Oncorhynchus kisutch (coho salmon): 109902787
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Entry
109902787 CDS
T09179
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109902787
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109902787
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109902787
NCBI-ProteinID:
XP_020355018
Ensembl:
ENSOKIG00005029205
UniProt:
A0A8C7MP47
LinkDB
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Position
LG13:18610217..18618952
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AA seq
468 aa
AA seq
DB search
MNPDSDYGMSTVSCGNGKLRSWLIEQVDTGKYAGLVWENDDKSIFRIPWKHAGKQDYNRD
EDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVEKSQLDISDPYKVY
RIIPEGAKRHFLLSGSKQEDGGSPQTPPSYPMHPSYPALQTQMSGYMSSAERGWMRDYLP
EQTSLPELPYAQCSYPSRSLPWAQGPSMDNGYQITGSFYTYPTDGQPSSFTLDTSMRSAE
ALSDMRLHVSVFYRDSLWREVTTSSPEGCRITPCSPDDKLYSPTGGPDLVPLPLDSLPAL
GRGEECPPSPPGGTLERGVLLWMAPDGLYARRLCQERVFWEGGLSPYGDKPNKLEREHTC
KLLHTQDYFAELQGYALHGRPPPRLQVLLSFGDECLDPQRQRRTLTVQVEPMFARQLLYY
TQHQQTSGHYYRSYDLSLPGVTEHSMTPALTEDYQRVITHHHSNTLQD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggattcggactacggcatgtctacagtgagctgtggaaacgggaagctccgc
tcgtggctgatcgagcaggttgacaccgggaagtacgcaggcctcgtgtgggagaacgac
gacaagagcatctttaggataccgtggaagcacgcaggcaagcaggactacaaccgagac
gaggatgccgctctcttcaaggcttgggcgctgtttaagggcaagtttcgcgagggcatc
gacaaacctgacccgcctacgtggaagacgcgcctgcggtgcgcactcaacaaaagtaac
gatttcgaagagctcgtggaaaagagtcaactggacatctcagacccctacaaagtctac
cggatcatacccgagggcgccaagagacatttcttgctatcaggatccaaacaggaggat
ggtggcagcccgcagactcccccgagctatcccatgcacccctcctaccccgccctacag
actcagatgtctgggtacatgtccagtgcagagcgaggctggatgagggactatcttcca
gagcagacctcgctccctgagctgccctatgcccagtgttcctacccctcacgcagccta
ccctgggcccagggccccagcatggacaacgggtaccagatcacagggtccttctacacc
taccctactgatggccagccctcctccttcacactggacaccagcatgagatcagccgag
gcactctcagatatgcggttacatgtgtcggtgttctaccgggactcattgtggagggag
gtgaccacctctagtcctgaaggctgtcgcatcactccctgctccccagacgacaagctc
tattcccccactggaggtccagacctggtgcccctacccctggacagcctcccagccctg
gggaggggggaggagtgccctcccagcccacctggtggtaccctggagaggggcgtgctg
ctatggatggccccagatggcctctacgctcgtcggctgtgccaggagagagtgttctgg
gagggagggttatcgccctacggagataaacccaacaagctggagagagaacacacctgt
aaactactgcatacacaggactactttgcagagctgcagggctatgccctccacggccgg
ccccctccacgtctccaggtgctgctgagttttggagacgagtgtctggacccacagaga
cagaggaggaccctcactgtacaggtggagcccatgtttgccaggcaactcctatactac
acccagcaccagcagaccagcggacactactaccgcagctacgacctctccctcccaggg
gtcacggaacacagcatgacacctgctttaaccgaggactaccagagggtcatcacgcat
caccatagcaacaccctgcaggactga
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