Oncorhynchus kisutch (coho salmon): 109903512
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Entry
109903512 CDS
T09179
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109903512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109903512
03021 Transcription machinery [BR:
oki03021
]
109903512
03036 Chromosome and associated proteins [BR:
oki03036
]
109903512
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
ARID
109903512
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109903512
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109903512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109903512
NCBI-ProteinID:
XP_020355866
Ensembl:
ENSOKIG00005031262
LinkDB
All DBs
Position
LG14:62900909..62969124
Genome browser
AA seq
2310 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPLEESVPGEKQHVNKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNGNSSRVNNNNNQNDTGGPEGNNHSGMGHHHQGSFPPPPYGYNQHY
SRGPFHQHGGQQSPGMAAAAGPAVQPGNMMDPYPPNSHEHGFPNHFNNYSPFPNRTSYQG
QGYAMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNIGNLQPTSTPTLNQLLTS
PSSTRTYQNYPQGDYSNQEGASKGAADMASSQYGGGHPGWQQRTHHPPPMSPGNTGPGNT
GPLNRNQPPSPMDQAGKMRGQGYGGVNPYSQQQGQGQGPPPPGAQQGASYPGQGYGPPGS
QRYPMGMQGRTPGGMGGMQYGQQMAGYGQQGPGGYGQQSQGYYGQHGPPPHAGQQQSPYP
QQVHTSQGQPSAQHSQPGAPGPYPQGQGPPQVGPPQIQPPYNQGPQGQAVPQGQGPQPSY
PQQQGPQGQGQQPPQQQLPSQQQGPPQQQERVAPPQAQPPPGHQQPPGHQPSPGHQPPPS
HGGQQPPTGHQPSPGPQGHHPSPGHGGPPQQQGQSQQGQPSPYSQTPPLQQSPFQRFPPP
PQELSQDSFSSQSSAPPSNQPMTSTKSGAEDSMQGRPSSLPDLSGSIDDLPTGTEGALSP
GVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRSGPLSPAAV
PGNQMPARPPSAHSDSIHSSMNQSAMGQDRVYMRNPQMPPYGSPQQPGSALSPRQSSGGQ
MHPGMGPYPQNNSMGNYGPQGGQYGPQGYPRQPGYSGMPNANYPGGPGGMNPMPGQAGGA
PYAGMPPGRMGPGQMGARPYGPGMGPNMGPGMPPQVTSGMCPPPGMNRKVPGGPPDAASA
MHHGGPGANSIHNRPPGYPPNMPQGMMGAGSPYGSGPGAINSMQGMLNQGGPYGGGPMGG
NMANNTPGIVPSPEFGIDVKLNPAQKMNNKVDGTPKPETKKVKKKSNSSTTTNEKITRLY
ELGPEPERRTWVDRYLAFTEEKATGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKK
WRELSTNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDLFIDAKKTTQPKIQPP
SPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPMPGVRLQDPFADGGDPAF
ARRNSMTPNSYQPGMGGPEMMGRMGPYEPNKDPFGGMRKAGEQFMTPALGPNSGVEGQFN
RGPPGPMVPNMQMGQRQQYPYVPGYDRRQEPGMGPDGSMGPGAPQPNLMPSGADSGMYSP
SRPPPVQRHDSYGNQYPGQGAPPGGPYPNQQPGMFPQQQPNYKRSPGDGAYGPPAKRHEG
DGMYNVPFSGQQQPGPQPPGAPQGQQDMYNQYNTGYPGSDRRPPGPQGQFPFPFGRDRGP
SSANSQSPMPPQMMGSPMQAAPDGPQCPMWQGRNEMGYPNYPNRQGPPGPGQGPPQGYHG
MNRSEEMMPGADQRINHEGQWPGHPNQRQPPYGPGGSGPPMSRPLQSNYQSSQNHISQVS
SPAPMPRPMESRTSPSKSPYMHSGIKMQKAGPPVPASHIGQAPVQPPLIRRDISFPPGSV
EASQPILKHRGRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNL
CQLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRMLIDPHTADEDCSDEELLEQEDME
EDEEEEEDDEEEEERKSNTDTTTSSQQVQVKQEGVGKEEKSPTEKLTAEEEREGGESSSS
SPAPQDSSLSQEKPKQASKFDKLPIKMVRKKDPFPGCRSSKLGRRQSFDSGLIHWSIGGG
DTTEHIQTHFESRSDLLKQRKRVPPSVTESRKKVAVTVSEHPEKTKPGKEQTTSPAEKIT
KTSAPTTPAPVTATIDDVLSARPGSVTEEAVRGAAKEQKESGGQFLFSIRQAQQSRRNIT
ILEDEPHSKDETPLSTLSDWQDALARRCICVSNIVRSLSFIPGNDLEMSKHPGLLLLLGR
LVLLHHRHPERKQAPVTYEKEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSI
YPESICLPLLDGLLHWAVCPSAEALDPFPMLGPHGALSPQRLVLETLSKLSIQDNNVDLI
LATPPFSRLEKLYGTLVRLVGERKVAVCREMSVVLLANLAQGDSMAARAIAVQKASVGNL
LGFLEDSLAATQYQQSQSSLMHLQGAHFEPTSVDMMRRAARALHAMAKVEENHSEFTLYE
SRLLDISVSPLMNSLVSHVICDVLFLIGQS
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgctagcgtcgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgtaaataag
gaaccgggatctgacaatggatctcctggacagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaacgggaattcgtccagg
gtgaataataataacaaccagaatgatactgggggaccggaggggaataaccactccggg
atgggccatcaccaccagggctcattccctccacctccttacggttacaaccagcactac
agccggggcccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcg
gggccggcagtgcagccaggtaacatgatggacccatacccgcccaactcacacgagcac
ggcttccccaaccattttaacaactacagccccttcccgaaccggacttcttatcagggc
caaggatacgccatgaattccccgcgtaataaccagcccccggcggctggggggcagcca
ggcaagcaacagccagcaggcggaactacagctatggctgcctcgtacaataatcagagg
tataacataggaaacctacaacccacgtctaccccgactttaaatcagcttctaacgtct
cccagctcaacgaggacctaccagaattacccacaaggagactatagtaaccaggaaggg
gctagcaagggagcagcagatatggccagcagtcagtatggtgggggccatccgggttgg
caacaaaggacccaccacccgcctccaatgagcccagggaacacgggacctgggaacacg
ggacctctgaacagaaaccagccccccagccctatggaccaggcagggaagatgagaggc
caggggtatggtggagtcaacccctactctcagcagcaaggccaggggcagggccctcct
ccgccaggggctcaacagggtgcctcctacccaggccagggctacggacccccagggtct
cagagataccccatgggcatgcagggacgcacccccggcggcatgggtggcatgcaatac
ggacaacagatggccggctatgggcagcagggtccagggggctacggtcagcagagccag
ggctactacggccagcatggccccccaccacacgctggtcagcagcagtccccctacccc
cagcaggtccacacctcccagggtcagccctcagcccaacacagccagcctggggccccc
ggcccctatccccagggccaaggccctccgcaggtgggtccacctcagatccagccgccc
tacaaccagggaccgcagggccaggccgtgcctcagggtcagggcccccagcccagctac
cctcagcagcaaggaccccaagggcaagggcagcagcctccacagcagcagctcccctcg
cagcagcaaggacccccccagcagcaagaaagggtggcccctccacaggcccagccaccc
ccgggccatcaacaacccccaggccaccagccctctccaggccaccagccaccccctagc
catggtgggcagcagccacccacaggccatcagccctccccaggcccccagggccaccac
ccctctccaggtcacggtggacccccccagcagcagggtcagtctcagcagggccagccc
tcaccctactcccagaccccacccctgcagcagtcgcccttccagcggtttccacctcca
ccgcaggagctctcccaggactcgttcagctcccagtccagtgctcccccctccaaccag
cccatgacttccacaaagagtggagctgaggacagcatgcagggacggccttctagctta
ccggacctctctggttctatagatgacctgccgactggtacggagggggctctgagtccg
ggcgtcagcacgtcgggggtgtccagtagccagggggaacagagtaaccccgcccagtca
cccttctcacctcacacctcgccccacttgcctggcatccgcgggccctccccctccccc
gtgggctcccctgccagcgtcaccccctcccgctctggacccctctcgcctgctgccgtg
ccaggtaaccagatgcctgcccggccacccagcgcccattcagacagcatccactcatcc
atgaaccagtcagccatgggccaggacagggtgtacatgcgtaacccccagatgcctccg
tacgggtcgccgcagcaacctggctccgccttatccccccgccagtcgtcgggaggccag
atgcatcctgggatggggccctaccctcagaacaactccatggggaactacggccctcag
ggtggacagtacggaccacaaggctaccccagacagcctggctacagtggcatgcccaac
gccaactatcctggaggtccaggaggcatgaaccctatgccaggccaggctggtggggcg
ccgtacgcaggcatgccccccggcaggatgggtccaggtcagatgggtgctcgcccctac
ggccctgggatgggccccaatatgggccctggcatgcccccacaggtgacctctgggatg
tgtccccctccaggcatgaacaggaaggtccccgggggccctccggatgcagcctccgcc
atgcaccacggtggccccggagctaactctatacataacaggcctccaggctaccccccc
aacatgccccaggggatgatgggagcagggtctccgtacggctcggggccgggggccatc
aacagcatgcagggcatgttgaaccaaggaggaccctatggaggagggcccatgggaggg
aacatggccaacaacacacctggcattgttcctagccctgagtttggcatcgatgtcaaa
ctgaacccagcccagaagatgaacaacaaggtggacggcacgcccaaacctgaaaccaag
aaggtaaagaagaagtcaaactcttcgacgacgaccaatgagaagataactcgtctgtat
gagctgggtccggagccggagaggaggacgtgggtagaccggtacctggcgttcactgag
gagaaggccacgggcatgaccaaccttcccgccgtgggacgcaaacctctggacctcttc
agactttacgtctcggtcaaagagataggaggcctcacacaggtgaacaagaataagaag
tggagggagttgtccaccaacctgaacgtgggcacgtccagcagcgccgccagctctctg
aagaagcagtacatccagtgtctgtacgccttcgagtgcaagatcgaacgtggcgaggac
ccgcccccggatctcttcatcgacgccaaaaagaccacccagcccaagatccagcccccc
agcccagctgggtctggatctctgcagggcccccagaccccccagtccaccagtagttcc
atggcggaggggggggacctgaagccccccaccccagcctccacccctcacagccagata
ccccccatgccaggagtcaggctgcaggacccgtttgcagacgggggcgacccggcgttt
gccagacggaactctatgacccctaacagctaccagcctgggatgggtggtccggagatg
atggggcgcatggggccctatgaacccaacaaggacccctttggtggcatgaggaaagct
ggagagcaattcatgactccagcgttagggcctaacagtggtgtggaggggcagttcaac
agaggccccccagggcccatggtccccaacatgcagatgggtcagagacaacagtacccc
tatgtacctggatatgacaggagacaggaaccagggatgggtcctgacggcagtatgggt
cctggagccccccagcccaacctgatgccttcaggggccgattcggggatgtactccccc
agccgacccccaccggtgcaacggcatgattcctatggtaatcagtatcctggccaagga
gcgccacctggtggcccctaccccaatcagcagccaggaatgtttccacagcaacaaccg
aactataagcggtctccaggcgacggggcctacggtcccccagcgaagcgtcacgagggg
gatgggatgtacaatgtccccttcagcggtcagcagcagccagggccccagccccctggg
gccccccagggccaacaggacatgtacaatcagtacaacacaggttaccccggctccgac
cgccgaccacctggcccccagggccagttccccttccccttcgggcgagaccgggggccc
tctagcgcaaactcccagtcccccatgcctccccaaatgatgggcagcccaatgcaggcg
gcccctgacggccctcagtgccccatgtggcagggacgcaacgagatgggctaccccaac
taccccaaccgccaggggcctccgggacctggccaggggcccccccaggggtaccacggc
atgaaccggtctgaggagatgatgccaggggcagaccagcggattaaccacgagggccag
tggccgggacaccccaaccagagacaacccccctacggaccggggggctcgggtcccccc
atgtccagacctctgcagtccaactatcagagctcccagaaccacatatcccaggtgtcc
agtcctgcccccatgccccgccccatggagagccggacgtccccctccaagtcgccctac
atgcactccggcatcaagatgcagaaggcggggccccccgtgcctgcttcccacataggc
caggcccctgtgcagccccctctcatcaggcgggacatatctttccccccagggtcggtg
gaggcctcccaacccatcctcaaacacagaggaagactcaccatgaaagacatcggcacc
ccagaggcctggagagtgatgatgtcactgaagtcaggcttactagctgagagcacttgg
gccttggacaccattaatattctactgtatgatgacaacagcatttctactttcaacctc
tgccagctgcctgggttcctggagctggtagtggagtatttcagacgctgcctcatcgag
atctttggcatcctgaaggagtatgaggtgggagaccctggccagaggatgctcatcgac
ccgcatactgccgacgaagactgctctgatgaagagctacttgagcaggaggacatggag
gaggacgaggaagaagaagaggatgacgaagaggaggaggagaggaaaagcaacacagac
accaccacctcgtcgcagcaggtccaggtgaaacaggagggggtggggaaagaggagaaa
tccccaacggagaagttgacagcagaggaggaaagggaaggaggagagtcttcttcctcc
tccccagcccctcaggactctagcctctcccaggagaaacccaaacaggccagtaagttc
gacaagctgcccatcaagatggtgcgtaagaaagaccccttccccggttgccgttccagt
aaactaggccggcggcagagctttgacagcggactgatccactggagtatcggcgggggg
gacaccacggaacacatccagacccacttcgagagccggtccgacctcctcaagcagcgg
aaacgggtgccgccgtcagtcaccgagagcaggaagaaggttgccgtgactgtgtcggaa
caccctgagaagaccaagcctggcaaggagcagaccacctcccctgcagagaagatcacc
aagacctccgccccaaccacacctgccccggtcaccgccaccattgacgacgtgctgtcg
gcccggccgggctcggtgacggaggaggcggtgcgaggagcagccaaggagcagaaggag
agcgggggacagttcctgttctccatccgccaggcgcagcagagccgacgcaacatcacc
atcctggaggacgagcctcacagcaaggacgagaccccactgagcacgctgtcggactgg
caggatgccctggctcgccgctgcatctgcgtctccaacattgttcgatcgctctccttc
atccccggcaacgacctggagatgtccaaacacccagggctgctgctgctgctgggccgt
ctggtcctgctccaccaccgtcacccagagaggaaacaggcccccgtcacctacgagaag
gaggaggatgagggggtgagctgtgagagggacgaatggtggtgggactgtctggaggtc
ctcagggagaactgcctggtcactctggctaacatctccggccagctggacctgtccatc
tacccagagagcatctgtctgcccctgctggatggcctgctccactgggctgtttgtccc
tcagccgaggccttggaccccttccccatgctggggccccacggggccctatccccccag
agactggtgctggagaccctcagcaagctgagcatccaggacaacaacgtggaccttatc
ctggccacgcctccattcagccggctggagaagctgtacgggacgctggtgcgtctggtc
ggggagaggaaggtggctgtctgcagggagatgtctgtggtcttactggccaacctggcc
cagggagacagcatggcggccagggccatcgccgtgcagaaggccagcgttggtaacctc
ctgggcttcctggaggacagtctagcagccacgcagtaccagcagagccagagttccctg
atgcacctacagggggctcactttgagcccactagcgtagacatgatgcggcgagcggcc
cgcgcactgcacgccatggctaaggtggaggagaaccactcagagttcaccctgtacgag
tcccgcctactggacatctctgtctcaccactcatgaactctctggtgtcccatgtgatc
tgtgacgtactctttctgattggccagtcatga
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integrated database retrieval system
