KEGG   Oncorhynchus kisutch (coho salmon): 109903476
Entry
109903476         CDS       T09179                                 
Name
(RefSeq) replication protein A 14 kDa subunit isoform X1
  KO
K10740  replication factor A3
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03030  DNA replication
oki03420  Nucleotide excision repair
oki03430  Mismatch repair
oki03440  Homologous recombination
oki03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109903476
   03420 Nucleotide excision repair
    109903476
   03430 Mismatch repair
    109903476
   03440 Homologous recombination
    109903476
   03460 Fanconi anemia pathway
    109903476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oki03032]
    109903476
   03400 DNA repair and recombination proteins [BR:oki03400]
    109903476
DNA replication proteins [BR:oki03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    109903476
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     109903476
   MMR (mismatch excision repair)
     109903476
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     109903476
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 109903476
NCBI-ProteinID: XP_020355812
Ensembl: ENSOKIG00005013079
LinkDB
Position
LG14:complement(65462568..65464179)
AA seq 118 aa
MAVFESQKARINSDMLSRYISRPICFVGRVEKVHPTGNSFSLSDGDGSAASVDLNEPSGV
VEVLGMVSNKGTIMASAYNILREDKGIPFAVHLELYNEVLKVIHDFPQHYPFGIATSG
NT seq 357 nt   +upstreamnt  +downstreamnt
atggcagttttcgagtcacaaaaagccaggattaactctgatatgctgtctcgatatatc
agcaggccgatttgcttcgttggacgcgttgagaaggtccacccaacaggaaactcattc
agtctttcggacggagacgggagtgctgcatcagtggacctcaacgagcccagcggggtg
gtggaggtgcttggtatggtgtccaacaaagggacaataatggcctctgcatacaacata
ctcagagaagacaaaggcattcctttcgctgtacacctggagctgtacaatgaagtcctg
aaagtcatccatgatttcccccagcactatccatttggaatagccaccagtggatga

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