KEGG   Oncorhynchus kisutch (coho salmon): 109903654
Entry
109903654         CDS       T09179                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109903654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109903654
Spliceosome [BR:oki03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109903654
 Complex B
    109903654
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 109903654
NCBI-ProteinID: XP_020356092
Ensembl: ENSOKIG00005015133
LinkDB
Position
LG14:54518676..54537723
AA seq 474 aa
MSDFDEFERLLTENKKERDKENRHGWRTPSRSLSRERKKRCRERRKSRERRGNSKERRRH
RRSIQTQKQSQETVVSRSPALHREKKKKVRKYWDVPAPGFEHITPLQYKAMQAAGQIPAT
ALLPTMITPEGLPPAPTSVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMCLGGL
TQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM
SESPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATAL
SKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGAKNAALTGMNQTPVTLQVPG
LMPTSMASLGGLPTEVLCLMNMVAVEELLDDEEYEEIVEDVRDECGKYGQVKSIEIPRPV
DGLEVPGTGKIFVEFMTLFDSQKAMQALTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgtcggattttgatgaattcgagagattgttgactgaaaataagaaagagcgggacaag
gagaatcggcatgggtggcgtaccccgtcccgcagtctcagccgagagaggaagaagagg
tgccgggaaaggaggaagagcagggaaagacgtggcaacagcaaggaacgtcgtcgacac
aggcgcagcatacagactcaaaaacaatcccaagagactgttgtgagtcgctctccagct
ctgcacagagagaagaagaagaaagtgaggaagtactgggatgtcccggcaccaggcttc
gagcatatcacccccctgcagtacaaggctatgcaggctgctggccagatcccagccacg
gccctactgcccaccatgataactccagaggggctgccccccgcccccacctctgtaccc
gtggtgggcagccaaatgaccaggcaggccaggaggctctacgtaggcaatataccgttt
ggcatcacagaggaagcaatgatggatttcttcaatgcccagatgtgccttggcggactc
acccaggcccctggcaaccctgttctagctgtacagataaaccaggacaagaactttgcc
ttcctcgagttccgctcggtggacgagacgacccaggccatggcctttgacggcatcatc
ttccagggtcagagcctgaagatcagacggcctcacgactaccagcccctgcccggcatg
agtgagagccccagtgtctatgtaccaggagtggtttcgaccgtggtgccagactcagcc
cacaaactcttcatcggtggcttgccaaattaccttaatgatgatcaggtaaaagagcta
ttgacctcatttggccctctgaaggccttcaacctggtcaaagacagcgccacggccctc
tccaagggctacgccttctgtgaatatgtggacgtcaatttgaacgaccaggcaattgca
gggttgaatgggatgcagctgggggacaagaagctcctggtccagagagccagtgttggg
gccaagaacgcagctctgacgggtatgaatcagaccccggtgaccctccaggtgccaggc
ctgatgcccacctccatggcttcgctgggtggcctacccactgaggtcctctgcctgatg
aacatggtggctgtggaggagctgctggatgacgaggagtacgaggagatcgtggaggac
gtccgggatgagtgcggcaagtacggccaggtgaagagcattgaaatcccccggcctgtg
gatggcctggaggtcccaggcactgggaagatctttgtggagttcatgacgctgtttgac
tcccagaaggccatgcaggcgctgacaggcaggaagtttgccaacagggtggtggtgacc
aagtactgtgacccagacgcttaccaccgccgagacttctggtag

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