Oncorhynchus kisutch (coho salmon): 109903681
Help
Entry
109903681 CDS
T09179
Name
(RefSeq) elongation factor 1-alpha, oocyte form
KO
K03231
elongation factor 1-alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109903681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109903681
03016 Transfer RNA biogenesis [BR:
oki03016
]
109903681
03012 Translation factors [BR:
oki03012
]
109903681
04131 Membrane trafficking [BR:
oki04131
]
109903681
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109903681
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109903681
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109903681
Translation factors [BR:
oki03012
]
Eukaryotic type
Elongation factors
109903681
Membrane trafficking [BR:
oki04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
109903681
Exosome [BR:
oki04147
]
Exosomal proteins
Proteins found in most exosomes
109903681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
109903681
NCBI-ProteinID:
XP_020356132
Ensembl:
ENSOKIG00005016848
LinkDB
All DBs
Position
LG14:53859493..53863337
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVTTYIKK
IGYNPATVAFVPISGWHGDNMLEASANMGWFKGWKVERKDGNANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacattaacatcgtggtcattggccatgtcgactccggcaag
tcaaccaccacaggccatctgatctacaagtgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagcagctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccattgacatttctctgtggaagttt
gagaccggcaggtactacgtcacaatcattgatgcccctggacacagagatttcatcaag
aacatgatcactggtacctctcaggctgattgcgccgtgctggttgttgccggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaaacagctcattgttggagtcaacaagatggactctactgagccc
ccctacagccagaaacggtttgaggagatccagaaggaggtcaccacctacatcaagaag
attggctacaaccctgccactgtcgcctttgtgcccatctctggttggcatggggacaac
atgctggaagccagcgccaatatgggctggttcaagggatggaaggtcgaacgtaaggat
ggtaacgccaacggtgtgactctgctggaggccctggactcaattctgcccccctcccgc
cccactgacaagccccttcgtctgcccctccaggatgtctacaaaatcggcggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgttaccttc
gcccccgctaatgtcaccactgaggtaaagtctgtggagatgcatcacgagaccctggaa
tcggccatgcccggtgacaatgttggcttcaacgtcaagaatgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaaaaatgaccccccaatggaggccggcaccttc
accgctcaggtcatcatcctgaaccaccctggccagatctcccagggctatgcccctgta
ctggattgccacactgctcacatcgcctgcaagttcagcgaactcaaggagaagattgac
cgtcgttccggcaagaaacttgaggatgcccccaagttcctgaagtctggagacgctgcc
atcgttgacatgatccccggcaagcccatgtgtgtggagagcttccaggaataccctcct
cttggtcgtttcgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaaggcc
gtcgacaagaaggctgcctccagcggcaaggtcaccaaatctgccgttaaggctggtaaa
aagtga
DBGET
integrated database retrieval system
