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109902707
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109902707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
C2-set_3
Unc5_NetrinR_N
Motif
Other DBs
NCBI-GeneID:
109902707
NCBI-ProteinID:
XP_031641715
Ensembl:
ENSOKIG00005010206
LinkDB
All DBs
Position
LG13:25861746..25983489
Genome browser
AA seq
1659 aa
AA seq
DB search
MQDGRWNQSLPLSLLMKDGGRVLEGDGGVFSETSSDGDLYLDSMADMDAGVGDFSDLTAF
LSQDEINRSLDLAREAFSDAEDRGVTVSPIPRTQEPALYFPSPTPFNTTEYLTKSPSFPH
QTKAHSPDDSHSVKVTSSQSFHLSRPIQTTCEAMALPEKFVCHKNITPVYKQDKPRLVHE
GLELNERAASATEFCSRAATFIEELSSIFKGSARPEQMGEEDSSSPDSGYLSPKSHWLGP
QGSASVPPQPLIQQGAPQQCEPGLGIQPASMMGGMGVTGVPSLSVTGVPIVSNLMSVNEL
MGKQQHSGAQLMGKQQHSGAQLMGKQQHSGAQLMGKQQHSGAQLMGEQQHSGAKLMGEQQ
HSGAPLMGKQQHSGAQLMGEQQHSGALLMGKQQHSGAMLMGEQHSGAKLMGEQHSGAKLM
GKQQHSGAKLMGEQQHSGAQLMGEQQHSGAQLMGEQQHSGAQLMGEQRHSGAQLMGQQQH
SGAQLMGEKLSGAQSVDGDLSLPHFTQKLKSQEVAEGHPIQLECRVAGNPQPLVRWFCEG
RELHHCPDIQIWRDGALHTLVIAEAFEDDTGRYTCVASNSLGADNTSAEVYIQGASSSDS
EGEVSKSRSGAMPQVQKKTTSISLSIRSPSPKSPEVVPHRSTLVLSAPPHRMQSPVSSLY
GGGGPLTAPPIFTKLLQNAQASEGQVVVLECRVRGSFPLQVQWSRQGQVIQDSPDFRILQ
KKPRSAAEPEEICTLVIAEAFPEDGGQFCCTATNLYGSVSSTAQLSVTGGAFNTPTAVYD
SVRNGVAPGDDSVFEDTQAFPPPPPTEISLLEVPPKVPPSTCAEGFHVNELEIWPSMSGL
QPVHMYHDVEGQDRANWALQNGRPASPSQPTFSLLPREAQPDFPGPAKMSPPPVKEGPPL
PTKPKLAEGIEEETEHDRNAEQLKQLQDQIILEQQEAANWIQHQEQEQEVPPLPQQPPEV
PSLPSLPLPPPPSFQELESSAMQTSTFNYARPKQFIAAQSPGGTGPMGGYVTQSSGSSGS
SLPSPLSPPTSQKPFTRVVLPPFSKGGSIESQSPSSPSFPPPPPPFLSSSISSLSGPAKD
FPPPPPPPPPPVSSAPPYSLAHSNSSSPFTSMPQSPAGFLASVLPATPTSPSFNALGLPK
GNGTISAFPRKQSRGTPRLASDSDIQGTKDAVIQDLERKLRFKEERMSNGQQRLTYEEKM
ARRLLGADNAATVLNTQQQDEEPVTQDSSSSDIESVPQKEYKVSSFEQRLISEIEFRLER
SPVEESDDDVQHDENATGTGVVPFFDSKLKHYKVFEGMPVTFSCKVIGDPKPKIYWFKDG
KQISKRSEHYRISRDADGTCNLHTAAASLDDDGNYTIMAGNPEGRVSCTGRMMVQAVNQR
GRSQRSAPGHIRRPRSRSRDSGDENENIQERHFRPHFLQAPGDLIVQEGRLCRMDCKVSG
LPTPDLIWQLNGQTIRPDSAHKMLVRENGVHSLVIEPVSSRDAGIYTCIASNRAGQNSFN
LELIVAAKEMHKAPSFIEKLQNTGVAEGYPVRLECRVSAVPYPQIFWKKENESFTHNTDR
ISMHQDNCGYLCMIIQPAMKEDAGWYTVSAKNEAGIVSSTARLDVHTQWQQPNTPKPKKV
RPSTSRYAALTERGLDVKAAFFPDSSPLQPGGLVESDDL
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgggagatggaatcagtccctccccctctctctgcttatgaaggatgggggc
agggttctagagggagacggaggggtgttctcagagacgtcgtctgatggggatctatac
ctggactctatggcggatatggacgccggagttggggacttttcagatcttaccgccttc
ctcagccaagacgagatcaaccgcagcctggacctggctcgggaggccttcagtgatgca
gaagaccggggagtcactgtctctcctattcccagaacccaggagccggctctctacttc
ccctcccccacccccttcaacaccacagaatacctgaccaaaagccccagcttcccccac
caaaccaaagcccactccccagatgacagtcactcagtcaaagtcacctccagccagagt
ttccacctcagcaggcccatacagaccacatgtgaagccatggccttgcctgagaagttt
gtctgccacaagaacatcaccccagtctataagcaggacaagccccgactggtccacgag
ggcttagagctgaatgaacgggctgcctccgccactgagttctgtagccgtgctgccacc
ttcatcgaggagctgtcctctatctttaaaggctccgcccggccggagcaaatgggggag
gaagactcctcctctcccgacagcgggtatctgtctcctaagagccactggctgggcccc
cagggctctgcctctgtccccccacagcctctcatccaacagggggcaccacagcagtgt
gagccaggcttgggtatccagccagcaagcatgatgggtggaatgggtgtgacgggtgtc
ccttctctgagtgtgacgggggttccaattgtctccaatctgatgagtgtgaatgagttg
atggggaagcagcagcacagtggagcccagttgatggggaagcagcagcacagtggagcc
caattgatggggaagcagcagcacagtggagctcagttgatggggaagcagcagcacagt
ggagcacagttgatgggggagcagcagcacagtggagccaagttgatgggggagcagcag
cacagtggagctccgttgatggggaagcagcagcacagtggagctcagttgatgggggag
cagcagcacagtggagccctgttgatggggaagcagcagcacagtggagccatgttgatg
ggggagcagcacagtggagccaagttgatgggagagcagcacagtggagccaagttgatg
gggaagcagcagcacagtggagccaagttgatgggggagcagcagcacagtggagcccag
ttgatgggggagcagcagcacagtggagcccagttgatgggagagcagcagcacagtgga
gcccagttgatgggggagcagcggcacagtggagcccagttgatggggcagcagcagcac
agtggagcccagttgatgggggagaagctcagtggagcacagagtgtagatggagacctg
tcactgccacactttacccagaagctgaagagccaggaggtggcagagggacaccccatc
caactggagtgtagggtggcaggaaaccctcagccgctggtcaggtggttctgtgagggg
cgggagctgcaccactgtcctgacatccagatctggagggatggtgccctacatacgctg
gtgatcgctgaggccttcgaggacgacacgggacgctacacctgcgtggcctccaacagc
ctgggggcggacaacacctcggcagaggtctacatccagggtgcttcatcctccgactca
gaaggagaagtgtcaaagtccagatcaggagccatgcctcaggtccagaagaagacgact
tcaatctccctgtccattcgttcaccttcacccaagagccctgaggttgttcctcaccgc
tccaccctggtcctatctgcacccccacaccggatgcagagtccagtttcttcactatat
ggaggtggtggtcctcttacagcgccccctatctttaccaagctcttacagaatgcccag
gcatcagagggtcaggtggttgtgttggagtgcagggttcgaggcagctttcctctgcag
gtccaatggtccagacagggacaggtcatccaggactctccagacttccgcatcctgcag
aaaaagccacggtctgcagcagagccagaggagatctgtacgctggtgatagcagaggcc
ttcccagaggatggaggtcagttctgctgcactgcaaccaacctttacggctccgtcagc
agcacagcccaactctctgtcactggaggggccttcaacactcccacagcggtgtacgac
tcggtcaggaatggtgtggcgcccggggatgactctgtctttgaggacacccaggccttt
ccccctcccccgcccacagagatcagcctattggaggttccgcccaaggtcccacccagt
acctgcgccgagggtttccacgtcaacgagctggagatctggcccagcatgtcgggcctg
cagcctgtccacatgtaccacgacgtggaaggtcaggaccgggccaactgggcactgcag
aacggcaggcctgccagcccctctcagcccaccttcagcctgcttccacgagaggcccag
ccagacttcccaggcccagccaagatgtctccgcccccagtgaaggaaggtcctccactg
cccaccaagcccaaactagcggagggtatagaggaggagacagaacatgacaggaacgca
gaacagttgaagcagctgcaggatcagattatattggaacagcaggaagcagccaattgg
atccaacatcaggagcaagagcaggaagtcccgcctctgccacagcagcccccggaagtg
ccctctctgccttctcttcctcttccccctcctccctccttccaggagctggagagcagc
gccatgcagaccagcaccttcaactacgcccggccaaagcagttcattgctgcccagagc
cctggggggactggccctatggggggctatgtcacccagtcctcagggtcctctggttcc
agcctgccctcccccctctccccacccacctcacaaaaacccttcaccagggttgtcctg
cctcccttcagtaagggcggtagcattgagtctcagtccccttcctctccctccttccca
cctccacctcctcccttcctcagtagcagcatttcatccttgtcaggccctgccaaagac
ttccctccaccccctcctccccctcctccacctgtctcttcggctcccccctactccctc
gcccactccaacagctcctcccccttcacctccatgccccaatcacctgctggcttcctg
gcctctgtccttccagccacacccactagcccatccttcaacgccctgggcctgcctaaa
gggaacgggactatcagtgcttttccccggaagcagtccagaggaaccccacgcctggcc
tcagactctgacatccagggaaccaaggatgctgtcattcaggacctggagaggaagcta
cgattcaaggaggagcgcatgagcaacggacaacagaggttaacctatgaggagaagatg
gctcgcaggctgctgggggcagacaatgcagccacagtactaaacacacagcagcaggat
gaggagccagttacacaggattccagttcatctgacatagaatctgtccctcaaaaggag
tacaaggtgtccagcttcgagcagcgcctgatcagtgagatcgagttccgtctggagcgc
tctccagtggaggagtctgacgacgatgtgcagcatgacgagaatgccaccggcaccggg
gtggtgcccttcttcgacagcaagctcaaacactacaaggtgttcgagggcatgcccgtc
accttctcctgcaaggtcattggagaccccaagcccaagatctactggtttaaggatggg
aagcagatctctaagaggagtgaacactacaggatcagccgcgacgctgacgggacctgc
aacctccacaccgccgccgcctcattggacgatgacggcaactacaccattatggctggt
aaccctgaggggagggtgagctgtactggaaggatgatggtccaggcagtgaaccagagg
gggaggagccagcgctctgcacctggacacatccgcagacctaggtctcggtccagagac
agtggtgatgagaacgagaacatccaggagcgtcacttccgcccccacttcctgcaggcg
cctggtgacctcatcgtccaggagggtaggctctgccggatggactgcaaggtgagtggc
ttgcccacaccagacctgatctggcagctgaatggtcagaccattcgtcctgactccgcc
cacaagatgctggtgagggagaatggcgtccactcgctggtcatcgagcccgtgtccagc
cgtgatgcaggcatctacacctgtattgccagcaaccgcgctggacagaactccttcaac
ctggaactcattgtagcagccaaagagatgcacaaggccccttcgttcatcgagaagctg
cagaacactggtgttgccgagggttacccggtgcgtctggagtgccgtgtgtcggctgtt
ccctacccacagatcttttggaagaaagagaatgaatctttcacgcacaacacagacagg
ataagcatgcaccaggacaactgtggctatctgtgtatgatcatccaaccagccatgaag
gaggatgctggctggtacaccgtgtctgccaagaacgaggctggcattgtgtccagcact
gcacgactcgacgtccacactcagtggcagcagcccaacactcccaagcctaagaaggtg
cgtccgtcgacgagtcgctatgcagcgctgacagagagaggactggacgtgaaggcagcc
ttcttccccgactccagccccctgcagccgggaggcctggtggagagtgatgacctgtag
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integrated database retrieval system