Oncorhynchus kisutch (coho salmon): 109903222
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Entry
109903222 CDS
T09179
Name
(RefSeq) TATA box-binding protein-like protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109903222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109903222
03021 Transcription machinery [BR:
oki03021
]
109903222
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
109903222
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109903222
RNA polymerase III system
TFIIIB
109903222
RNA polymerase I system
SL1/TIF-1B
109903222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
109903222
NCBI-ProteinID:
XP_031643777
Ensembl:
ENSOKIG00005050320
LinkDB
All DBs
Position
LG14:16197406..16200279
Genome browser
AA seq
306 aa
AA seq
DB search
MDEDSALESYFDDPIGNVPDASGFLFEGDLGLQGAPQLQDPSFLSSLSQPEKDIGEDLDL
SFLPDDLPEDTCGNAATNANMTQDRVFDGYRPEESAETDPNQSAMTGGSTFCPMTPMTPM
TPVAESSGIIPMLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTAL
IFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEG
LVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERGEIYEAFENIYPIL
KGFRKQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagattcagcattggagagttattttgatgacccaattggaaatgtaccagat
gcctctggcttcctgtttgaaggggacctgggcttgcagggcgcccctcagctccaggac
ccatcctttctctcctcgttgagccaaccagagaaggacatcggggaggatctggatctc
agcttcctgcctgatgacctgccagaggacacctgtggaaatgctgctactaatgctaac
atgacacaagaccgcgtgttcgatggctacaggcctgaggagtctgctgagactgaccct
aaccagtcggccatgacgggaggttctaccttctgtcccatgacccctatgacccccatg
actccagtggctgagagttctggaataatccccatgttacagaatattgtatctacagtg
aatctggcttgcccactggacctgaaatccatcgctcttcaagccagaaacgctgagtac
aaccccaagcgttttgctgctgtcattatgagaatacgggaacctaggaccacagcactc
atcttcagctccggaaagatggtctgcacaggagccaagagcgaggagcagtctcgactg
gctgcccgcaagtatgctcgtgtggtgcagaaattgggctttcccgccaaattcctggac
ttcaagatccagaacatggtggggagttgtgatgtctgcttccccattcggctggagggt
ctggtgctgactcatcagcagttcagcagttatgagccagagctgtttcctggtttgatc
taccgtatggtgaaaccacgtattgtcttactgatctttgtgtctggaaaagtggttctg
acaggggctaaggaacgtggagagatctatgaagcctttgagaacatctaccccattctg
aaaggattcagaaagcaataa
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integrated database retrieval system
