Oncorhynchus kisutch (coho salmon): 109903369
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Entry
109903369 CDS
T09179
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109903369
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109903369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109903369
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109903369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
TackOD1
Motif
Other DBs
NCBI-GeneID:
109903369
NCBI-ProteinID:
XP_020355614
Ensembl:
ENSOKIG00005022003
LinkDB
All DBs
Position
LG14:73481096..73502461
Genome browser
AA seq
1450 aa
AA seq
DB search
MVNAMTGQLEQLSGAESIFNLAMAATGGGKIRSRRCHSASKPYAKSKQQQPGLISRVTDT
VKSIVPSWLQKYFRNGEAAEGGGAVVGAEQNSQAPPPNGSEEVAPRPDGRDTPEPGTSNT
EPSTSRASLNFQDVLSRPPLNRSHLHFPSLDTSLARRGPSSLFSQPSTSSAPFVGASPSF
SLVKEIKDNSSQHEDDNISTTSGFSSRASDKDVPNSKTASLPQLWSPEMDRTHSGPQQSQ
SSLKKPAFNLSVFGTSSTVSVSQSSQSSTSTMNSSVLNSSQLGDSPFYPGKTTYGGAAAV
RTARSRTAIPYQAPLRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPSTV
SSPLSTSLDGSTLHLSHFQAKKKLLDSPLPPVQKLVIPAAASVSGNRSMSFRPSLTPGGL
ARTPRDTPTRQSPLIPEAVAGPSQSTSSILPTYPLSSTPAFSSTGSGGGKMKRERTSTRP
SSKRPEDQIAELSDLPAISLPHSPSFSLPSFSFFQPPTATVTPTAALTTSPVLEEPIPNK
VPPTTAPSTPPSTPFTFSSPIVMATAASPPSFSPSSGFTFSAPVVKTGLSLSNGKMATPV
LAAVKHAASESMDEFEGPYKPAKVLKQGSVLDLLNGPGFAVPVTQTSPVPKAHQETPALS
TNTPSLGDLFKATTGSWDCDACVVQNKPTDTKCVTSVTPQLNSGSSLAKTDSIPLLSGLE
GSTTTTTPAATFGALFTKPAGSWDCDTCLVQNKPDAVKCVACETTKPGTGVKATLTMPAF
LEAKTLPAAAPLLGFGDKFKKPEGAWECGVCMVQNKAQDTKCVSCGIAKPGATAAPPSLT
PAPVSATPLLGFGAQFKKPEGAWECDVCCVENKGADKECVACQTPNPGAKVEPKAFGSSS
FGIQSSSDSGGFKFGMGASSDSGSGGFKFGGTLLDSSSSGGFKFGASASSDSTSTDTSSS
AGFKFGGSSEGCKFAASAASTPAVDEGKKAEAPSMGAGFKFSVGGGLSFGNTAAASTESE
PPYSGFSFHLVATSDSSSSTFSLPVSTENDSGASTETTTTTTAAAPMFGKLAEAKTTALT
TPLGGSIFRESLEKDKAPSFTFGKHEKEVASMGSGFLFSVPSKEGVASAPSTGFSFSKPD
PPKDQPNAPALAFEKPEDQSETPAAEAPKPSFSFGQSTTDAAAPKPAFGFMASTTTTSSS
SSSTPAPIPAPSTFLFGQSASTEATPAKSFLFGQSQDSLPAPAVSLNPGPAQPFLFGSGP
NAAAPSFTFGAVAPSTAAAPAPFVFSPASSTGFGSGQAPNFGQGTPHPSAPAFGSPAPSP
FSATASQPPAFGAKPNSVPVFGHQANSTPAFGSSAPTTPGGGFQFGGASVFGTSSNSTGV
FAFGGAPGGSPAPSATPSIAPQPSAPGSGFNFAAPPTFNIGSKSTTFTAAATGQHSIPGR
KIKTAVRRKK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgctatgacaggacagttggaacagctatccggtgccgagtcgatattcaat
ctagccatggcggccacgggtggagggaaaattagaagcagaagatgtcatagcgcttcg
aaaccttacgccaaaagcaaacagcagcagcctggcctgattagtcgagttacagacaca
gtcaagagcatcgttccttcttggctgcagaaatacttcaggaatggggaggctgcagag
gggggaggggccgtagtgggggcggagcagaacagccaggcccctcccccaaatggcagc
gaggaggtagcaccacgtcctgatggacgggacactccggagcccggtaccagcaataca
gaaccttcgacaagcagggcatccctgaacttccaggatgttctgtcgaggccccccctc
aaccgctctcacctccacttcccctccttggacacctccctggctcgcaggggtcccagc
tctctcttctcccagccctccacctcctctgcccccttcgttggggcctcgcccagcttc
tcccttgtcaaagagatcaaggacaacagctcacagcacgaggacgacaacatctctacc
accagcggcttctcttcacgtgcatcagacaaagatgtacctaattcgaagaccgcatcg
ctaccccagctctggtccccggagatggaccggacccactctgggcctcagcagtcccag
tccagtctcaagaagcctgcgttcaacctgtctgtctttgggacgtcctccactgtgagt
gtcagtcagtcaagtcagtcctccacttctacgatgaacagttcagtgctgaattccagt
cagttgggggattcccccttctacccagggaagactacctacgggggagcagctgctgtt
agaacagcccgttcacgcacagccataccttaccaggctccattgcggagacagatcaag
gccaagcctgctggggctcagccctgtggggtgaccagcgctaccgcccgacgcatccta
cagtccctggagcgcatgtccagccccctcgctgatgccaagagaatcccctctacagtt
tcctctcccttatcaacatcactggatggcagcactctacacctttcacattttcaggcc
aaaaagaaactgctggactctcccctccccccagtccagaagctggtgatcccggctgca
gcgtcagtgtcagggaaccgttccatgtccttcaggccctctctgacccctgggggcctg
gctcggacccctagagacacgcccacaagacaatcccctctgattcctgaagcagtggca
ggtccttctcaaagcacaagcagcattctacccacctaccctctgtccagcactcctgca
ttcagcagcacagggtcaggaggtgggaagatgaaaagggagaggaccagcacaagaccc
tcttccaaacgtcctgaagaccagatcgctgagctatcggacctgccagccatctcgctc
ccccacagcccgtccttcagtctgcccagcttcagcttcttccagcctcccaccgccaca
gtcacgcccactgccgctctcactacctcacctgtcctggaggagcccatccctaacaag
gtgccaccgactacagccccctctacccctccctccacacctttcaccttctcctccccc
atcgtcatggcaactgctgctagcccaccgtccttctccccgtcttctggatttaccttc
agtgcacctgtagtgaaaacgggtctgtcactatccaacgggaagatggccaccccagta
ttggcagcagtgaagcacgctgccagtgagagcatggatgagtttgaagggccatataaa
ccagccaaggtgttgaaacagggcagtgttctggacctcctgaatggacctggatttgcc
gttcctgttactcagacatcccctgtccccaaagcccaccaggagaccccagcactgtcc
accaacaccccctcccttggggacttgttcaaagcgacaaccggttcctgggattgtgac
gcctgtgtggtgcagaacaaacccactgacaccaagtgtgtgacctctgtgaccccacaa
ctaaactctggctcctctttagcaaaaaccgacagtatacccttgttgtccgggctggag
ggttccaccaccaccactactcccgctgcaacttttggggccctgttcacaaagcctgca
ggaagctgggactgtgacacttgtctggttcagaacaagcctgatgctgtcaaatgtgtg
gcctgtgagacaaccaagcctgggactggagttaaggccacactgactatgcctgccttc
ttggaggctaagactctgcccgctgctgccccactcctgggcttcggagacaagtttaag
aagccagagggagcatgggagtgtggcgtgtgcatggtgcagaacaaggcgcaggacacc
aagtgtgtttcctgtgggatcgctaagccaggagcaacggctgcgcctccatctctaact
cccgcccctgtcagcgccactcctctactaggctttggggcccagttcaagaagccagag
ggagcgtgggagtgtgacgtgtgctgtgttgagaacaagggagcagacaaggagtgtgtg
gcctgtcagacccccaatcctggagctaaagtagagcccaaagcatttggttcctcatcg
tttggtatccagtcctcttctgactctgggggattcaagtttggcatgggggcgtcatcg
gactctggttctgggggattcaaattcggcggcaccctcttggactcctcatcttcaggg
ggcttcaaatttggtgcatctgcctcatcggactctacctcgacagacaccagcagctct
gcaggcttcaaatttggaggctcctctgagggatgcaaatttgcagcttcagctgcttcc
acccctgcagtggacgaggggaagaaggctgaagcccccagtatgggtgccgggttcaaa
ttcagcgtcggcggtgggctctcgttcggcaatacagcagctgctagcacggagagcgaa
cccccttacagtgggttctcctttcatctggtggcaacctctgattcctcctcctctact
ttcagcctccctgtttctacagagaatgacagtggagcttctacagaaaccacgactacc
accacagcagcagcgcctatgtttgggaagctggctgaagccaagactactgcgctgacc
acaccactagggggcagcatattcagggaatcactagagaaagacaaggccccttctttc
acctttgggaagcatgagaaggaggttgcctctatgggttctgggttcctgttcagtgtt
cctagtaaagagggggtggcatcagctccatctacaggcttttccttcagtaagccagac
ccacctaaagaccagcccaatgcacctgccttggcctttgagaagccggaagaccagagt
gagaccccagcagcagaagcccctaagccctcattcagctttgggcaaagcacaacagat
gctgcagccccaaagccagcatttgggttcatggcaagcaccaccaccacctcttcttcc
agcagctctaccccagcccccatcccggcccccagtaccttcctgttcgggcagagtgcc
tctactgaggccaccccagccaagtccttcttgtttgggcagagccaggacagcctgcct
gcccctgcagtctctctgaaccctggcccggctcagcccttcctgtttgggtctggacct
aatgctgctgctccctccttcacttttggagcagtggcaccctccactgcagcagcccct
gctccgtttgtattcagccctgcctcctccactgggtttgggtcaggacaagctcctaac
tttggtcagggcaccccccatcccagtgccccagcgtttggttcccctgccccgtccccc
ttctctgccactgcctcccagccccctgccttcggagccaagcccaactctgtccccgtg
tttggccaccaagccaactccactcctgcttttggctcatccgcccccaccacaccaggt
ggaggtttccagttcggcggagccagtgtgttcggcacctccagtaacagcacgggggtg
tttgctttcggaggggcaccaggagggtcccccgccccttctgccacgccctccatcgca
ccccaacccagtgcacctggaagtggtttcaactttgcagcgccccctacctttaatatt
ggatcaaagagcaccaccttcactgcagctgccaccggacagcactcaatccccggtcgc
aagatcaaaacagccgtccgacgtaagaagtaa
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integrated database retrieval system
