Oncorhynchus kisutch (coho salmon): 109902871
Help
Entry
109902871 CDS
T09179
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109902871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109902871
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109902871
Complex C
U4/U6.U5 tri-SnRNP related factors
109902871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Wap1
Motif
Other DBs
NCBI-GeneID:
109902871
NCBI-ProteinID:
XP_020355142
Ensembl:
ENSOKIG00005044396
UniProt:
A0A8C7N4S1
LinkDB
All DBs
Position
LG13:complement(12367651..12372532)
Genome browser
AA seq
309 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKPERIQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSHSKSPERSSKKS
HKKSRRGNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggactgttaaagatgcaaacagtatacatggaacaaatccacaatacttg
gtagagaaaattattcgtactcgaatttatgaatcaaaatattggaaagaagaatgcttt
ggactgactgccgaacttgtcgttgacaaagccatggcattgaagtttgtcggaggagtc
tatggaggaaatatcaaacctacaccgttcctgtgtctcactctgaagatgctacagatt
caaccagaaaaagacatcattgtagaatttatcaagaacgaggatttcaagtatgtccgc
ttgctaggggcaatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaacgactaccgaaaaatcaagagtcagaaccgaaatggagagtttgag
ctgcaacatgtagatgagttcattgatgaactgctacactctgagagaatgtgtgacatc
atccttcccaggcttcagaaaaggcaggtccttgaggaggcggagttattagacacacgc
atcagcgccctagaagaggacctggatgaagtggagaccagtgacgaggaagacgaggaa
gaggaaaagccagagagaattcagaccccagagccccacagacggagttaccgggacaac
gaccgccctcgccgttcgccctctccacgctacagacgcagccgttcacccagacggagg
agcagatcacccaagagacgaagcccatcccccaggcgagagcgccaccgcagcaaaagt
ccccgtcgccaccgcagccgctcccgagagagacgtcaccgctcaaagtccccaggccat
cacagaagccacaggcatcgcagtcactccaaatctccagagaggagttcaaaaaagagc
cacaagaagagtcgaagagggaacgagtga
DBGET
integrated database retrieval system
