Oncorhynchus kisutch (coho salmon): 109903547
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Entry
109903547 CDS
T09179
Name
(RefSeq) rho guanine nucleotide exchange factor 2 isoform X3
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109903547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109903547
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109903547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
Prok-RING_1
Pinin_SDK_N
PHDvar_NSD
PHD
Motif
Other DBs
NCBI-GeneID:
109903547
NCBI-ProteinID:
XP_020355911
Ensembl:
ENSOKIG00005026016
LinkDB
All DBs
Position
LG14:60399189..60462437
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AA seq
1184 aa
AA seq
DB search
MSIEEIRCNHPLIQMPTTPSSYAHPPACLPSSSSIPPTPPYFPYPSPPCSPGPGVKGFVR
AGGVTLRSPATRHLTHLDPWRRHSWEPGAIVTVQQKGMEPSDNRSVSLENLDPEEMEKVL
GVALDVRRGGRDPRRNPITQEGSLSSLTEEEAGSDVQHYSILEEQSNQLQGCSASAPTLS
VARHRNLQSTAPRPRSDCYETLPYRQLGGSTQSVDSDLGLLLWGREGSWTEVERDEAREE
RTGSPLERTFSFLRKMAGNRKNKEKERMREREKEARDREARYSNGHLFTSLTVSGTTLCS
ACNKSITAKEALSCPTCSVTIHNRCRDTLPNCAKMKQRQQKMALMRNNSALQNVTLRTKT
PMMRERPSSAIYHSDNLRQSLLGSRRGRSGLSLSKSVSTNNITGNLNDDSPLGLRRILSQ
STDSLNFRNRAMSMESLNDEGEEYYTSMLEEMEIEGRDFEADSWSMAVDSGYLQTHRKDI
IKRQDVIYELIQTELHHVRTLRIMERVFRQGMLEEVQLEPGVVHAIFPCLDRLTAIHARF
LAQLLTRRNHSLQPGSTYNFTIHQLGDVLLEQFSGQCADEMRKTYAEFCSRHLKAVKLYK
ELLARDKRFQYFIRRVCRGHLLRRHGVQECILLVTQRITKYPVLIQRILDNTKDNEEEAS
CLAQSLTRIRELLTSVDQQVMELERTQRLQEIRARLDPRAEAKVRDGGLFRGGELLRRRL
IHEGMLLWKTPGSRLKDVQVLLMTDILVFLQEKDQRFIFPCLDKSPVLSLQNLMIREIAN
QERGLFLISDSSPPEMYEVHAASKDDKNTWIRLIQHTVRSCPSREEFPLIETEDKALLRR
LKADIQQKDREVLELLQERVTLFSDLAEVTGGQEIMLPGGPNSRNLFRADMPQVPLGERL
LTDAIAEVDRLSELLLGSTFAVPLPCSFNGHPNHTGALVINGQEVVLNGMHGCPAAKDWN
GNQAGDRPSTEEVYQRLVNLSAHLHALQGTVIKQDSILELCLRSDGPPVDAPTTPTGRVW
RSLSRDAGMAEATTGAAIGELALLQRQHSLLQEELGRLRGADGRLRDSEKARAQLERQVR
DMKVHSTTVFDSVGPAGSEQAPPLRKASETNADTKLASQESIEHSEGHQEGSDVEVTSDE
EEEEEEEKEAKASPRSESPRDLQDIPEESEATAELPREPDVSHC
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgaagaaatccggtgcaaccatcccctcatccagatgccgaccaccccttcc
tcgtacgcccacccaccagcttgcctgccctcttcctcctccataccacccacccccccc
tatttcccgtacccctccccgccatgctccccaggccctggggtgaaggggtttgtcagg
gccgggggggttaccctgcgctctccggccacccgtcacctcacccacctggacccctgg
aggagacacagttgggagcccggagctatcgttacggtgcagcagaaggggatggaaccc
agcgacaaccgcagtgtgagtctggagaacctggaccccgaggagatggagaaggttctg
ggtgtggcgctggatgtccggcgaggggggagggatcctcggaggaaccccattacccag
gagggctccctgtcctccctcacagaggaagaggcagggtctgacgtgcagcactactcc
atattggaggagcagtcaaaccagctgcagggttgcagtgcatcggccccgaccctcagt
gtggcgcgtcacagaaaccttcaaagcacggccccccgaccacgctccgactgctacgag
actttaccctaccgtcaacttggaggatccacgcagagtgtggatagtgacctgggtctg
ctgctctgggggagagagggaagctggacagaggtagagagagacgaggcccgggaggag
aggacaggcagccctttagagcgcaccttcagtttcctacgcaagatggccggcaaccgc
aagaataaggagaaagagcgcatgagggagagggagaaagaggcacgggacagggaggcg
cgctacagcaatgggcacctcttcacctccctcaccgtgtcggggaccaccctctgttca
gcatgcaacaagagcatcactgccaaggaggccctcagctgccccacttgtagtgtcacc
atacacaaccgctgtcgagacacgttgcccaactgtgccaaaatgaaacagaggcaacag
aagatggctctcatgaggaacaactcagctctgcagaacgtgacccttcgtaccaaaacc
cccatgatgagggaacgccccagctcagccatctaccactctgacaacctccgccaatcc
ctgctgggctcgcgccgtggacgctccggtctttccctctccaagagcgtctccaccaat
aacattacagggaacctgaatgatgactctcccttggggctgcgcaggatcctgtcccag
tccacagactcgctcaacttcaggaacagagccatgtccatggagtcgctcaacgatgag
ggggaagagtactacacctccatgctggaggaaatggagattgaggggcgggattttgag
gcggactcatggagcatggcggtggactcgggctacctgcagacgcatcgcaaagacatc
atcaagcggcaggacgtcatctatgagttgatccagacagagctgcaccatgtgcggacg
ctgcgcatcatggagagggtgttccgccagggcatgctggaggaggtgcagcttgagccg
ggcgtggtgcacgccatcttcccctgcctcgaccgtctcaccgccatacatgcccgcttc
ctggcacagctgctcacccggcgcaaccacagcctacagcctggcagcacctacaacttc
actatccatcagctgggagatgtgctactggaacagttctcgggccagtgtgctgacgag
atgaggaagacctacgctgagttctgcagccgccacctgaaggctgtcaagctgtacaag
gagctgctggccagagacaagcggttccagtacttcatacggcgggtgtgtcggggtcac
ctgttgcgtcgccatggcgtccaggagtgcatcctgttggtcactcagcgtatcaccaag
taccccgtactcatccagcgtatccttgacaacaccaaggacaatgaagaggaggcctcc
tgtctggcccagtctctgactcggatcagggagctactcacctcagtggaccagcaggtg
atggagcttgagcggacccagaggctgcaggagatccgggccaggctggaccctcgcgcc
gaggccaaggtgagggatggtggcctgttcagaggaggagagttgctccgcaggagactc
atccatgagggaatgctgctctggaaaacccctgggtccaggctcaaagatgtgcaggtc
ctgctgatgacagacatcctagtgttcctacaggagaaagaccagaggttcatcttccct
tgtctagacaagtctccggtcctctccctgcagaacctcatgattagggagatagccaat
caggagcgagggctcttcctcatcagtgactcctctcctccggagatgtatgaggtccat
gctgcctcgaaagatgacaagaacacctggatacgcctcatacaacacactgtcaggagt
tgtccttccagggaagagttcccactcatagagactgaagacaaggcccttctgagacga
ctgaaagcggacatccagcagaaggaccgggaggtgctggagctgctccaggagcgagtc
accctgttctcggacctggccgaggtgacagggggccaggagatcatgctgccggggggc
cccaactcccggaacctgttccgggctgacatgccccaggtgccgctcggcgagagactg
ctcacggacgccatcgcagaggtggataggctgagtgagctactgctgggctccaccttt
gcagtgcctctgccctgcagtttcaacggtcacccgaaccacacgggagcactagtgatc
aatggccaggaggtggttctcaatggaatgcatgggtgcccagcagcaaaggactggaat
gggaatcaggctggagataggccctcaaccgaggaagtgtatcagaggctggtcaacctt
agtgcccaccttcatgccctccagggcactgtgatcaagcaggactccatcctggagctc
tgcctgcgctccgatggcccgccagttgatgccccgaccacgcccaccggacgggtgtgg
cgctccctgtcacgtgacgcaggcatggccgaggccaccacgggggcggccattggggag
ctggccctgctccagaggcagcacagcctcctgcaggaggagctgggtaggctgcggggg
gccgatggccgcctgagggatagcgaaaaagcccgagcccagctggagaggcaggtccgc
gacatgaaggtccacagtaccaccgtgtttgacagtgtgggacctgcaggctcagagcag
gctccaccccttcgtaaagcaagtgaaaccaacgcggacaccaaattggccagccaagag
tcaatcgagcattcggaggggcatcaggaaggcagtgatgtggaggtgacgtcagatgag
gaggaggaggaggaggaggagaaggaggccaaagcgtcaccgcgctcggagagtccccga
gatcttcaggacattccagaggagagcgaagccacagcagaactaccacgagagcctgac
gtgtcacattgctaa
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