Oncorhynchus kisutch (coho salmon): 109903386
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Entry
109903386 CDS
T09179
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109903386 (vps50)
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
EARP complex
109903386 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
109903386
NCBI-ProteinID:
XP_031644760
Ensembl:
ENSOKIG00005014144
LinkDB
All DBs
Position
LG14:72353780..72555829
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AA seq
975 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESIADLSPVEDFRIPSKEEMREMREQPIDPQAEQEIINSIQEV
YYSNDSFDMVQHELEKLPPELNLQELEEYRDQLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLSISKEDFTEASLGLLANQRRRHLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTRVQLAYTLLEKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITQDSYVPCLSDLCKALWEVMLSYHRTMQWHEEQDNEEPPPTTDE
AGAADTEEAVVDHSYVKKKLEHGLTRIWQEVQLKVKAYLLGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQSRSPSVSPSRQVLSSQDQVLSSKDQEVLSLFQHFSQEGNPFERHIDNKD
EETEDVLASNGYESDELEKCVYQDYDSDSDVPDELKQDYVDEQTGDVPLKSASRETLRSR
KKSDYSLNKGSNAPILTNTTLNVIRLVGKYIQMMNILKPIAFDVIHCVSQLFDYYLYAVY
TFFGRNDMYESSGPGLISSRLRTTLNRIQESLIQMDSLGEGSSIVHSGPGEDRKEKVPSP
HLSQLVVLTASETLYGLAQRVVATESLVFLAEQFEFLQSHLDTMMPAAKKPFLQQFYSQT
VSTASELRKPIYWVVAAKALDYEQMLLLMAGVKWDIREIMSQHNVYVDVLLKEFEEFNKR
LGDVSRHVRVPLPVSNVLWEHCIRLANRTLVEGYGNVKKCSNEGRALMQLDFQQFLMKLE
KLTDMRPIPDKDFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKAR
QKLLAAIDDIDRPKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagataaagtcacttatggcccggcagggcctgaaaagcccacaggagagcatt
gcagacctcagcccagtggaggacttcaggatcccaagcaaggaggagatgagggagatg
agggagcagcccatcgacccccaggcggagcaggagatcattaacagcatccaggaggtc
tactactccaacgactcctttgacatggtgcagcacgagctggagaaactcccacctgag
ctgaacttgcaggagctggaggagtacagagaccagctgaagagacaacaagcagcggtt
tccaaaaaagttgccgatcttatcctggaaaaacagccgtcctacgttaaggagttggag
agggtgacgtcattacaaaccaatctacagctggctgcagtgatttgcaccaatgctagg
aggcagctgagtatttcaaaggaggacttcaccgaggccagcctggggcttctagccaat
cagaggaggagacacctgctcacagggctgctgaagtcactgaggaccatcaagaccctg
caaaggactgatgttcgactcagtgagatgctggaggaggaggactatcctggtgccatc
cagttgtgtctggaatgtcagaaggctgccagcacattcaaacactacagctgcataagt
gagttgaattccaagctacaagacactctggagcaaatagaggagcagctggatgtggcc
ttgtctaaaacctgcaagcactttgatgtctcccactacacaagagttcagctggcgtac
acgctcctggaaaagacccagacggccatggaccagctccacatgcacttcacccaggcc
atccacaacactgtgttccaggtggttctgggatacgtggagctctgtgccggcaacgcc
gacaccaagtttcagaagatgcagtacaaggacctctgcacgcacatcactcaagacagc
tacgtcccctgcctgagcgacctgtgcaaggcattgtgggaggtgatgctcagctatcac
cggaccatgcagtggcatgaggagcaagacaatgaggagcccccacccaccacagatgaa
gcgggtgctgcagacaccgaggaggcggttgttgaccacagctatgtaaagaagaaactg
gagcatggactcactcgaatctggcaggaagtccagctaaaagtgaaagcctatctgctt
ggtacagacatgtctaacttcaaatatgacgacttcatcgtggtcttggatgttatcagc
aggctgatgcaagtgggggaggagttctgcggcagtaagtcagagttgctgcaggaatcc
atcaaacgtcagagcgtaaactacttcaagaactaccacaggacacgcctggaggagttg
cggatgtttctggaaaatgagacgtgggaactgtgtcctgtcaagtccaacttcaacatc
gctcagctccatgagtttaagttcatgggtcagagccggtccccttcagtgtctcccagt
agacaggtgttgtccagtcaggaccaggtgttgtccagcaaggaccaggaagtcctgtct
ctgtttcagcacttcagtcaggaggggaacccctttgagaggcacatcgacaacaaagat
gaggagactgaggacgtactggcctccaacgggtatgagtccgatgagctggagaagtgt
gtgtaccaggactatgacagcgacagtgacgtccctgatgaactcaagcaggactacgtg
gacgagcagaccggagacgtccctctcaagagtgcgtcaagagagactctgcgcagcagg
aagaagtccgactacagcctaaacaaaggctccaacgctcccatcctgaccaacacaacc
ctcaacgtgatccgactggtcgggaagtacatacagatgatgaacattctgaaaccaata
gcctttgacgtcatccactgtgtttcccagctgtttgattactacctgtatgctgtctac
accttcttcggccgcaatgatatgtatgaatcatcaggtccgggtctgatcagcagccga
ctgagaacaacactgaacagaatccaggagagcctcatccaaatggattctctgggggaa
ggcagctccatcgtgcacagtggtccgggggaggacagaaaggagaaggtgcccagcccc
cacctcagccagcttgtggtcctgacagccagcgagaccctctacggcctggcccagagg
gtggtcgccacagagtcactggtgtttctggccgagcagtttgagttccttcagtctcac
ctagacaccatgatgcctgcagccaagaagccgttcctccagcagttctactcacagact
gtctccacggccagtgagctacgtaaacccatatactgggtggtggcggccaaggcttta
gactacgaacagatgctgctgctgatggctggagttaagtgggacattagagagataatg
tcgcagcacaacgtgtacgttgacgtcctgttaaaggagtttgaagagtttaacaagagg
ctgggtgatgtgtccagacatgtccgcgtccctctgcctgtgtctaatgtcctgtgggaa
cactgcatccgtctggccaacaggacgctggtggaaggctatggtaacgtgaagaagtgc
agtaacgaagggcgggccctgatgcagctggacttccagcagttcctgatgaagcttgag
aagctgacggacatgaggcccatccctgacaaggactttgtggagacctacatcaaagcc
tactacctgactgagaatgacatggagcagttcatcaagaaccacagggagtactccatg
aagcagctggccaacctggtgaacgtgtgtctgggctctcacatcaacaagaaggcccgg
cagaaactcctggcggctatcgacgacatcgacagaccaaagagatag
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