Oncorhynchus kisutch (coho salmon): 109903291
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Entry
109903291 CDS
T09179
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04217
Necroptosis
oki04622
RIG-I-like receptor signaling pathway
oki04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109903291
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109903291
04625 C-type lectin receptor signaling pathway
109903291
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109903291
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109903291
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109903291
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C67
109903291
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109903291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
SH3_CYLD
UCH
Motif
Other DBs
NCBI-GeneID:
109903291
NCBI-ProteinID:
XP_031670431
Ensembl:
ENSOKIG00005027605
LinkDB
All DBs
Position
LG3:74024438..74085340
Genome browser
AA seq
980 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PSKGKRSLRVLDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVILVEEEMDFHPLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFTPRGSSSDKSSSGQSKPKCKGLGLQCGSRSKSELYYTLNGSSVD
HPVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNETTPPTRAPPSASLSIDNKFHSLPFSLS
RKTGPNGSLSHGPLSLSVQSVMGEQMQMPEPTSPSPPSPRPPSPPSSRGGGGVPGLEVGS
LVEVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFSCAPKKALFV
KLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGI
QGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYV
CATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYF
YQIFMDKKDKVGVPTSQQLIEWSFINSDLKFAEVSCLYVWLAVCQWLGCSEAPSCLIIQM
PRFGKDFKMFNKIFPSLELDITDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQF
CEKCNTQVHLHPRRKAHRHGKLSVPKELQEGVWRQGSFPRQRMELFAVLCIETSHYVAFV
KYGYQDSAWLFFDSMADRDGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQAR
RLLCDAYMCMYQSPTMSLYK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcctccccagaagaccttgaggatc
ccccggggcagcctgggacaggcctgccaggagaggaacagcctggggcgcacgctgccc
cccagcaaaggcaagaggagcctacgcgtcctggaccagaccaatgtggtgctgagcctg
gatgagcgggacgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagcccaggctggagcgggccagagac
atcgactgtggctccaaggtgcgcgtgcagctgcgttcgggtgatgaacctttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtctggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaagatgagtgcggggtgttcgtggccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcatcctggtggaa
gaggagatggatttccatccgctggagatcaactccagggtcctggtccagaccagagag
gggccggagaggggaaccatcatcttctgtgacctgctgcctgggaacgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgatggg
aagctgctgtgtaatttcgccagtctggaacacacccgtctagtccccatctgtgatgta
atgccagaatactccatgcaggaccagaggctgcagaagcacagttttacccccagaggc
agcagcagtgacaagtcctcctctggccaaagcaaaccaaagtgcaaaggcttaggtctt
cagtgtgggagtagaagcaagtcagaattgtattatactttaaatggcagctctgttgac
cacccagtccaggccaaatccaaaagcacatggtacattgatgaagtaggggaagaccct
gccaagtccctcacagacacgccccctgacttcaatgaaaccacacctcctaccagggcc
ccgccctctgcttccttgtccattgacaacaagttccactccctgcccttcagcctgagc
cgtaagactgggcccaatggcagcctgagccatggacccctctccctctccgtgcagtca
gtgatgggagagcagatgcagatgccagagcccacatcgcccagccctccctccccgagg
cccccctcaccccccagctctcgcgggggtgggggagtgcctggtctggaggtggggtcc
ctagtggaggtgaaggagaacccgcctctgtgtggggtcatccgctgggtggggctgccc
ccgggactaccagagccactggctggcctggagctggaggaagagtgtgttggctgtaca
gacggcacctttcaaggtacccgctacttcagctgcgcgcccaagaaggccctgtttgtg
aagctgaaatgctgcaggcctgactcccgtttcccctccctacaccactcctccaacccc
atagagagatgcaactctatcgctttcgggggttatctgagtgaggtggtgcatgagaac
actcctccacgcactgagaatgacggtctagacatcatggtgggcaagaagaaaggtatc
cagggacactacaactcttgctacctggactccacactcttctgcctgttttccttcagc
tcagtcctggacacagttctgctgaggccgaggtccaagactgacgtagagtattaccga
gagacacaggagctgctacgcacagagatagtcaaccccctgcgcatacatggctatgtg
tgtgccactaaagtgatgaagctcagaaggatactggagaaggtagaagctgcctcaggg
ttcacgtctgaagaaaaagatcctgaggagttcctcaatattctgttccatcacatattg
agggtggaccccttactcaagctgaggtcggcaggtcagaaggttcaggactgctacttc
taccagatcttcatggataagaaggacaaagtgggcgtgccaaccagccagcagctcata
gagtggtccttcatcaacagtgacctcaagtttgctgaggtgtcctgtctgtatgtctgg
ctggctgtctgtcagtggttgggttgctcagaggctccttcctgccttatcatccaaatg
cctcgctttgggaaggacttcaagatgttcaacaagatcttcccctcactagagttagac
atcacagacttacttgaagacactcccagggagtgtcgaatctgcgggggtctggctctg
tatgaatgcagggagtgctacgaggacggtgacatcactgccgggaagataaaacagttc
tgtgaaaagtgcaatacacaggttcacctccacccgaggaggaaggcccatcgccacggc
aagttgtccgtccccaaggaactgcaggagggtgtgtggcggcagggtagcttccctcgc
cagcggatggagctgttcgctgtgctctgcatcgagaccagtcactacgtggccttcgtc
aagtacggctaccaagactccgcatggctcttcttcgacagtatggccgaccgcgacgga
gggcagaatggcttcaacatcccccaggtgtctccatgtccggaggtgggggcctatctg
aagatgacccctgaggagctgcacgccctggaccccaaaagcatccagggccaggcccgc
cgtctgctgtgtgacgcctacatgtgcatgtaccagagccccaccatgagcctgtacaag
tag
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integrated database retrieval system
