Oncorhynchus kisutch (coho salmon): 109902961
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Entry
109902961 CDS
T09179
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109902961
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
109902961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
I-set
TSP1_CFP_C
Ig_2
CarbopepD_reg_2
TSP1_spondin
TTR_TEN1-4
ig
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
109902961
NCBI-ProteinID:
XP_031642028
Ensembl:
ENSOKIG00005004138
LinkDB
All DBs
Position
LG13:complement(37402946..37430513)
Genome browser
AA seq
1253 aa
AA seq
DB search
MWDFTEMTLLLSFLVAVAVAQGPIWNSSLFKKWSQTERSRKLAYNTLTEPQQTTGVTEWT
SWFNIDHPGGNGDYERLEAIRFYYRERVCVRPVAMEARTTDWVAAAETGEVTHSSLEKGF
WCINKEQPYGRICSNYHVRFQCPPVQAYWTDWAAWGTCSATACNDVGIQVRKRKCMSIQP
LPLLLVPPCQGHHTERAECATPPCEAKWTPWSPWGACSATCGKGRRIRRRTCVRTSVTVQ
CVGRAAEIQKCGKNPCPPPNCNRECPKGRPSEDCSRCVCEGHVLQGEVLSMSGVPVAGAR
IALASQPKIIHARTDSKGLFRLPGVCSSSPTQLYIHKEKFAPVTTSTSSNSTGSSWVRVV
LKSAEKPYVVKHPEDKVRYEGQRVMLCCKATGSPMPDKYYWYHNGTLLDRNVFKYEEDLL
LRGLKPEQTGHYYCKASSQTGSSKSSQAFLTVIAKGTPACNPTPENHLIRLPMDCVQPGT
DSMLYNAGRCPHNKCAGSLDFDLRCRDGGGYCCGVQKMESRVIDCGSYSLPIKAVTECGC
QKCVVPKVLVRGRVVTADNDEPLRFGHMYIGKERVGTTGYKGGFTLNITPDTERLVVNFV
DPTQKFIDTPKVFIFDRRGGSVYHDVKVMRKQEPIDINAGETNTIDLGEIKGEDPIGQII
IPPNSFHRNNGEVYKGTVKASVTFIDPRNITTAAAAPGELNFVDDEGDMLPLRTYGMFSV
DFRDEANQEVLGAGAVQVLLDTQHVKMQAHIPKMKLWSLNPDTGIWEEESDFHYTQTTSG
GNGRSKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMNDKFLNTEQLEGVVISL
INLEPKPGFSSNPRAWGRFDSVITGPNGACLPAFCDAQVPDAYTAYVTGVMGGEELEAAP
STPKMNPNIIGVSQPYLDKIDYQRSDHDDPALKKTAFRINLAKPNPNNVEETNGPIYPYQ
SLIDCENAGVDANHFRFFRVEKDKYEYNVVPFQENDLTSWTGDYHSWWPNPQEFRACYIK
VKIQGQKEVMIRSQNHGGTHPETAGQLYGIRDIRSTRDMHVANTSAACLEFKCSGMLFDQ
AAVDRSLISVLPQGNCRRVGVNSLLKEYLTKHPPTSPNNESHAFNMLGPVDPLGHNYGIY
TVTDQNPRVAKEIAIGRCFDGTSDGFSREMKSDTGVALTFSCPERTVTRESLFQRLQTNP
SQTLSQMARDMREAQGLQVRGRSSRVVTYPSGSSSRRSSSTRRRSTMRAQDRQ
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgtgggactttacagagatgacactactcctgtctttcctggtggcagtggctgtggct
caaggacccatctggaacagctctctgtttaagaagtggagccagacagaaaggagcagg
aagctggcctacaacacactgactgagccacagcagaccacaggtgtgactgaatggacg
tcctggttcaacatcgaccatccaggggggaatggagactacgagcggttagaggccatc
cggttctactacagagagagggtgtgtgtccggcctgtggccatggaggcccgcaccacg
gactgggtagcagcagcagagactggggaggtgacccactccagcctagagaagggcttc
tggtgcatcaacaaggagcagccctacggacgcatctgttccaactaccacgtccgcttc
cagtgcccaccagttcaggcctactggacagactgggccgcctggggaacctgctctgct
acagcctgtaatgacgtgggcatccaggtgcgcaagaggaagtgtatgagcatccagccc
ctgcccctgctgctggtgcccccatgccagggccaccacacagagagggcggagtgtgcc
accccaccatgcgaagccaagtggactccttggagtccatggggagcatgctcggcgacc
tgtggcaagggtcgcaggatcaggaggaggacctgtgtgagaacctctgtgacagtgcag
tgtgtgggacgagcggcggaaatccagaaatgtgggaaaaatccatgccccccacccaat
tgtaatcgcgagtgtcccaaaggtcggcccagtgaggactgcagtcgctgtgtgtgtgag
gggcacgtgctccagggagaggtcctcagtatgtccggtgtccctgtagcgggggccagg
atagcgctggccagccagcccaagatcatccacgcccgcactgactccaagggcctcttc
agactcccaggggtctgctccagctcccccacccagctctacattcacaaggagaagttt
gcccccgttaccacctccacctccagcaacagcactgggtcatcctgggtacgggtggtc
ctaaagtctgcagagaagccatatgttgtaaagcacccggaggacaaagtacgctacgag
ggacagcgtgtgatgttgtgctgcaaggcaacagggtcgcccatgcctgacaaatactac
tggtaccacaatgggaccctactagataggaatgtgtttaaatacgaagaggatctgctg
ttgagaggcctgaagccagagcagactggacattactactgtaaagccagcagccaaaca
ggcagcagcaagtcttcacaggcattcctcactgttatcgctaaaggcacaccggcatgc
aaccccactcctgagaaccacctcatcagactgcccatggactgtgttcagcctgggacg
gactctatgttatacaacgccggccgctgcccccacaacaagtgtgcaggctccctggac
tttgacctgcgctgcagggatggaggtggctactgctgtggggtccagaagatggagagc
cgggtaatagactgtgggagctacagcctgcccatcaaagcggtaactgagtgtggctgc
cagaagtgtgtagtgcccaaggtgctggtacgtggcagggtggtcacagcagacaacgat
gaaccactgcgttttgggcacatgtacattggcaaggagagagtaggcaccacagggtac
aaaggaggcttcacactcaatataaccccagacacagagaggctagtagtcaactttgtg
gatcccacgcagaagttcattgacactcctaaggtgtttatcttcgacaggagagggggg
tctgtttaccatgacgtgaaggtgatgagaaagcaggaacctattgatatcaatgctgga
gaaacaaataccattgacttaggagaaattaaaggggaggaccctattggacagatcatc
atacctccaaattctttccacaggaataatggggaggtgtacaaaggtacagtgaaagcc
agtgtcaccttcattgaccccaggaacatcaccacagctgctgccgctcctggtgagctc
aactttgtggacgatgagggtgacatgcttccactgaggacatatgggatgttttctgtt
gacttcagagatgaggcgaaccaggaagtcctgggggctggagcagtccaagtactccta
gacacgcagcacgtcaaaatgcaagctcacattcccaaaatgaaactgtggtccctcaac
ccagacacaggtatctgggaggaggagagtgactttcactacactcagaccacatctggt
ggtaatgggaggagcaagcgagaggagcgcactttcctcataggtaacatggaaatcagg
gagcgtcgacttttcaacctggacgtgcctgagaaccgccgctgctacgtcaaagtgcgg
gcgtacatgaatgacaagttcctgaacactgagcagctggaaggtgtggtcatcagcctg
ataaacctggagcccaagcctggcttctcctctaaccccagagcatggggtcgctttgac
agtgtgataaccggacccaatggagcttgcctgccagccttctgtgatgcccaggtgcct
gatgcttacacagcttatgtcacaggagttatgggtggtgaagagctggaggcagctccc
tcaaccccaaagatgaacccaaacatcattggagtgtctcagccatacttagacaagata
gactaccagcgatcagaccacgatgatccagctctcaagaaaacagccttcagaatcaac
ttggcaaaacccaaccccaacaatgtggaagagaccaatggaccaatatacccctatcag
agtttaatagactgtgaaaatgctggagtcgatgccaaccacttccgattcttcagagtg
gaaaaggacaaatacgaatacaatgttgtgcccttccaagagaacgacttaacatcgtgg
acgggtgactaccactcctggtggcccaaccctcaggagttcagggcttgctacatcaag
gtcaagatccaggggcaaaaggaggtcatgataaggtcacagaaccatggaggcacccac
cctgagaccgcaggtcagctgtacggtataagagacatccgcagcacccgtgacatgcat
gtggccaacacctccgcagcttgcctcgagttcaagtgcagtggcatgctcttcgaccaa
gccgcagtcgacaggtccctcatatcagtcctcccacagggaaactgtcggagagtgggc
gtcaacagcctgctaaaggagtacctgaccaagcacccccctacctcaccgaacaacgag
tcccatgccttcaacatgctgggccctgtcgaccccttggggcacaactatggcatttac
acggtcacagaccagaaccctagggtggcaaaagagatcgccatcggacgctgctttgac
ggtacctctgacgggttctccagggagatgaagtcagacactggagttgctctgaccttc
agctgcccagaaaggactgtgaccagggagagtctcttccaacgcctccagacgaacccc
agccagactctttctcagatggcccgggacatgcgggaggcgcaggggctgcaggtccgg
ggaaggtcctcccgggtggtgacctacccctctggttccagcagccgcagatccagctct
accaggagaagatccacgatgcgtgcacaggacaggcagtag
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