Oncorhynchus kisutch (coho salmon): 109903391
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Entry
109903391 CDS
T09179
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109903391 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109903391 (pex1)
Membrane trafficking [BR:
oki04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
109903391 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
TIP49
RNA_helicase
NPHP3_N
AAA_5
AAA_28
AAA_33
ATP-synt_ab
AAA_18
ABC_tran
Sigma54_activ_2
RuvB_N
AAA_24
DUF815
NACHT
Bac_DnaA
IstB_IS21
APS_kinase
Parvo_NS1
AAA_29
cobW
Motif
Other DBs
NCBI-GeneID:
109903391
NCBI-ProteinID:
XP_020355649
Ensembl:
ENSOKIG00005013522
UniProt:
A0A8C7FSH9
LinkDB
All DBs
Position
LG14:complement(72132944..72160647)
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AA seq
1273 aa
AA seq
DB search
MLGNHGIQPVTLIFHNTKNCFLHLPPNLLKQLSLQDNQALELSWGHDARVFLSWTRSRSP
VNQEDHKVALSRQLGEKLGLRDGEQGFLRSCQQVLSVQQVFVEPLSSDDWEILELHSAEL
EQQLLDQIRVVFPDAVFPVWVDQRTVIYIRIASLTPTVPYGRLEQFTELHVSPKIRAGSE
DLSCAPSGSSLSNQNMPLHRQPNFDLSPSSRSSQEFSVQGTGLPVEQHPNAAALQSPRQW
GGIADVKSLVRYMLTGNCDPVRETPPIPTIPALLSDSVFRVCRAPPVSPGPLSATHGVAH
ILPWGQQMGGNINGGQPAVTYGLLSKVLSPKEVRERAKQAMEKKKSGRAGGAPQPGGAGG
VGDREEKEDATVVKVVCHLTEGLKGKQGSSREGELHSGRVWIPQSLETSLHINPHSSVRI
KPIKSTPKVATSIHLQPLQPLPAAESEVEIQTAFLGWLHTQSHEPLACLTGRSNTIFLPA
TEGKVEFALTVLKSEPEPESKEPDQLFLLAPCVIQKTDIQVVREPVTVPTMKAMGETPNQ
DLPSLSSLGGVEELIRTGFDFLSHSLMGRPLSWELVSTGRGLRGGALLITGAKGSGKTAL
SRALCRKTMEDLDAHVEVVDCKKLKGKRAETVRQILEEVFEQAVWRQPSVVLLDDLDHVT
GAPTSPEHEHGPEALLRLHIAQSLRDMVHDVVVRSSLVSLVVSSHSEHSLHPSLREVQGS
HFLQGFIHIQPPDQAQRGEILRCLILSKTAVSKETLHTLDLGIIAKETEGYLPRDLALLL
ERAIHANALHRARSTQGVCLLWRDFVQALKGFTPPTLWGAQLQSPSGAGLERVGGLHQVR
QLLMDTILLPAKYPVLFSSLPIRQRSGLLLYGAPGTGKTLLAGAVAKESGMNFISIKGPE
LLSKYIGASEQAIRDVFQRAQAAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLD
GVEGLQGVYVLAATSRPDLIDPALLRPGRLDKSLYCPPPDQEARVEILRALSHSVPLADD
VDLEQMAGATDTFTGADLKALLYNAQLEAIHSSLGPSLLHDLGSGSDSDISLSSMIFLNH
SSGSDDSTGEGERVCGLDHSMVLLDLSDVPPEDPRGNIWRLYFGSSFESELGNPSPSGLN
SQGVSGPNSNDLTGASVRDPGFSHPPAYMSSLQDGYEELSHEQLDRLRLEISNIKSNYRR
ATEDSVPVQGGPIRTGLLLCQAHLTSALNATRASLSKQDWRRYTDLYESFGASGEGKSQS
TVTFKPGQRVTLA
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcaatcatggcatccaaccggtcactctgattttccacaacacgaaaaactgt
tttcttcaccttcctccaaacttgttaaaacagctctctctccaagacaaccaggccctg
gagctgtcctggggtcatgatgcccgtgtgttcctcagctggaccagaagcagaagccct
gtcaaccaggaggaccacaaagtagcgctgagcaggcaactgggagagaagcttggactc
agagatggagagcagggcttcttgcggtcgtgccagcaggtcctgtctgtacagcaggtg
tttgtggagccactctcctctgacgactgggaaatcctggagctccacagtgcagagctg
gagcagcagctcctggatcagattagagtggtgtttcctgatgcagtgtttcctgtgtgg
gtggaccagagaacagtcatctacatcagaatcgcttcactcaccccaactgtgccgtac
ggtcgattagagcagttcacagagctacacgtctctcctaaaatccgtgctggaagtgag
gacctctcctgcgctccttctggatcatccttatccaatcagaacatgcccctccacagg
cagccgaactttgacctctcaccctcctccaggtcctctcaggagttcagcgttcagggg
actggactccctgtagaacaacatcctaacgctgctgccctccagagcccccggcagtgg
ggcgggatagcagacgtaaagagcctggtcaggtacatgctaacagggaactgtgaccct
gtgagagagactccacccatccccaccatccctgccctcctcagtgactcagtcttcaga
gtgtgcagagcaccgcccgtgtctcctggccctctgagtgccacccatggggttgcccac
atcctgccctggggccagcagatgggaggtaatatcaatggaggccagccagctgtgacc
tatggcctactgtcaaaggtgctctctcccaaggaggtgagagagagggctaagcaggcc
atggaaaagaagaagagtggcagggctggtggtgctccccagccaggtggtgctggtggg
gtaggagacagggaggaaaaagaggatgccactgtagtcaaggtggtgtgtcaccttaca
gaggggttgaaagggaagcagggatcatctagagagggagagctccacagtggaagggtc
tggatcccacaatccctggaaactagtcttcatatcaacccacactcatcagtgagaatc
aagccaatcaagtcaactcctaaagtagccaccagtatccacctgcagcctttacaacca
ctgcctgcagcagagagtgaggtggagattcagactgccttcctgggttggctgcacacc
cagagccacgaaccactagcctgtctgactggccgctccaacaccatcttcctacctgcc
actgaaggcaaggtggagtttgctctgactgtgttgaagtcagaacctgagccagagagt
aaagagcctgaccagttgtttctgttggctccatgtgtgatacagaaaacagacatacag
gttgtcagggaacctgtaactgtgcctacaatgaaagccatgggtgagacacctaatcaa
gatctaccctctctcagcagtcttggtggtgtggaggagctgatcaggacagggtttgac
ttcctctcccacagcctgatgggacggcctctctcctgggagctggtgtccaccggccgg
ggcctccggggcggagccctactcatcacaggggccaagggaagtgggaagacggcactc
tccagagctctgtgtaggaaaactatggaggacctggatgctcatgtggaggtggttgac
tgcaaaaagctgaaagggaagagagcagagaccgtgaggcagatattggaagaggtgttt
gaacaggcggtgtggagacagccctctgtggtcctgctggatgacctggatcatgtgacg
ggggcaccgacctcaccggaacatgaacacggaccagaggctctgctaaggctgcacatt
gcccagagtctaagggacatggtacatgacgtggtggtgcgctccagcctggtgtctctg
gtcgtcagtagtcacagtgaacattctctccacccgtcactcagggaggtgcagggctcc
cacttcctccagggcttcatacacatccagcctcctgatcaggcccagagaggagagatc
ctgcgctgtctgatcctcagtaagactgctgtatccaaggagaccctacacacgctcgac
ctggggattattgccaaggaaacagagggctacctgccccgtgacctggccctgctgcta
gagagggccatccatgccaacgccctacacagggcacgcagcacccagggagtgtgtctg
ttgtggagggattttgtgcaggctctgaagggcttcacccctcccactctgtggggggct
cagctgcagagccccagtggtgcaggccttgagagggtagggggactgcatcaagtacgc
cagttactcatggacaccatcctgctaccggccaagtatccggtgctcttctccagcctt
cccatccggcagcgctcaggacttctgctgtacggcgctccaggcactgggaaaaccctg
ctggctggtgccgtggccaaggagagtgggatgaacttcatcagtatcaagggtcccgaa
ctcctcagcaagtacattggagccagtgagcaggctatcagagacgtcttccagagagcc
caggctgctaagccctgcatcctgttctttgatgagtttgactccttggcacccaggagg
ggtcacgacaacactggggtcactgaccgggtggtcaaccagctactgacccagctggat
ggggtggagggactgcagggtgtgtatgtcctggctgccactagtcgtccagacttgata
gaccctgccctgctgaggcctggccgcttggacaagtctctctactgtccccctcctgac
caggaggcgcgtgtagagatcctgagggctctgagccactcggttcccctggctgacgat
gtggacctggagcagatggccggggccacagacacgttcactggcgctgacctgaaggcc
ctgctgtacaatgcccagctagaggccatccacagcagcctggggcccagcctgctgcac
gacctggggtcgggttcggacagcgacataagcctgtcctccatgatctttctgaaccac
agcagtgggtctgatgactcaactggggaaggggagagagtgtgcgggctggaccactcc
atggtgctgctggacctcagcgacgtcccccctgaggacccccgtggtaacatctggagg
ctgtacttcggcagctcctttgagtccgagctgggcaatccttccccctcaggactgaac
tcccagggtgtctcggggcccaactctaatgacctgaccggtgcgtcggtcagagaccct
ggcttctcccaccccccggcctatatgtcctctctacaggatggctacgaggagctcagc
catgagcagctagaccgcctccgtctggaaatcagcaacatcaagagcaactacagacga
gctactgaggacagtgtcccggtccagggtggccccatcaggacaggtctgctactgtgt
caggcccacctcacctcagccctgaatgccaccagagcctccctcagcaagcaggactgg
aggaggtacactgacctgtatgagtcctttggagcttcgggagaaggaaagtctcagagc
acagtgacgttcaaacccggccaaagagtaacgctcgcttaa
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