Oncorhynchus kisutch (coho salmon): 109903488
Help
Entry
109903488 CDS
T09179
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109903488
04081 Hormone signaling
109903488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109903488
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109903488
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109903488
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
109903488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PAP_central
CpXC
Motif
Other DBs
NCBI-GeneID:
109903488
NCBI-ProteinID:
XP_020355825
Ensembl:
ENSOKIG00005004342
LinkDB
All DBs
Position
LG14:complement(64586274..64699786)
Genome browser
AA seq
416 aa
AA seq
DB search
MSEQGDKCTTPRWKHEAMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRT
IQKNLNPTYACKYEAKCIIDKVTRNQCQECRFKKCITVGMATDLVLDDSKRLAKRKLIEE
NRERRRKEELQKTVWDRPEPSQEEWDLIRMVTEAHMSTNAQGNHWKQKRKFLVEEAMLLN
EITCNLFYTSDQSAVGVKETKPEDIGQAPVINAPEGSKVDIEAFSQFTKIITPAITRVVD
FAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGG
LGVVSDAIFDLGLSLSSFHLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEH
YINYRKHKVAQFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaggagacaaatgcaccaccccccgctggaaacatgaggccatgcaaaat
gggtacatccctagttacctggacaaggacgagttatgtgtggtatgtggggacaaagct
acaggatatcactatcgctgtatcacctgtgaaggatgcaagggtttcttccggcggacg
atccagaagaacctgaacccaacatacgcgtgtaagtacgaggcaaagtgcatcatcgat
aaggtgaccaggaaccagtgccaggagtgtcgcttcaagaagtgcatcactgtcggcatg
gcaacagacttggtgctggacgacagcaagcggctcgccaagcggaagttgatcgaggag
aaccgtgagcggcggcggaaggaggagctccagaaaacggtgtgggaccggcctgagccg
tcccaggaggagtgggacctgatccgcatggtcaccgaggcccacatgtcaactaacgcc
cagggaaaccactggaaacagaaacgcaagttcttggtcgaggaagcaatgctacttaat
gaaataacatgtaatttattctatacttctgaccagagtgcagtgggggtgaaggaaacc
aagcccgaggacattggtcaagcgccggtcataaatgcacctgaagggagcaaagtggac
attgaagccttcagtcagtttacaaaaattatcacccccgccattacccgagtggtggac
tttgccaaaaagctgcctatgttctgtgagctgccttgtgaagaccagattatcctattg
aaaggctgctgcatggagatcatgtctttacgggcggccgttcgctacgaccccgagagt
gagacgctgacgcttaacggggagatggccgtgacccgcggccaactgaagaacggaggc
ctgggtgtggtgtcggacgctatctttgatttgggcttatcgctgtcttcgttccacctg
gacgactctgaggtcgctctgctacaggccgtcatcctcctgtcctccgaccgaccgggg
ctgaccagcgtggagcgtattgagcgctgtcaggaggagttccttctggcctttgaacat
tacatcaactaccgcaaacacaaggtggcgcaattctggcctaagctgctgatgaaggtg
acggacctgcggatgatcggggcatgccacgcctcccgcttcctgcatatgaaggtggag
tgccccaacgaacttttccccccactcttcctggaggtctttgaggactga
DBGET
integrated database retrieval system
