Oncorhynchus kisutch (coho salmon): 109903721 Help Entry 109903721         CDS       T09179                                  Name (RefSeq) helicase SKI2W-like isoform X1   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki03018   RNA degradation Brite KEGG Orthology (KO) [BR:oki00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109903721  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oki03019]     109903721 Enzymes [BR:oki01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      109903721 Messenger RNA biogenesis [BR:oki03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      109903721   mRNA degradation factors    3'-5' decay     Ski complex      109903721 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD Helicase_C DEXQc_Suv3 ResIII MTR4-like_stalk DUF3516 HTH_23 Motif Other DBs NCBI-GeneID:  109903721 NCBI-ProteinID:  XP_031644400 Ensembl:  ENSOKIG00005009139 LinkDB All DBs Position LG14:complement(51989747..52022276) Genome browser AA seq 1250 aa AA seqDB search MERIDLPAVGPTDLPISLLEMGCSGRFELITHPHPNDQPLPPQSSLPHGLPPTSVSLETE VEKRFLRNPAWLPIHDTDAAFHRFLKLAERDVHIDSLLHCALSPLHSGISVVRDPTTGML LDFTEVLLGDTGISAKNSMSLQRPPNPNPSESLRGSNTNYPFLPGGMEELTLEQIKKKSE LEEDIDFEKELLTVPPGLKVGMDFSDKDAKTTKGEINLLSLLSTFDDIIDSQPEAEEKEK GHGSGNAPKLPRTNSLEDLGIKDSPSTPGTTSTEKKDGGTTKPTGDQEEKKRWAIPINIT SPCDDFYKRIPNPAFKYPFELDVFQKQAVLRLEAHESVFVAAHTSAGKTVVAEYAIALSQ KHMTRTIYTSPIKALSNQKFRDFKTTFGDVGLLTGDVQLSPEASCLIMTTEILRSMLYNG SEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNAVEFSEWIGRI KKKHIYVISTAKRPVPLEHYLYTGNSTKTQKEMFLLLDPTGNFQTKGYYAAIDAKKERTS KHTQSFGTKNPSQNTTPSQDRAVWLSLLHFLSQRQQTPVVAFTFSRTRCDDNARSLASMD LTSSVEKSEIHSFFQKSLRRLRGGDRQLPQILLIRDLLKRGIGVHHSGILPIMKEVIEML FSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLD ATGTVIILCKSGVHDMGDLNVMMLGKPTVLQSQFRLTYTMILNLLRVEALRVTDMMRRSF SESHRDTQAHEQQIGQLKQTLSSLPPLDTEGQLSDLLPYYYTVTELRLTAEALQCAVLGS VNGLKALSVGRVVVVNNKQHFNALGVILQVSSDSVNRTFIALIICEKGNEEGIGDSPKGS AFPHLYNTALFTPEGPCSHTVQKLKLQDVSAITVKTLKVIPDRIIDNYNKRQQLRFRLDP PGQAISTATQELLRLAEANPGGMMTLDPVNDFQLKSVDVVEGTMRLRVLQDSLKDFSCIH SPTFSEQFLRVQERMSVQEELDKLLFLISDQSLSLLPEYHQRIKVLQSLQYVDSSGAVQL KGRVASQISSHELLLTELLFENALSPLAPEESAALLSCLVFQQKTQVEPHITNTLKEGIE RVLAVAQRIGELQRDCGITQTAEEYVGQFKFGLTEVAYCWARGMPFAEIAQLTDVQEGTV VRCVQRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLYTH NT seq 3753 nt NT seq  +upstreamnt  +downstreamnt atggaaagaatagatctgcccgctgtgggccccacagacctccctatatccctgctggag atgggttgctctggcaggtttgagctcatcacacatccacatcccaatgaccagcccctg cctccacaaagttcgctccctcatggactccctcccactagtgtgagcctggagacagag gtagagaagcgctttctacgcaaccctgcctggcttcccattcacgataccgacgctgcc ttccataggtttctgaagctggctgagagagatgttcatatagactctcttctccattgt gctctgtctcctctgcactctggcatctcagtagtcagagatccaacaacaggaatgttg ttggacttcactgaggtgttactgggggacacgggcatctctgctaagaattctatgtcc ctgcaacgtccaccaaaccctaatccctctgagagcctacgaggaagcaacaccaactac ccgtttttgcccggtggtatggaggagctgacactggaacaaatcaagaagaaatccgag ctggaggaggacatagactttgagaaagagttactcacagtgccccctggactgaaagtt gggatggacttcagtgacaaagatgccaaaaccacaaagggagaaatcaatctcctgtcc ctcctgtccacctttgatgacatcatagactcccagcctgaggcagaggagaaggagaag ggccacggaagtggaaatgcacccaaactgcccagaaccaacagcctggaagacctgggg atcaaggactctccctctacacctgggaccacctctacagagaagaaagatggaggaacg accaaaccaacaggggaccaggaggagaagaagagatgggcaatcccaataaacatcacc tccccctgcgatgacttctacaaacgtatccctaaccctgccttcaagtatccctttgag ttggacgtgttccagaagcaggcagtattgaggctggaggcccatgagtctgtgttcgtg gcagctcacacatcagcaggcaaaaccgtggtggcagaatacgccatagcactctcacag aagcacatgaccaggaccatctacacctcccccatcaaggcgctgtccaatcagaagttc cgggacttcaagaccacctttggggacgtggggctgctgaccggggatgtccagctgagt cctgaagcctcctgtctcatcatgaccactgagatattgaggtccatgctctataacggt tcggaggtcatcagagatttagagtgggtgatctttgacgaggttcactacatcaatgat gctgagagaggagtggtgtgggaggaggttctgatcatgttacccgaccacgtcagcatt attcttctgagtgccactgtccccaacgctgtggagttcagtgagtggatcggacgcatt aaaaagaagcacatctatgtgatcagcacagcgaagagacctgtgcctctggagcattac ctgtacacaggcaacagcaccaagacccagaaggagatgttcctactgctggaccctacg ggcaacttccaaaccaaagggtactacgctgctatagatgccaaaaaggaacgcaccagt aaacacacacagtcttttgggacgaaaaatccatctcagaacactacacctagtcaggac cgggcagtgtggctttccctcctccacttcctgtcccagcgccagcagacccccgtggtg gcgttcaccttctccagaacgcgctgcgacgacaacgcccgctctctagcctccatggac ctcaccagctcagtggagaagagtgagatccactcctttttccagaagagcctgagacgc ctcaggggaggggaccgccagctgccccagatcctgttgataagggacctactgaagagg ggtatcggtgtgcatcacagtggcatcctgccaatcatgaaggaggtcattgagatgctg ttctcgcgggggctagtaaaggttctgtttgccactgagacgtttgctatgggagtgaac atgcctgcgaggacagtggtgtttgacagcatacggaaacacgatggcaccggcttcaga aaccttctgcctggtgagtatatccagatggctggtagagcgggtaggagaggtctggac gccacaggcactgtcatcatcctctgcaagtcaggggtacatgacatgggggacctaaat gtcatgatgctggggaagcccacagtgctgcagtcccagttcaggctgacctacaccatg atcctcaacctgctgcgtgtggaggccctccgagtcaccgacatgatgaggaggagcttc tctgagagccacagagacacacaggcccatgagcagcagattggtcagttgaaacagact ctgtcctctctccctcctctcgacacggagggtcagctgtctgacctactgccgtactac tacactgtcactgagctacgcctcactgctgaggctttgcagtgtgctgttctggggtct gtgaatgggttgaaagctctctccgtgggacgagtggtagtggtcaacaacaaacagcac ttcaacgccctcggagtcatcctacaggtttccagtgactcagtgaatcgtacgtttatt gctctcatcatctgtgagaaaggcaatgaggagggaataggggacagtcccaaaggcagt gccttcccccacctctacaacactgccctctttacacctgaaggtccctgcagtcacacg gtccagaagctgaagctacaggacgtctcagccatcacagtcaagaccctgaaggtgatc cctgaccgaatcatcgacaactacaacaagaggcagcagctgcgcttcaggcttgatcct ccgggtcaagccatctccacggcaacccaggaactcctgcgattggcggaggccaaccca ggcgggatgatgacccttgacccagtgaacgacttccagctgaagagtgtggatgtggtg gagggcaccatgaggctgcgtgtgctgcaggacagcctgaaagacttcagctgcatccac tcacccaccttctcagaacagtttctgcgggtgcaggagagaatgagtgttcaggaggag ctggacaaactgctcttcctcatctcagaccagtccctgtctctactgccagagtaccac cagagaatcaaggtgctccaatccctgcagtacgtggacagtagtggtgcggtgcagctg aagggcagggtggccagtcagatcagtagccatgagctgcttctcacagagctactgttt gagaacgccctgagccccctggcccctgaggagagcgccgccctactgtcctgtctggtc tttcaacagaagacccaggtggagcctcacataaccaacacactgaaggagggtattgag agagtgctggcggtggcccagcgtattggggagctgcagagggactgtgggataacccag acagcggaagaatatgtgggccagttcaagtttggcctgaccgaggtggcctactgctgg gccagaggcatgccatttgcagagattgcccagttaacagacgtccaggagggcacggtg gtgcgctgcgtccagagactagacgaggtgctgaaggaggtgcgccaggcagcccgcatc gtgggagactctgtcctgggcagcaagatggagaaggcctccctggccatccgcagagac atcgtgttcactgcctcgctctacacacactga

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