Oncorhynchus kisutch (coho salmon): 109902945
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Entry
109902945 CDS
T09179
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109902945 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
109902945 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
NACHT
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
DUF4062
NBCH_WD40
AAA_16
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
NPHP3_N
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
AAA_22
NPHP3
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_IFT140_1st
WD40_like
Nucleoporin_N
AAA
Beta-prop_IP5PC_F
AAA_25
ATPase_2
Beta-prop_SCAP
Viral_helicase1
AAA_18
Beta-prop_WDR19_2nd
RuvB_N
AAA_33
AAA_11
nSTAND3
NTPase_1
AAA_14
RNA_helicase
AAA_30
AAA_28
cobW
AAA_17
Motif
Other DBs
NCBI-GeneID:
109902945
NCBI-ProteinID:
XP_031642138
Ensembl:
ENSOKIG00005015132
UniProt:
A0A8C7FYE7
LinkDB
All DBs
Position
LG13:complement(42102500..42121889)
Genome browser
AA seq
1652 aa
AA seq
DB search
MASPRGALMEVLKGQATEGLKLRSNVVRVFVSSTFTDMSSERNALLDKTYPELQAFCQSL
GLVFEVVDMRWGLQDAIAVDHMTTELCLQEIEACRKVSVGPSFIALLGNRYGHRPIPRVL
PGKQFEVLLSKLPQDQVGLLHQWFRKDNNAVPPVYVLQPITTLLPHYNDLQPERRPLQDD
SVISWRYTEARLLQLLRTAAVQAEKDGDITVEQKHQFFKSVAEHEIEEGLRIPDGDESEP
SAILFVRELPHLRKKDGPKRLAQYMDVTADGLLDTEAQELLSGLKSRLFAASPGMLNLHS
VELCKGAIEPSCKEHAQYLESLCEQLVSQTKARIARRVGAGSSVEAGEVRTNGARGGDAS
QRKREEDSGWLLQELSHHMALSAGKCSGVFRGREGLLGKICLAMWEHTNTCHTPLVVHGP
PGVGKTTLLCKLAQEMRGLLDPRAVVVLRLLGTSAESSDLGRVLQSVCFQICSVFSLSPP
TPITAHTSEDLVRFFHGLLAEVSERGDTLLLILDSLDQLSSATQGQNLHWLPKDIPPNVH
LVVSTADTGSPVLANLRRTVEVPGNFFEVEPLSCDQGREIMNAYMREAQRSLTPEQCEVV
LCSFQLSGNPLHLKLLLDMARRWASYTPVTDLALSSSAQEVMSQLLQTLEERHGKQLVGA
ALGYIVSARGSLSEAELRDILSLDDNVLAEVYQYWLPPNHSLIRLPPLLWVRLRHDLGEL
LVEGQANGVTVLDFHHKLLTETVRERYQRSEQQADRHRVLAEYFLGSWSQGRFKAVLLPP
LTTTLDADRKVPPQPLWFAEGVANVKKLQELPYHLLHAGLWEELRQEVIGSSEWLYCKTL
TCGVASVIEDLTLCTKLMDCPETQLIRETFILLKPTLDFLDGQMDPPLFYTEVLARLHSF
AEMYPSLIGRLCCQCHDWLSCCPDPILVPKCTFLQPPGGALKTTLAGFQKGVTALDICPE
RGILLAGSEDGKVIAWDLNDLEVIQTLVGHTAKVLSVRVIDSGAHCLSLAADGSLRKWSL
LSGRQLYCTQEAVSINSLPSTTHIHVSEERALVFTHSGGQVKVWHLNTTELLFQVKDTGV
SIILGFLNGMVVSLSDGGLVTFSHPSAEDKTAQIHLEKSSHSLTLTATLTLQRNGRLLIA
SKEGFLYQVSSTVQGRQSQWTLRQTVTELPVCATFLSASDDERILLAGCERTLVLFHRES
DCVQSFLDLHHEDTVLCACVSGDSRVVVSGSEDQTIRVWSMTTGNLLDCFLGMDAPVTTL
ALYEGTVVSASSSAYYLKLWHLPSPNNPQQRPNCCIPAGCPQVALTKDGDTVYYVRNVGQ
KEVITWNCHTGSSADTMAVSAEVCCLELAQNKKLLFCGLTTGTVLIYPLAFPKETLCIPP
PETLPTVRCMAIGGQEKHMAVAYEDSVCLFEITARDSFPSVEGPSARFSLSLLHSPVSSM
ALLPDCRLLYGTACGEVTMYDFKSASTATLDGHRSRVNCVTTSNWGTHALVGSEDAVQRL
WGLTPLVLDHTMEYKGFLFEGVLCAAFSESDKHVFTGSQDRTIKVWDVASGSLLFVQYVY
APVTKMLTYRNGFVAISQLGYVIKEGFRCPDGVCPEYNPLRNVNAHYRVTSRQKSADSPH
SVITEIPEYNPAQFNFMALMLKSKPSHSCQLL
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccaagaggagcactcatggaggttctcaaaggccaggcaactgaaggactg
aagctcaggtccaacgtggtccgagtctttgtcagctccacatttacagatatgagcagt
gaaagaaatgccttattggacaaaacttatcctgaacttcaagctttttgtcagagtctg
ggcttagtgtttgaggttgtggatatgagatggggtctccaggatgcaattgctgtggac
cacatgaccacagaactgtgtcttcaggaaatcgaggcttgcaggaaagtatccgtagga
ccaagtttcattgctctgctggggaaccggtatggccaccgccctatcccccgtgtcctc
ccaggaaaacaatttgaggtgctgctgtccaagctaccacaggaccaggtggggcttctc
caccaatggttcaggaaagacaacaatgctgttccgcctgtctacgttcttcagccaatc
acaactctgttgccccactacaatgaccttcagcctgagagaaggccgctgcaggatgac
agtgtcatttcctggcgctacacagaggctcgattattgcagctcctacgcactgcggcc
gtgcaggctgaaaaagacggggatataacggttgaacaaaaacaccagttcttcaaatct
gtggcggagcatgagatagaggagggtctgcgaattccagatggggacgagagcgagccc
tccgccatcctcttcgtgcgggagctacctcacttgcgtaagaaggacggcccgaagcgg
ctggcccagtacatggatgtgacggctgatggcctgctggataccgaggctcaggaactc
ctctcgggcctcaagtcgcgtctcttcgctgcctcgccgggcatgctcaacctgcacagt
gtggagttgtgcaagggagccatcgagcccagctgcaaggagcatgcccagtacctggaa
agcctctgcgagcagctcgtgtcccagacgaaggcccgcattgccaggagggttggtgct
ggttcatcagtggaggctggtgaagtgaggacgaatggggcaagaggaggagatgcaagt
cagagaaagagggaagaggacagtggttggctgctccaggagcttagtcaccacatggct
ttgagtgccgggaagtgttcaggcgtatttcgcggcagggaggggctccttgggaagatc
tgcctggccatgtgggagcacaccaacacctgccacacgcccctggtggtgcatgggcca
ccaggtgtgggcaagacaacgctgctctgcaagctggcacaggagatgcgtggcctcctg
gaccccagggctgtggtggtgctcaggttgctggggacgtcggcagagagctccgacctg
ggccgtgtcctccagagtgtctgtttccagatctgctctgtgttcagtttgtcacctccc
accccaataacagcacacacgagtgaggacctggtgaggtttttccatggccttctagct
gaggtgtcggagcgaggagacacacttcttctgatactagactccttggaccaattgtcc
tccgccacccagggccagaacctccactggctacccaaagacatcccccccaatgtccat
ttggtggtgtccaccgcagatacgggctctccagttttggctaaccttcggagaacagtc
gaggtgccgggaaatttctttgaagtagaacccctatcatgtgaccagggtagagagatc
atgaatgcctacatgagggaagcgcaacgaagtctgactccagaacagtgtgaagtggta
ctgtgtagctttcagctgagtggaaatcctctgcatctgaagctactgctggacatggcc
aggcgatgggcgtcctatacacccgtgactgacctggccctgagcagtagtgcacaggaa
gtgatgtcacagctactccagacccttgaggagaggcatgggaagcaactggttggcgca
gctttgggatatattgtttctgctaggggtagtctatcagaggcagagctgcgtgatatc
ttgtcccttgatgacaatgtcctggctgaagtctaccagtactggcttccccccaaccac
tccctcatccgcctcccccctctactgtgggtgcgcctcaggcacgacttgggagaactc
ctcgtggagggacaggccaatggcgtcacggtgctcgacttccaccacaagctgttgact
gaaactgtgcgagagaggtaccagaggtcagagcagcaggctgacagacacagggtcctt
gctgagtacttcttgggtagctggagccaaggccgattcaaagctgtcctcctaccccca
ctgacgaccacattggacgctgaccgcaaggtgccccctcagcctctgtggttcgctgaa
ggagtggcaaatgtcaaaaagctgcaggagctgccctaccacctcctccacgcaggcctc
tgggaggagctgcgccaggaggtcataggcagtagtgagtggctgtactgtaagactctg
acctgtggcgtggccagtgtcattgaggacctgaccctctgcaccaagctcatggactgc
cctgagactcaactgatccgagaaactttcattctcctcaagcccaccctggactttcta
gatggacagatggacccccccctcttctacacagaggtcttggccaggctccactccttc
gctgagatgtacccttcactgataggacgactctgctgccagtgtcacgactggctctcg
tgctgtcccgaccccatccttgtccccaagtgcaccttcctccagcctccagggggagcg
ctaaagacgacgcttgctggtttccagaaaggggtcacagctctggatatttgcccagag
agagggatcctgctggcaggctcagaggacgggaaggtgattgcctgggacctcaatgat
ctagaggtcatccaaaccttagtgggacacacagctaaggtgctatcagtgagagtgatt
gacagcggcgctcactgtctctcattggctgctgacgggagtctgaggaagtggagcctg
ttgagtggcaggcagctgtactgtacccaggaggcggtgtccattaactccttaccttcc
accacacacatccatgtgtctgaggagagggcgcttgtcttcactcactctggaggccag
gtgaaagtatggcatcttaacacaacagaactactcttccaagtcaaagataccggtgtc
tccattattcttggatttttgaacggaatggtcgtctccctctcagacggaggacttgtc
acattttcccacccatccgccgaggacaagacagcgcagatacatttggaaaaatcttca
catagtttgaccctgacggcaacccttacactgcaaagaaatggcagactacttatagca
tccaaggagggcttcctctatcaggtttccagcacggtacagggcagacagtcacagtgg
actctgagacagacagtcacagagcttccagtctgtgcaaccttcctctccgcctcagat
gacgaaaggatacttttggcaggctgtgagaggacactggtccttttccatagagagtca
gactgtgtccagagcttcctggatctgcaccacgaggacacggtgttgtgtgcctgtgtg
tcgggcgacagcagagtggtcgtctcgggctctgaggaccagactatacgggtgtggtct
atgaccacgggaaacctccttgactgtttccttggcatggatgcccctgtcaccactctg
gctctgtatgagggcactgtcgtctccgcctcctcctcagcctactacctgaagctgtgg
catctgccctcacccaacaaccctcagcagagacccaattgctgcattccagccgggtgc
cctcaggttgccctcactaaagatggcgacacggtgtactatgttagaaacgtaggccag
aaagaagtgattacatggaattgtcacacaggctcttccgctgacaccatggccgtctct
gctgaggtgtgttgcctagagctggcccagaacaagaaacttctcttctgtggcctcacg
actggcacggtcctcatctatcccctagccttccccaaagagaccctgtgcatcccacct
cctgagaccctgccaacggtgcgctgcatggccattggcggccaggagaagcacatggcc
gtggcctacgaggactcagtgtgtctgttcgagatcacagccagggacagtttccccagc
gtggaggggccctccgcgaggttttccctctccctgctccactcgcccgtctcctccatg
gccctgctcccagactgtaggctgctgtacggaacggcctgcggggaggtcaccatgtac
gacttcaagtccgcctcaaccgccaccctggatggccaccgcagcagggtcaactgcgtg
acgaccagcaactgggggacgcacgccctggtgggctcagaggacgccgtgcagaggctg
tgggggctgacccccctggtgctggatcacaccatggagtacaaggggttcttgtttgaa
ggggttctctgtgcagcgttctctgagagtgacaagcacgtcttcactggctcacaggat
agaactattaaagtctgggatgttgctagtgggagtctgttattcgtccagtacgtctac
gctcctgtcaccaaaatgttgacctacaggaatggctttgtggcaatctctcagctgggc
tacgtcatcaaggaaggattccgctgtccggatggcgtctgtccggaatacaacccactc
cggaacgtcaacgcacactacagggtcacgtcccggcagaagagtgcagacagccctcac
agcgtcatcacagagatccctgagtacaatcctgctcagtttaacttcatggccctgatg
ctcaagagcaaaccctctcactcatgccaactgttgtaa
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