Oncorhynchus kisutch (coho salmon): 109902983
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Entry
109902983 CDS
T09179
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109902983
04020 Calcium signaling pathway
109902983
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109902983
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109902983
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
109902983
NCBI-ProteinID:
XP_031641836
LinkDB
All DBs
Position
LG13:30288631..30394068
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AA seq
2239 aa
AA seq
DB search
MILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGIKVVALGFVFHKG
SYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKS
IMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHNTCLPMPNILENETVDKSESEFPCG
VRKCPDKYACSETWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGPTWNC
MYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWID
RAEEVMLAEENKNLGPSALDVLKRTTIKRRGVDAVHRGPEEEQYGDISSVGIPMTRASIR
SAKRGPTAYFKRKERLLRISIRRMVKTHTFYWTVLGLVALNTLCVAIVHHNQPHWLSVFL
YYAEFLFLGLFLTEMCLKMYSLGPRLYFHSAFNRFDCGVIVGSIFEVMWGFFRPDMSFGI
SVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQLFGGR
FIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLF
GNYTLLNVFLAIAVDNLANAQELTKDEEDEEAAFNQKHTLQKAKEVGAMSSLMSSHRRRR
PYLYRKRAIHRSRPAYSLEEAESLAEGPPCPPLNSSNSFMSRGERRRRMTMSVWEQRTSQ
LRRHRQMSSREILFSSPSEEQEAPPGCPHNLKATGTPTGSLKLADPTADPTASTAQPPKP
MDQTLEEPPLSMGVLEPPLSVPLAEPPIPIDSPLPDLPTSTVVSIPEPTESEPCPEGQLD
DTDHCHPGLNGRRSPRLNGERRQRAVRKFRPPAGDTLTPDMAGMRIRRPRGTGHHEAQVG
ARGLDSPQGEGSSRSVSKERKTPEERQDKERIACNTGETSQPSETREAEHRQGDPNQAGG
PELQNREEGPQSEPPPIQPFQAAVPELPEGQTRDSDTGNNATTLIQDKSPLSSSIYIEVT
NVQSSLELTPVTGNSKDMEASKPEKEEEQLTSPANIVTPDSMFIFKHGNPIRRACHYVVN
LRYFETCILLVIAASSIALAAEDPVSATSNWNKVLRYFDYVFTGVFTFEMIIKMIDQGLI
LHDGSYFRDLWNILDFIVVVGALVAFALTNVLGNNKGRDIKTIKSLRVLRVLRPLKTIKR
LPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSKDTEKDCQG
FYIDYEKDKKEVKRRDWRRHDFHYDNIVWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGP
SRGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAI
SAKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLK
HLNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQSIETFNMGF
LKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIRL
DEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQKCEPDPLALTSDHEERCG
TEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAA
CGRIHYTDMYEMLTLMSPPLGLGKKCPSKVAYKRLVLMNMPVDEEMSVHFTSTLMALIRT
ALEVKIARGGEDRGQMDSDLQKEISVIWSHLSQKTLDLLVPIHKASHMTIGKIYAAMMIM
DYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFLPHSPGSALTRGGFV
ALSPISPQEMFMQPMSQDLEDREEDYHNYHHHHLLHHQLHTLVPERKEFNRNLCPTNRQD
APLRVPGRAVSIRASSMPRLAVDTQVGTDSSKSMKRSFSTIGDQCVNGLWQEEYSLKRVS
PDRLNRPRQRSIRGIRCNLREPVDHERGRSKERRHLLSPDVSRCNSEERSQDPSQERKQS
RSPSEGRTHALHRQGNTSGSPDLSSTPRGRRQLPQTPLRPRPHISYSPLVCRAHLSPPAA
SEGRARTQEAPEETEDPSLREEGERLAPESGAGVGVVIGVGGPGLGVSHPHHSPHRYISE
PYLTLHEELHSPDSSGLDETLTFEAAIATSLGRANTISSAPQLRHNWQVPNGHFHKRLGQ
ASSVVACELLSDTDEDDRC
NT seq
6720 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagccaccatcatcgccaactgtatcgtactggctttggagcagcacctgcct
ggagaggacaagactcccatgtccaagagactggaaaagacagagccttacttcattggg
atgttctgctttgaagctgggattaaggttgtggcgttgggatttgtattccataaagga
tcctacttgaggaacggctggaacgtcatggacttcattgtggttctgagtgggattctg
gccacagcgggagctcacatgaacatcccagtggacctgcggaccctgcgggccgtacgc
gtgctcagacccctcaaactggtctctggaatccccagcctgcagatagtcctgaaatcc
atcatgaaagccatggtgccgctgctccagatcggcctgctgctcttctttgccattctc
atgtttgccatcatcggcctggagttctacagcggaaagctccacaacacctgtctgccc
atgccaaatatcctggagaatgagacggtggacaagtcggagtcagagttcccgtgtggg
gtgaggaagtgccctgacaagtatgcctgcagtgaaacctggatcggccccaacgatggc
atcacccagtttgacaacatcctgtttgctgtgctcaccgtcttccagtgcatcaccatg
gagggctggaccaccgtgctctacaataccaacgatgccttaggccccacgtggaactgc
atgtacttcatccctctgataatcatcggctccttcttcgtgctgaacctggttttggga
gttctctcaggggagtttgccaaggagagggagagggtggaaaaccgcagggctttcatg
aagctccggaggcaacagcaaattgagcgggaactcaatggctaccgagcctggatcgac
agagcagaagaggtgatgcttgcggaggagaataagaatttaggaccttctgctcttgat
gtgctgaagaggaccaccatcaagaggagaggggtggatgctgtccatcggggcccagag
gaggagcagtacggtgacatctcttctgtgggcatcccgatgaccagagccagcatcagg
agtgctaagagaggacccacggcttatttcaagcggaaggagcgtctgttgcgtatctct
atccgccgcatggtgaagacacacaccttctactggactgtactgggcctggtggccctc
aacacactctgtgtggccatcgtccatcacaaccagccccactggctgtctgtgttcctc
tactatgcagagtttctcttcctgggtctgtttctcactgagatgtgtttaaagatgtac
agcctgggacccagactctacttccactccgccttcaaccgcttcgactgcggcgtgata
gtgggcagcatctttgaggtgatgtgggggttcttcaggcctgacatgtccttcggcatc
agtgtgctgcgcgctctccgtctgctgaggatattcaagatcaccaagtactgggcgtcg
ctgaggaacctggtggtatccctgatgaattctatgaagtccatcatcagcctcatcttc
ctcctcttcctcttcatcctggtctttgctctgctgggcatgcagctattcggtggcagg
ttcatctttgaagactacactcctacaaactttgacacatttcctgctgccatcatgact
gtctttcagatcctgacaggagaagactggaatgaggtgatgtacaatgggatccgctcc
cagggaggagtgaagtcaggaatgtggtcctccatatacttcattgtgctcacactcttt
ggtaactacacactgctgaatgtcttcttggccattgctgtggacaatctggctaatgcc
caggaactaaccaaggacgaagaggacgaagaggctgctttcaatcagaaacatactctc
caaaaagccaaggaagttggggccatgtcttccctgatgtcatcacacaggaggaggaga
ccttacctgtacaggaaaagagcgatacacaggagccggcctgcctactctctggaggag
gctgagagcctcgccgaggggcccccctgcccgccattgaattcctctaactctttcatg
tccaggggagagaggagaagacggatgaccatgtctgtgtgggagcagagaaccagccaa
ctgcgcaggcaccggcagatgtccagccgagagatcctcttcagcagccccagtgaggag
caggaagcgccccctggatgcccccacaacctcaaagccacaggcacacccacaggcagc
ctgaagctggctgaccccacggctgatcctacggcctccacagctcagccccccaagccc
atggaccaaactctagaggagccacccctgtccatgggggtccttgagccccccttgtcc
gtccctttagcagagccacccatacccatcgacagtcccctgcctgacctccccacgtcc
acagttgtgtccattccggagcccactgaatctgagccatgcccagagggccagcttgat
gacaccgaccactgccacccaggtctcaatggccgcaggagccccaggttaaatggggag
agaaggcagagagcagtgcgtaagttccgccctcctgctggtgacaccctgacccctgac
atggcagggatgaggatcaggaggccaaggggcacagggcaccacgaagcccaggttggg
gctagaggcctggactcaccccagggggaggggagcagtcgctctgtcagcaaggagaga
aagaccccagaggaacgacaggacaaggagaggatagcctgtaacacaggagagaccagc
cagccttctgagaccagagaagctgaacacagacagggtgaccctaaccaggctgggggt
cctgagctgcagaacagggaggagggtccacagtcagaaccaccccccattcagccattt
caggctgcagtaccggagctcccagagggccagacaagagacagtgatactggtaacaac
gccaccactctgatccaggataagtcccctctgagctccagtatctacatagaggtgacc
aatgttcagtcttcactagagctcacccccgtcacaggtaacagtaaagacatggaggcg
tccaagcctgagaaagaggaggagcagttgaccagcccagccaatattgtcacgcctgac
agcatgttcatcttcaaacatggcaacccgatccgccgggcctgtcactatgtggtgaac
ctgcgttactttgaaacatgcatcctgctggtgatcgctgccagcagtatcgccctggct
gcagaggaccccgtgtcagccacctctaactggaacaaagttttgcgttactttgactac
gtgttcacaggtgtctttacatttgaaatgataataaagatgatagaccagggcttgatt
ctccatgacggctcctatttccgggacctgtggaacattctagactttatcgtggtggtc
ggagctctggtggccttcgccctcacgaatgtgttgggaaataataaaggacgggacatc
aaaaccatcaagtctcttcgggttctgcgtgtcctgaggcccctaaagaccatcaagaga
ctaccgaaacttaaggcagtgtttgactgtgtggtgacctctctgaagaacgtcttcaac
atcctcatcgtgtacaagctcttcatgttcatcttcgctgtcatcgctgtgcagctgttc
aaagggaagttcttctactgcacagatggatccaaagacacagagaaggactgccaaggc
ttctacattgactatgagaaggataaaaaggaagtgaagagaagggattggaggagacat
gacttccactatgacaacatagtctgggccctactcactctgtttactgtctccactggg
gagggctggccacaggtcctgcagcactctgtggacgtgacagaggaggacagaggtccc
agcaggggcaacaggatggagatgtccatattctatgtcatctactttgtggtcttcccc
ttcttcttcgtcaacatctttgtggctctcatcatcatcaccttccaggagcagggagac
aagatgatggaggaatgcagcttggagaagaacgagagggcttgcattgactttgccata
agtgccaaacccctgacccgctacatgcctcagaacaggcagacgttccagtaccgcctc
tggcactttgtggtctccccctccttcgaatacactgtgctggccatgattgcactcaac
accattgtcctgatgatgaagtattactctgccccaccagcatacgaggctgtgctgaaa
cacctgaacacagctttcactgtgctcttctctgtggagtgtgtcctcaagatcatggcc
tttggctttctgaactactttcgagacacttggaatatattcgacttcatcacagttttg
ggaagcatcacagaaatagtggtagacttgcagtcaattgagaccttcaacatgggtttc
ctgaagctgttccgtgcagccagactgatcaagctgttgaggcagggttacaccatccgc
atcctgctctggacctttgtccagtcctttaaggctctcccctacgtttgtctgctcatt
gccatgctctttttcatatatgcaatcatcggaatgcaggtttttggaaacatcagactg
gatgaggagactcacatcaaccaacacaacaacttcaagaccttttttggtgctctgatg
ttgttattcaggagtgccacgggggagtcgtggcaggagatcatgctgtcatgtttaggg
gggcagaagtgtgagccagaccccttagctctaacatcagaccacgaggagcgctgtgga
actgagtttgcctacttctactttgtctccttcatcttcttcagttcatttctgatgctg
aatctgtttgtggctgtaatcatggacaactttgagtacctcacccgggattcctcgata
ttggggcctcaccacctggatgaatttgttcgtatctggggtgaatatgaccgagctgct
tgcgggcgtattcattacactgacatgtatgaaatgctgaccctcatgtcgccacctcta
ggcctcggcaagaaatgtccatccaaagtggcttataagaggctggtgctaatgaacatg
cctgtggatgaagagatgtcagttcacttcacctccaccctcatggcgctgatccgaacc
gccctcgaggtgaagatagccagaggaggggaggaccgaggtcagatggattcagatcta
cagaaggagataagtgtcatttggtcacacctttcacagaagaccctggacctgctcgtc
cccatccacaaagccagtcatatgaccattgggaagatctatgcagccatgatgatcatg
gactactacaagcagagcaaagccaagaagctcaggcaacagctggaggagcagaaacac
gctcccatgttccagcgtatggacgcgtcctctctgcctcaagagatcctctgcagtgcc
aaagccctccctttcctgccccacagccctggatctgccctgaccagaggaggatttgtg
gccttgagtcccatatcccctcaggagatgttcatgcagcccatgtcccaggacctagag
gacagagaggaggactaccacaactatcaccaccaccacctgctccaccaccagctccac
acactggttccggagcgcaaagagtttaaccgcaacctttgccccactaacaggcaggat
gccccactcagggtgcccgggcgggcagtctctatccgagcctcctctatgcctcggctg
gctgtagacacacaggtggggacagacagcagcaaatcaatgaagcgctccttctccact
attggggatcaatgtgtgaatggcctgtggcaggaggagtactctctgaagagggtcagt
cctgaccgtctgaacagaccacgacagaggagcatcagaggaatcaggtgcaacctcaga
gaaccagtggatcatgagcgggggcgctccaaagagaggcgtcacctgctgtctcccgac
gtgtcccgctgcaactctgaggagcggagccaggacccgtcacaagaacgcaagcagtcc
cgttcccccagcgagggacgcacacatgccctccacagacagggcaacacttcaggcagc
ccagacctgtccagcacaccccgcggccggcgccaactcccccagacgcccttgcggcca
cgccctcacatctcctactcccccctggtgtgccgagcccacctctccccccctgctgcc
agtgagggcagagcccggacccaggaggcccccgaagagacggaggatccctcgttgcgg
gaggagggggagaggctagccccagagtcaggagccggggtgggggtggtaataggggtg
ggtggcccagggttaggggtcagtcacccgcaccactcacctcaccggtacatctcggag
ccgtacctgaccctgcacgaggagttacacagcccagactcctcaggcctggatgagact
ctgaccttcgaggcggccattgcaaccagtctgggccgggccaacaccatcagctctgcc
ccccagctcagacacaactggcaggtccccaacggacacttccataaacgcctgggtcag
gccagctctgtggttgcctgcgagctcttgagtgacacggacgaggatgaccgctgttag
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integrated database retrieval system
