Oncorhynchus kisutch (coho salmon): 109903760
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Entry
109903760 CDS
T09179
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109903760 (sec16a)
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109903760 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
109903760
NCBI-ProteinID:
XP_031658882
Ensembl:
ENSOKIG00005045834
LinkDB
All DBs
Position
LG23:181960..251500
Genome browser
AA seq
2430 aa
AA seq
DB search
MASAMLQQLSYSPSLSSTSLVTSLSSGLVLGPVRTAAMQPPPRTGPPGASGPPPAGVGPN
AFRRTRPHKHTGAAVMAGLTAQPMTDPFAFGRQAPPPMATGHLPPPNNSPLPLQALPPGM
YHQAGMGQGLHQPQPLDSAQAGAVPLGPPPPSTPGVSILTPHGTASPVPFPGQQPGPPGH
APPSAEQGYFNSREPAPSMTPGHLPMASAPMSGQAPYGQDHGGDHHPQAMPFKPVPPVLS
QWVPDHGSRPPSVQNYFQPTSDPLPQVCNAPPQSQISPHTPLPHNTPPTHPQQQHQPQPP
PQHPDRPTSSQWPDLAGANTPQQHNAHFQAQTYFSQSSDTLDSWFNQHPQDLVYHQMGAG
PGLARPDSARTHYRHDSAGSHHGSHYGSYHASTPGPAPVPFIPDGTISMFFKGNDVENEE
TLAGEGARAVNGLQDFQPSHNHQQMSSPQPQANPVVGAEATHSYRGPPPQAGQSLTYMND
GNFPGAGKPIQQKPAEAQFDHVENLECVPNQEVLPSEPQSNPAVAAAHGGDCYEAGPNLE
TPDSVPRPIRSASVSSSYSNLSHGSGTGTVPRRHQGVVGTFIQQESPRPSEDAFSSAAAG
GYFEQIDTSPAGDMAVAYQSIPERMCHSQPPTPSPPKPTGIFQASANSSFEPVRSHSVAV
RPAEVDRARMVAERGSDSLPGNLEQPPDNLENIYGAATGHTQAGDGAGAPPLAYPLSHSH
SRPSSRAHVAHRPCESPATTLWAQHDPASLGTNILLVPAAPPVLAPLREPSAEVIQPPED
GSLDLQPPQHAPPPSQHPSENLENPPKVSEGDTSDSQPNLGYASLLVSESLHQPVLIAPP
TSNYSVIPPSNPALAANQVSPREATVPVRPPSQAQGASAAQPGPPLRSNQNPLFAPTPMS
FSVASSQSPLNLVRDDREGVKPEITPPPSQSQPARSPLSKVQSTCRNNHSSLPVNLQAPL
PAAPGAANYNQLSNYELLDFSMHQSQIPNQAAGLPPLSLQQGPPLASNAPGFYLQVTKDA
QQVSRGNGDASTAQMPADPMPPPVAPNTQQPPSEPPMVPQPGHQGQGDDPAAPLSGAPPP
QGQYPTPMQGPATGNAPTPSAAYPGPRGHVPLANPHPPGTGVPSAQPAPTDPPRPPSSLG
SQLGYGPPPPGQVYGGYYGGAYPEYPDGRGSYLPAQYPPAPVDPRAQQYYQDDPYMIADP
RYGRYEGANPAYPPYREPQPERPSSRTSQYSDRPSSRQGFPPEEYQRANRSAYDDYYAEY
YKNQYGDRSRWEGYNASAGTYDPRYRDYYDQNYWYNYNPEAYRGREAAYYNQHPSQQYPA
ATTRPQGYDDKWRYYPGYDASFDDDYRRQRDQYKDDFDRRSVHSEQSAHSLHSSQSHRSR
RSSFSSRSQQSEVYRSQPDLTAVYDPTVSTLPVDYSYGQYPEQMDPGQSFSQYPYTSGYQ
ADNSTWVVAEQPPPRPVTPEKYSVSHRCARFGPGGQLIQVLPNLPSAGQPALVEIHNMET
MLQDTPDQSELRSFPGPLLKEETHKVDVIKFSQNKGLECARNNDLLDKDSAALLWDFIVL
LCRQNGTVVGTDIADLLLKEHRSVWLPGKSPNEANLIDFNNEPLARAEEEPGTGPLSLLS
DTFMTVPENIGKETERFRELLLFGRKKDALEAAMKGALWGHALLLASKMDSRTHARVMTR
FANSLPINDPLQTVYQLMSGRMPASATCCGDEKWGDWRPHLAMVLSNLTHTLDLDTRTIT
TMGDTLASKGLTDAAHFCYLMAQVGLGVFTKKSTKMVLIGSNHSLSFFQFASNEAIQRTE
AYEYAQSLGSQPCSLPNFQVFKLIYACRLAEAGLCAQAFHYCEVISRSVLMQPSYHSPVF
TSQLMQMSEKMRFFDPQLKEKADQELFNEPEWLINLRQLDGQMRTGVIVYNADRATPQQY
DCSTPNSELDQTSPPEPYAHPLDMVGHTSDNPLMTSLMPGPPQQGVQLMPPAPPTILQDG
MDSQPPHPNEGVQFYPVPPSLPGPPGQIPLSGFPPQGSGFVQPYQPQQPQPDKKDMFPGA
QHQQMAPPQHQQQMMPPQMQQPQKMPSDNYQPTGPPELQPPPMSTSPQRNTFTPQMDFYD
QMAHMGPGRRSRTTSQSSMQMQPPGRRSRTMSESSTHSGGRERSNSAAKQSSPPPPSIPE
QAKKDSPKKGGGGGGGGWLNWLYRKGKNEAHLPDDKNKSIVWDEKKQKWVNLDEPEEEYK
PPPPPPSGFPKMLGPIPGQGGPGGPPTGGPPVNMFSRRAGTKSRYVDVLNPGGPRAKPGG
SAPAPSDFFAPLAPMPMPANLFVPGAEEQQPMVGNVPETGGNQEQSDPNPSAVPQMFNPT
LLPPGPVGPPIAAGSPSGELSRSSSMSSLSLELSPHINQVPPTPQPPPQGAPPSGGVTFY
NPAQFAQASTPSGRLLSGRLGGQRAYPVLK
NT seq
7293 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgccatgctccaacaactgagctactcgccaagtctgagctcaacctcttta
gtgacgtcactatcgagtggcctggtccttggacctgtcagaactgcagccatgcagccc
cctcctcggaccggcccccctggtgcatccggcccccctcctgccggcgttgggcccaat
gccttccggaggacaaggccccacaagcatacaggagcagcggtcatggcgggactaaca
gcccagcccatgacagacccctttgcatttggcaggcaagcccctcctcctatggctaca
ggtcacctgccgccacccaataacagccctctgcctttgcaagccctgcctcccggtatg
taccaccaggctggcatgggtcaggggctgcaccaaccacaaccactggatagtgcacag
gctggggctgtgccccttggcccaccaccgccctctacccctggggtaagcatcttaacc
cctcacggtactgcgtcccctgtccctttccctggacagcaacctggcccgccaggccat
gcaccaccaagtgcagagcagggctattttaactctagggagccagcaccctcgatgacc
ccaggacaccttcccatggcctcagcccctatgtctggccaagcgccttatggtcaggac
cacggaggagaccatcaccctcaggcgatgccctttaagcctgtgcctcccgttttgtct
cagtgggtgcccgaccatgggagccgccccccgtcggttcagaactatttccaacccact
agtgatcctctaccccaggtttgtaatgcccctccccagtcccaaatatctccacacaca
cccttgccccacaacacccctccaacacacccccagcagcaacaccaaccccaaccacca
cctcagcacccagacaggccaactagctcccagtggcctgacctggcaggtgcgaacaca
ccccagcaacacaacgcccattttcaggctcagacctacttcagccagagctcagacacc
ctggactcctggttcaaccagcatccccaggacctggtctaccaccagatgggagctggc
cctggcctggctcggcccgactcagccagaactcactatcggcacgactcggccgggtct
caccatggatcccactatggatcttaccatgcatcaacccctggcccagcgccggtcccc
ttcatcccagacggcaccatctccatgtttttcaaaggaaacgacgtggagaacgaggag
accctcgccggagagggagccagagcagtgaatgggctccaggacttccagccctcccat
aatcaccagcagatgtcatcccctcaaccccaagccaacccggtggtgggtgcagaggcc
acccacagttaccgtgggccacccccacaagctggccaatcattaacctacatgaacgat
ggtaactttcctggagctggcaaacccatccaacagaaacctgctgaggcccagtttgac
catgtggagaacctggagtgtgtgcccaaccaggaggtcctacccagcgagccccagagc
aaccctgctgtagcagccgcccacgggggagattgctacgaggcaggccccaatctggag
acccccgactctgtcccccgacccatacgttctgctagcgtgtcctctagctacagcaac
ttgagccacggcagtggcactggtacagttccacgccggcaccaaggagtggtgggcacc
ttcatccagcaggagagccctcggccctcagaggacgcattctcctcagctgctgccgga
ggctactttgagcagattgacacctctccggccggggatatggctgttgcttaccagagc
atcccggagagaatgtgccacagccaaccccctacgcccagtcctcccaaacccaccggc
attttccaggctagtgccaactcctcctttgagcctgtgcgctcacacagtgtcgcagtg
cgcccagcggaggtggaccgtgcccggatggtggcagagaggggctctgactctctgcct
gggaacctggagcagcctccagacaaccttgagaatatctacggagcagctacagggcac
actcaagctggggatggagctggggcacctcctcttgcataccctctgagtcactcccac
tccaggccctcgtcccgggctcatgtggcccaccggccctgtgagagccctgccaccacc
ctgtgggcccaacatgaccccgctagcctgggaaccaacatcctgctggtccctgctgcc
cctccggtccttgccccactgcgagagcccagtgccgaggtcatccagccccccgaggat
ggctccttggaccttcagccccctcaacacgcccctccgccctcccagcacccctctgag
aacctggagaaccctcctaaggtgagtgagggggacacgtctgactcgcagcccaatctg
ggctatgcctctctcctggtgtctgaatcgctccaccagcccgtgttgattgccccaccc
acctccaattacagcgtgattcctcccagtaaccctgcactcgcagccaatcaggtcagc
cccagggaggccacagtacctgtgaggccaccctcgcaggctcaaggggccagtgccgca
cagcccggtcctcccttgcgctccaatcagaacccattatttgcccctacaccaatgagc
ttcagcgtcgcctctagtcagagccctctcaatcttgttcgggatgacagggaaggggtt
aaaccagagatcacacccccaccatcccagtcccagcctgctcgctcccctctctcaaag
gtccaatcaacgtgcagaaacaaccattcttctctacctgttaatttgcaggctcctctt
cctgctgctcctggtgccgccaattataatcagctctcaaattacgagctgcttgatttt
tctatgcaccaatctcagatcccaaaccaagccgcagggctgccacctctctccctccag
cagggcccgcccctcgcgagtaacgctcctgggttttacctgcaggtcaccaaagatgct
cagcaggtgagtagaggcaatggggacgcctccacagcacagatgcctgccgatcccatg
ccccccccagtggccccaaacacccaacaaccaccctctgagccacccatggtgccacag
cctgggcaccaaggccaaggagatgaccctgcagcccctctcagtggagcaccaccaccg
caagggcagtacccaactccaatgcagggtcctgccacagggaatgcacccaccccctct
gcggcttaccctggacctcggggacatgtgcctctagccaatccccatccaccaggaacc
ggggttccttcagcccagccagcccctacagacccaccgcgacctccctcgtctctggga
agccagctggggtacggcccacctcccccagggcaggtgtatgggggatactacggaggt
gcctacccggagtacccagatggcagaggatcatatcttcctgctcagtacccacccgca
cctgtggaccccagagcacagcagtattatcaggatgacccatacatgatagcggaccct
cgctatggcagatatgaaggagccaacccggcctaccccccatacagagagccccagcca
gagagacccagctccagaaccagccagtactcagacagaccctcctccaggcaaggtttc
ccccccgaagaatatcagagagctaaccgaagtgcttatgatgactactatgcagagtat
tacaaaaaccagtacggagaccggagcaggtgggagggctacaatgcttcagcaggcact
tatgacccccgctacagagactactacgaccagaactattggtacaactacaaccctgag
gcctaccggggcagggaggcagcctactacaaccagcatccctcccagcagtaccctgcc
gctaccaccaggccacaaggctatgacgacaagtggcgctactatcctggttacgatgcc
agttttgacgatgactaccggcggcagagggaccagtacaaggacgattttgaccgacgg
agcgtccacagcgaacagtcggcccacagtctacacagctcccaaagccatcgcagccga
cgcagcagctttagctcccgctcacaacagagcgaggtgtacaggtcccagcctgacctg
acagcagtttacgaccccactgtttctaccctgcctgtggactactcctatggacaatac
ccagaacagatggatcccggacagagcttcagccagtacccctacacctcgggctaccag
gcagacaacagcacctgggtcgtcgctgagcagcctcctcctcgtcccgttactccagag
aagtactcggtatcccaccgctgtgcccgcttcggcccaggtggtcagctgatccaggtc
ctgcccaacctcccctcggccggccagcctgctctagtggagatccacaacatggagacg
atgctgcaggacacaccagaccaatccgagctgcgctccttccccggaccgcttttgaag
gaggagactcacaaggtcgacgtgataaagttctcccagaacaaaggcctggagtgtgcc
cgcaacaacgacctcctggacaaggactcggctgccctcctctgggacttcatcgtgctg
ctgtgtaggcagaacgggaccgtggttgggactgacatagctgatctgttgctgaaggag
catcgctcagtgtggttgccgggcaagtcacctaacgaggccaacctgattgacttcaac
aacgagccactggcgcgggccgaggaggagcctgggacgggaccattgtccctcctatca
gacacctttatgactgtccccgagaacataggcaaggaaacggagcgcttcagggaactg
ctgctatttggtcgcaagaaggatgccctggaggcagccatgaagggagctctgtggggc
cacgccctgctgctggccagtaagatggacagccgcacacatgctcgcgtcatgaccagg
tttgcgaacagtctgcccatcaacgaccctctgcagacagtgtaccaactgatgtctggg
aggatgcccgcctcagccacttgctgtggggatgagaagtggggcgactggcgcccccat
ctggccatggtgctgtccaacctgacccacactttggacctggacacacgtaccatcacc
accatgggagacactctggcttccaaggggctaaccgatgcggcccacttctgttacctg
atggcccaggttggtttgggggtgttcaccaaaaagagcaccaagatggttctaatcggc
tcaaaccacagtctgtcgttcttccagtttgcgtctaacgaagcgatccagaggacggag
gcatatgagtatgcccagtctctaggttcccagccctgctccctgcccaacttccaggtg
ttcaagctgatctatgcgtgtcgcctggccgaggccgggctgtgtgctcaggccttccat
tactgtgaggttatctccaggagcgtgctcatgcagccgtcctaccactctcctgtgttc
accagtcagctgatgcagatgtctgagaagatgcgattcttcgatccacaactgaaggag
aaggcagatcaggagctcttcaacgagccagagtggctgattaatctgagacagctggat
ggacagatgaggactggagtgattgtatacaatgcagacagggctactcctcagcagtat
gactgcagcacccccaattctgagttagaccagaccagcccgcctgagccatatgcccac
cctctggacatggttggccacacctctgacaaccctctgatgacatcactcatgcccgga
ccacctcaacaaggtgtgcagctgatgcctccagctcccccaactatcctccaggacgga
atggactcccagccgccacaccccaacgagggggtccagttctacccagtaccccccagt
ctccctggaccacctggccagatccctttatcagggttccctccccaaggctctggcttt
gtacaaccttaccaaccccagcagccccaaccggacaaaaaggacatgtttcctggagcc
cagcaccagcagatggcgccaccacagcatcagcaacagatgatgcccccgcaaatgcag
cagccacaaaagatgccctctgacaattatcagccaacgggtccaccggaactacagcct
cctcccatgtccacctctccacagaggaacaccttcacgcctcagatggacttctatgac
caaatggctcacatgggcccaggaagaagatccaggactacttcacagtcctcaatgcaa
atgcagcctccaggtcgccgctcccgcaccatgtcggaatcttccacacactccggagga
cgagagaggagcaactcggcagccaagcagtcctctccgcctccaccctccatccctgag
caggccaagaaggactcacctaaaaagggaggggggggtgggggtggcggttggctcaac
tggctctataggaaggggaagaatgaagcccaccttccggatgacaaaaacaaatctatt
gtctgggacgagaagaaacagaaatgggtgaacttggatgagccagaggaggagtacaag
ccccctcctcctcctccctcgggcttccctaaaatgctgggacccataccgggacaaggg
ggtcctggaggtccccctactggtgggccgcctgtcaacatgttctccaggagagcaggt
acaaagagccgctacgtggatgtcctgaacccaggtggaccccgtgccaagcccggtgga
tcggcacctgccccgtcagacttctttgccccgttggctcccatgcccatgccagccaac
ctgtttgtgcctggggcagaggaacagcagcccatggtgggtaatgtcccagagacagga
gggaaccaggaacagagcgaccctaaccccagtgctgtgccacagatgttcaacccaaca
ttgttaccgcccggtccagtggggccccctattgccgctgggtccccgtcaggagagctg
tcgcgttctagctcaatgagttctttatcacttgaattgagtccgcatataaaccaggtg
cccccgactccgcagcctcctccccagggagctccaccctctggaggcgtgacgttctat
aaccccgcccagtttgcacaggcgagtactccatcgggacggcttctgtctgggaggttg
ggcggtcagagggcatacccagtgctgaagtag
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integrated database retrieval system
