KEGG T09179: 109902891

Oncorhynchus kisutch (coho salmon): 109902891

Entry

109902891         CDS       T09179

Symbol

ncbp2

Name

(RefSeq) nuclear cap-binding protein subunit 2

K12883

nuclear cap-binding protein subunit 2

Organism

oki Oncorhynchus kisutch (coho salmon)

Pathway

oki03013

Nucleocytoplasmic transport

oki03015

mRNA surveillance pathway

oki03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:oki00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109902891 (ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    109902891 (ncbp2)
   03015 mRNA surveillance pathway
    109902891 (ncbp2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109902891 (ncbp2)
   03041 Spliceosome [BR:oki03041]
    109902891 (ncbp2)
Messenger RNA biogenesis [BR:oki03019]
Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     109902891 (ncbp2)
Spliceosome [BR:oki03041]
Common components
  Common spliceosomal components
   Cap binding complex
    109902891 (ncbp2)

SSDB

Motif

Pfam:

RRM_1 RRM_5

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

LG13:complement(7969869..7971953)

AA seq 155 aa
MSIKLNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFS
KSGDVKRIIIGLDKVKKTACGFCFVEYYTRTDAENAMRFVNGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKVVSRP

NT seq 468 nt +upstreamnt +downstreamnt
atgtctattaaattgaatgcgctattcagcgactcctacgttgatgtaagccaatacaga
gaccaacattttaagggaaatcgatatgagcaagagaaactgctgaagcaggctaacaca
ctctacgtgggtaacctgtccttttacaccacagaggaacaagtgtacgagctcttctcc
aagagcggggacgtgaagagaataatcatcggcctggataaggtgaagaagacagcgtgc
ggcttctgcttcgtcgaatactacacgcgtacagatgctgaaaatgctatgaggtttgtc
aacgggacacgtctggatgaccgcatcatcagaactgactgggacgctggttttaaagaa
ggcaggcagtacggtcgtggcaagtccggtggtcaggtcagagacgaatacagacaagat
tatgacccagcccgggggggctatgggaaagttgtctcacggccataa

DBGET integrated database retrieval system