Oncorhynchus kisutch (coho salmon): 109903590
Help
Entry
109903590 CDS
T09179
Name
(RefSeq) tenascin-X-like
KO
K06252
tenascin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109903590
04518 Integrin signaling
109903590
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109903590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109903590
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109903590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
Fibrinogen_C
EGF_Teneurin
fn3
EGF_2
EGF_Tenascin
hEGF
EGF
DUF7949
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
EGF_integrin
Ig_J
PRR11_2nd
Motif
Other DBs
NCBI-GeneID:
109903590
NCBI-ProteinID:
XP_020355974
LinkDB
All DBs
Position
LG14:56335020..56364041
Genome browser
AA seq
1173 aa
AA seq
DB search
MPLVPSFLILLLTCPALLTPSASQGLQPGGQRAPRDTKPEGGGQPIKVVISEACVQGDSS
QTQGKELDLEPGSALVLTHRIRLVPGSCAGGCEAEFAALRDRLERLEKEVSSLREKCGGP
EGGCCTSQQSKGAECSIKPEGDECPNECSDQGRCEDGKCVCFPGFSGPDCSLSDCPGNCN
DKGKCVNGQCVCDPGFTGPDCSSESCPGNCNNKGRCVNGQCVCDPGFTGPDCSSESCPGN
CNNKGRCVNGQCVCDSGFTGPDCSSESCPGNCNNKGRCVNGQCVCDSGFTGPDCSSESCP
GNCNNKGRCVNGQCVCDSGFTGPDCSSESCPGNCNNKGRCVNGQCVCDPGFTGPDCSTKA
CPGNCKNGGKCVNGKCVCDSSFTGPDCSTKSCPGNCSNRGKCVNGQCVCDSGFTGPDCSA
KACPNNCSNKGRCVNGKCVCEVGFSGQDCAAKGCPNNCSNKGRCVKGRCVCRRGFAPPDC
SQCEAGFTGADCGTAMSGVSQLNTKDITESSVTLYWTPPPVQYDTYHVTFASQKEGDQQI
TSQVGGKLTTYTQTGLAAGQEYTVTIKGEINRRMGTESTVEFTTLISGPTNLRVVKTTTT
SAVVQWEQSQGHVDRYRLTVAPNQTDGTAKGRQDLTLPPERDSAQIDGLDPGHLYDITLV
AEKGGIKSKPATVQVTPGPEPPSGLVFSEVTETSFSVSWTKPKGPVSGFKVTYTNTQEGE
PLSATVDSGDSTLALSKLSPGSSYEVSVISVLGLDESDAIKDLVMTLPDPPRDLRAINVT
DTKALLLWRPALATVDRYVIVYGSEKGSDDAKITVSGNAAEQQLKGLQGSTRYTVTVTSQ
LGNLDSSAAITVFTTTGGSRGDGEVPRDLKASQVTPRSALLTWKAPSAAVGSYKLTYQTE
GQEIKEVTIDSTVTEFKLTRLHPMSKYTVHLQGERGGSYTATISTEFTTGNLRYPFPSDC
SQELLNGIHESGEVEIFPRGRQGKPVLVYCDQVTDGGGWTVFQRRMDGKTDFFRGWKNYS
KGFGELSGEFWLGNENLHNLTSMAPMTLRVDLRAGDESVFAKYSAFTVDTVRRNYALKVS
GYSGTAGDSMSYHNARMFSTRDRDPTPFITRCAMSYRGGWWYKNCHEANLNGLYDTSVNH
QGVIWTAWKGKDLSIPFTEMKLRPTSFTPPTQG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgtcccatccttcctcatcctgctcctcacctgccctgccctcctgacccca
tcagcttcccagggcctgcagcctgggggtcaaagggcacccagggacacaaagccagaa
ggtggcgggcagccaatcaaagtagtgatctctgaggcgtgtgttcagggggactccagt
cagacccagggcaaggaactggaccttgagcctggttctgctctagtccttacccatcgg
atccgactggttccggggtcgtgcgcaggcgggtgcgaggccgagtttgctgccctgcga
gaccgtctggagaggctggagaaggaggtgtcatcattgagggagaagtgtggaggccca
gaggggggctgctgcacgtcccagcagagtaaaggtgcagagtgctccatcaagccggag
ggagacgagtgtcctaatgagtgcagtgaccagggacgctgtgaagacggcaagtgtgtc
tgcttcccagggttcagtgggcccgactgcagtttgtctgactgccccggcaactgcaat
gacaaggggaagtgtgtgaacgggcagtgtgtgtgtgacccaggtttcacggggccagac
tgctcttcagagtcctgtcctggaaactgtaacaacaaggggcgatgtgtgaacgggcag
tgtgtgtgcgacccaggtttcacagggccagactgctcttcagagtcctgtcctggaaac
tgtaacaacaaggggcgatgtgtgaacgggcagtgtgtgtgcgactcaggtttcacgggg
ccagactgctcttcagagtcctgtcctggaaactgtaacaacaaggggcgatgtgtgaac
gggcagtgtgtgtgcgactcaggtttcacggggccagactgctcttcagagtcctgtcct
ggaaactgtaacaacaaggggcgatgtgtgaacgggcagtgtgtgtgcgactcaggtttc
acggggccagactgctcttcagagtcctgtcctggaaactgtaacaacaaggggcgatgt
gtgaacgggcagtgtgtgtgcgacccaggtttcacagggccagactgctccaccaaggca
tgtcctggaaactgcaaaaacggggggaaatgtgtgaacggtaagtgtgtgtgtgatagc
agttttacaggcccagactgctccaccaagtcctgccctggcaactgcagcaaccgtgga
aagtgtgtgaacggccaatgtgtctgcgatagcggctttacggggccggactgttccgcc
aaagcatgtcccaataactgcagcaacaagggaaggtgcgtgaacgggaagtgcgtgtgt
gaagtgggcttcagcggacaggactgcgccgctaagggctgtcccaataactgcagcaac
aaagggcgctgcgtgaaggggaggtgtgtgtgtcgccgtggtttcgcccccccggactgc
agccagtgtgaagctgggttcactggagctgactgtggcaccgccatgtctggtgtgtcc
cagctcaacaccaaggacatcactgaatcctctgttaccctctactggacaccacctcca
gtccagtatgacacctaccacgtcaccttcgccagccagaaagagggcgatcaacagata
acatctcaagttggagggaagctcacgacctacacccaaacaggactggcggccgggcag
gagtacacggtgacaatcaagggagaaataaataggagaatgggcactgagagcacagta
gaattcacaacccttatctctggacccacaaaccttcgagttgtgaagacaaccacaaca
tctgcagttgtccaatgggaacaatcgcaaggacacgtcgacaggtatcgcttaactgtt
gcacccaatcagacagacggaacagccaagggaagacaagacctgaccctgccccctgag
agggactctgcccagattgacggtttggacccgggacatttgtatgacatcacactagtg
gctgaaaagggcgggatcaagagcaagccagcaacagtccaagtcactcctggtccagag
cctccctcaggtcttgtcttcagtgaagtgactgagacgtctttctctgtgtcctggaca
aagccaaaaggtcccgtgagtggcttcaaggtcacctacactaacacacaggaaggggag
cctctctccgcaacggtggactctggggattccactctggcactgtcaaagctctctcca
gggtcctcctatgaggtcagtgtgatatccgtccttggactggacgagagcgatgcaatc
aaagacctggttatgacactccctgaccctccgagggatctccgggccattaatgtcaca
gacaccaaggccttgctgctatggcgaccagcactggcaacagtcgaccgttacgtcata
gtttatggctctgaaaaagggtcagatgatgccaagatcactgtatcgggcaatgcggcg
gagcagcagctgaaaggcctacagggctccactaggtacaccgtcacagtcaccagtcag
ctgggcaacctggacagctctgccgccatcaccgtcttcaccaccaccggtggatccagg
ggagacggggaagttccgcgtgacctgaaggccagtcaggtgactcctcgctcagcgctg
ttgacgtggaaagcaccctctgccgccgtgggaagctataagctgacctatcaaacggag
ggacaggagataaaggaggttaccattgactccacagtaacagagttcaaattgaccagg
ctgcatcccatgtccaagtacaccgtgcatctacagggggagaggggagggagctatact
gctacaatttccactgagttcaccacagggaatctccgataccccttcccaagtgactgt
tcccaggagctgctaaacgggatacacgagtctggagaggtggagatcttccccagggga
aggcaggggaaaccagtgctggtctactgcgaccaggtgactgatggaggtggctggacg
gttttccagagaaggatggatgggaaaacggacttcttcagaggctggaaaaactacagc
aaaggttttggagaactgagtggggaattttggctgggtaatgagaacctacacaatcta
accagcatggcaccaatgaccctacgtgtggacctccgtgcaggggacgaatcagtgttt
gccaagtactctgcatttacagtggacactgttagaaggaactatgctctcaaagtgtct
gggtacagcggtacagcaggtgactctatgagttaccacaacgcgcgcatgttctctacc
agagacagagaccccacgcctttcatcacccgctgcgccatgtcctatagggggggttgg
tggtacaagaactgccacgaggccaaccttaatggcctctacgataccagtgtcaatcac
cagggtgtgatctggactgcctggaaaggcaaggacttgtccatccctttcaccgagatg
aagctccgaccaacatctttcacccctccaactcagggataa
DBGET
integrated database retrieval system
