Oncorhynchus kisutch (coho salmon): 109903650
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Entry
109903650 CDS
T09179
Name
(RefSeq) nestin isoform X1
KO
K07609
nestin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109903650
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
109903650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
109903650
NCBI-ProteinID:
XP_031645580
LinkDB
All DBs
Position
LG2:complement(18675599..18685312)
Genome browser
AA seq
1854 aa
AA seq
DB search
MELHSLRHHHSHRTDNKLQMLNLNQRLETYLGRVRLLEEENKLLCQELQALRVSGQGGRM
GLEDKLSLARQEVEEAWREKDRVELELGSLGEELQVLGLQRQWEADAHGEVKKKLADSRK
QMEEERRAQIWLREKVSQLEKQIQFQIQTHQEDVAGFQATLIHVRPALPPPPPQTGTQLP
SLQDLGEEYSQMAVRAWHEAAMVFQGQVDSLDESLNQARTRLAQVGQEKIESQLKLQALE
NELQSAQDRRQCLERSVAKQRDMQRQEIQNLQAHLEVLEMEKGALGNQIDTLLTESRGLV
QLKMSLGMEVATYRALLDNKSLMGDFSSTNQLRSTYTSDGVPSSRGVKQSFQTQLATSHM
ISPFSTIHRASPRSNVTTMSASPIWTQNQVTLNETPDSCRKTEEEHVDFDLVSNRQVIWS
TPYPKVPQDGISVDHFRPQDVHEEVNYAEPLSPPTEEAGADVVSWLGSDHKEQSMWDLEK
EEEDQNIVRTWVAKDKPVLEPAMSHQVEISFSMPTVFSTDAQELYSPSVSDERAGSVTGA
HSAFSANDDNDVPFETSSEKEEPLLDLPYGPMNALEERDLETARKDAEWVGKEGLESETK
SVLEPAFETFTSSQAFEYNKPKEFNQEDNMSYASTQASHGSEEAFHHVKRVDEDVINLTK
EDDENYMSNKDEEQLEDELHPYGYGKDDCERLAGFNKENCVTERIDKFNREAIISYESAQ
ASHWSEEVFHHVERLEEGDINFTKGDDENDMYNKREIQYALHPNGNVNDEWDRVGGYTEE
NGIRERMDEGKDHMKEEEMWNNRETQPNQSDQEHIHSNVEKLNQFEQEHIPLGREKRNLS
DNDKEDHDEANYCQNTSVSWRAELEDDSYAQDNTLADTHPLIRYKSDETDANTQASHMGE
SDSSDGEQDREVCQTGSGTWGEVKSKQFDTMEDLYEESEGDVIDQERNVGSTHQEDMDAS
QTKEHATQENDKENAVDQLIQEAEEEQSYEELTEPGEYSMMCSDEDNNEERIDRLVEQEL
ENLSISSYSEHFNGQMIESESVLSLQIVSHTELSQTQDILYSEEVEQIHSVRLNQSEQEH
TTTGGEKLNQSEQEHTTSGGEKLNQSEQEHTTTGGEKLNESEQEHTTTGGEKLNESEQEH
ATSGREKLNQSEQEHTTSGGEKLNQSEQEHTTSGGEKLNQSEQEHTTSGGEKLNQSEQEH
MTSGGEKLNQSEQEHTTSGGEKLNQSVQEYINSGREKLNQSEQEYIPSDGEKLNQSEPEY
ITSGEGKMYQSEQDHIPSDEEKLNQSEQENIPLSGEKLNESEQEYLPSDGEKMNQSEPEY
ITSGREKPNLYAQEHIPSSREKLNQSEHEHIPSNGKKLNQSKQEYVPSGGENLNLYEQEP
IPSDGEKMNQSEPEYITSGREKPNLYAQKHIPSDREKLNLTEQDNIPLGGEKLNQSEPEY
ITSGGENLNKSEQEHIPSNGEKLNQSQQEHIPLGGEKIHQSVPEYIPQGKENMNQSEQEN
ITSDREKLNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSEPEY
IPSGGEELNQSEPEYIPSGGEELNQSEPEYIPSEVMYSMHSRIRMTPEHTSLRESSAEIS
KEEYLAQGKVFSEELGTEAVPDKIEGQDDQNLSMLTHEDFTESHSIHSSLNSRPESQTNI
NNSDIEESNSTDDESPNASQYLQRANKANLTADQEDLLDVAVSHYEDCNTLIEHSAEEVT
SYQASHECLQTDRWEVLESPNKHLESGDPFAGHKRDSERSSKTDSKGQDLHSFLSSGVHS
NFWGSNLETGASYQPDEPYDHVTKLPNQNLALADNLSWVDLESTGGQLEHKDGQ
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggagctacacagcctccgacaccaccacagccaccggaccgacaacaagctccagatg
ctgaatctcaaccagcgcctggagacctacctgggccgagtgaggctgctggaggaggag
aacaagctactatgccaggagctccaggccctgagggtcagtggccagggggggcggatg
ggcctggaagacaagctgagcctggccaggcaggaggtggaggaagcctggagggagaag
gaccgggtggagctggagttagggagcctgggtgaggagctccaagtcctggggctgcag
agacagtgggaggcggacgcccatggggaggtgaagaagaagctggcagacagcaggaag
cagatggaggaggagaggagggctcagatctggttaagagagaaggtgagccagctagag
aaacaaatccagttccagatacaaacccaccaggaagatgttgccggcttccaggctaca
ctaatccatgtcagacctgcactgccaccccctccaccccaaacgggcacccagcttccc
agcctccaggacctgggtgaggagtactcccagatggctgtcagggcgtggcatgaggcg
gccatggtgtttcagggccaggtagacagcctggacgagtctctaaaccaggccagaacc
cggttggcccaggtgggccaggagaaaattgagagccagctgaaacttcaggccctggag
aatgagctgcaatcagcccaggatagaaggcagtgtctagagaggagtgtggccaaacag
agagacatgcagaggcaagagatacaaaacctgcaggcccatctggaggtgttggagatg
gagaagggggcgctgggaaatcagattgacactcttctgacagaaagtaggggcctggtg
cagctgaagatgtctctaggcatggaggtggccacatacagagctttactggacaataaa
agtctgatgggggatttctcttcaacaaatcagctaaggagtacctacacatctgatgga
gtccccagctctcgaggggttaagcaaagcttccagacacagctggctaccagtcacatg
atcagtcccttctctaccatccatagagcaagcccacgatccaatgtaacaacgatgtcc
gcatcaccaatctggactcaaaaccaggtaaccctgaacgaaacacctgatagttgtcga
aagacagaggaagagcatgttgactttgacttagtgtccaaccggcaggttatttggtca
acgccttaccccaaagtaccacaggatggaatttcagtcgaccacttcagaccccaagat
gtccatgaagaagtcaactatgctgagcctctctcacctcccactgaagaggcaggagct
gatgttgtatcttggcttggttctgaccataaggaacaatccatgtgggatttagaaaag
gaggaagaggatcagaacatagtcagaacctgggttgctaaagacaaaccagttctggaa
cctgccatgagtcaccaggttgagatcagcttcagtatgccaactgtgttcagcactgat
gctcaagagctctacagtccttcagtgagtgatgagagagcaggttcagtgacaggggca
cattctgctttctcggcaaatgatgataatgatgtaccttttgaaacgtcttctgaaaag
gaggaacctctactagatctgccttacggtcccatgaatgcattggaggaaagagatctc
gaaacagcaaggaaagacgctgaatgggtggggaaagaaggcttggagtctgaaactaaa
tcagtgctagagcctgcatttgagaccttcacaagcagtcaagcttttgagtacaacaag
ccaaaagagttcaatcaagaggacaatatgtcatatgcatctactcaagcctcccacggt
tcagaagaggcatttcaccatgttaaaagagtggatgaagatgttattaatctcacaaaa
gaggatgatgaaaactacatgtctaacaaagatgaggagcaattggaagatgaattgcac
ccatatgggtatggtaaggatgattgtgaaagattggcagggttcaataaggaaaattgt
gtgacagaaagaatcgataagttcaaccgagaggcgattatctcatatgaatctgctcaa
gcttctcactggtcagaagaggtatttcaccatgttgaaagactggaggaaggtgatata
aatttcacaaaaggggatgatgaaaatgatatgtataataaacgtgagatacaatatgca
ttgcaccccaatgggaatgtaaatgatgaatgggatagagtgggaggatacactgaagag
aatggaattagagaaagaatggatgaaggaaaggatcatatgaaagaggaagagatgtgg
aataacagagaaacccaaccaaatcagtctgatcaagaacatatacattcaaatgtagag
aaactgaatcaatttgagcaagagcatatacctttaggcagagagaaacggaatctatcc
gacaatgacaaagaggatcatgatgaggcaaactactgtcaaaatacttctgtttcatgg
agggctgagctagaagatgacagctacgctcaggacaacacactggccgacacacacccc
ctgatccgttacaagagtgacgagacagatgccaacactcaggcttcacacatgggagaa
agtgactccagtgatggtgaacaggacagggaggtttgccagacaggatcaggcacctgg
ggcgaagtcaagtccaaacagtttgacaccatggaggatctgtatgaagagtcagaaggg
gatgtcatagatcaggaacgtaacgtgggctccactcaccaagaggacatggatgctagc
caaacaaaggagcatgctacacaggagaacgataaggagaatgcagtagatcagttgatt
caggaggcagaagaggaacaatcctatgaggaacttacagaacctggagagtactccatg
atgtgctctgatgaggacaataatgaagaaagaattgatagattggtggagcaagagtta
gagaatttatctatatccagttacagtgaacactttaatgggcagatgattgagagcgag
tcagtactgagtcttcaaattgtgtctcacactgaactttcccagacacaagacatatta
tacagtgaggaggtagagcagatacactcagtgagactgaatcaatctgaacaagagcat
acgaccacaggcggagagaaactgaatcaatctgaacaagagcacacgacctcaggcgga
gagaaactgaatcaatctgaacaagagcatacgaccacaggcggagagaaactgaatgaa
tctgaacaagagcatacgaccacaggcggagagaaactgaatgaatctgaacaagagcat
gcgacctcaggcagagagaaactgaatcaatctgagcaagagcatacgacctcaggcggc
gagaaactgaatcaatctgagcaagagcatacgacctcaggcggcgagaaactgaatcaa
tctgagcaagagcatacgacctcaggcggcgagaaactgaatcaatctgagcaagagcat
atgacctcaggcggagagaaactgaatcaatctgaacaagagcatacgacctcaggcggc
gagaaactgaatcaatccgtgcaagaatatataaattcaggcagagagaaactgaatcaa
tctgaacaagagtatataccctcagacggagagaaactgaatcaatccgagccagagtat
ataacttcaggagaagggaaaatgtatcaatccgagcaagaccatataccctcagacgaa
gagaaactgaatcaatccgagcaagagaatattcctttaagcggagagaaactgaatgaa
tctgaacaagaatatttaccctcagatggagagaaaatgaatcaatccgagccagagtac
ataacttcaggcagagagaaaccaaatctgtatgcgcaagaacatataccctcaagcaga
gagaaactgaatcaatctgagcacgagcatataccttcaaacggaaagaaactgaatcag
tctaaacaagagtatgtaccctcgggcggagagaacctgaatctatatgagcaagaaccc
ataccatcagacggagagaaaatgaatcaatctgagccagagtacataacttcaggcaga
gagaaaccgaatctatatgcgcaaaaacatataccctcagacagagagaaactgaatctc
accgagcaagataatatacctttaggcggagagaaactaaatcaatccgagccagagtat
ataacttcaggcggagagaatttgaataaatctgagcaagagcatataccttcaaacgga
gaaaaactgaatcaatcccagcaagagcatatacctttaggcggagagaaaattcatcaa
tccgttccagagtatataccccaaggcaaagagaacatgaatcaatccgagcaagagaat
ataacttcagacagagagaaactgaatcaatctgagccagagtatataccctcaggtgga
gaggaactgaatcaatctgagccagagtatataccctcaggtggagaggaactgaatcaa
tctgagccagagtatataccctcaggtggagaggaactgaatcaatctgagccagagtat
ataccctcaggtggagaggaactgaatcaatctgagccagagtatataccctcaggtgga
gaggaactgaatcaatctgagccagagtatataccctcagaggttatgtattcaatgcac
tctaggattcgaatgacacctgaacacacatctcttagagaaagttcagcagaaatatcc
aaagaagaatatttggctcaaggtaaggtcttcagtgaggaactgggaactgaagctgta
ccagacaaaatagaaggacaggatgaccagaacctttctatgctgactcatgaagacttt
actgaaagccattctatccacagcagtttaaacagcaggcctgagagtcaaaccaacatt
aacaactcggatatagaagagtccaacagcacagatgatgagtctccaaatgcaagccag
tatttgcaacgtgccaacaaagcaaatctaactgcagatcaggaagacttgttagatgtg
gcggtctctcactatgaggattgcaatactcttatagaacattctgcagaggaggtcact
agctatcaggcaagtcatgaatgtcttcagacagacagatgggaagtcttagaaagtcca
aacaaacacctggaatctggagatccttttgcaggtcacaagagagactcggagagatca
tccaaaactgacagcaaaggccaggacctccacagcttcctcagctctggtgtacacagc
aacttctggggttccaatctggaaacaggagcctcctatcaaccggacgagccatatgac
catgtgaccaagctacccaatcagaacctagccttggctgataacctatcctgggtggat
ttggaatccacaggcggccaattggaacataaagatggacagtga
DBGET
integrated database retrieval system