Oncorhynchus kisutch (coho salmon): 109903806
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Entry
109903806 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109903806
04121 Ubiquitin system [BR:
oki04121
]
109903806
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109903806
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109903806
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109903806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Zn_ribbon_19
zf-C3HC4_3
C1_2
HypA
DUF7560
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
109903806
NCBI-ProteinID:
XP_020356355
Ensembl:
ENSOKIG00005023525
LinkDB
All DBs
Position
LG14:47597428..47604317
Genome browser
AA seq
316 aa
AA seq
DB search
MAEAAAAQQHRFFCHCCKGEIDPKFPEFTCPRCESDFIEELSEDSSLLENSSTAEANDNA
GTLFSELWQLLFMECSSLLSDPSAYESDPIQLQAAPASDAVEDELEGPSVGTEPLEPELE
RPSRPPSQGRRQSRAPAVEGIVQQFLAGLFANNGNPGVAPAALSGMFHSNPGDYASGQGG
LDAVITELLGQFESTGPPPAEKEMISSLPTVNISQEQTGGFQPSRNTKPTASMGEEDTRL
ECPVCREEYSVGESVKQLPCLHYFHSDCIVPWLKLHDTCPVCRKSLDGVDQSIQPPPEPP
EPPSIRTDPQGERRAI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagctgcggcacaacaacaccgctttttctgtcactgctgtaaaggtgaa
atcgaccctaaattcccagaattcacttgccccaggtgtgagtccgatttcattgaggag
ttgtcagaagactccagtctcttggagaacagcagcactgcagaggccaatgataatgca
ggcacactcttttcagagctgtggcagctgctgtttatggaatgctcgtccctcctctcg
gacccctccgcctatgagtctgacccgatccaactacaggctgccccagccagtgatgca
gtggaggacgaactggagggcccttctgtgggcacagagcctttggagcctgaactggaa
cgcccctctcgcccgcctagccaggggagacgacagtcccgcgcgccagcagtggagggt
attgtgcagcagtttttggctggcctgtttgccaacaatggaaatccaggtgtcgcacca
gctgcactgtctggcatgttccattcaaatccaggggactatgcctcgggtcagggaggt
ctagacgcagttatcacagagttgttaggtcagtttgagagcacaggtccacctcctgca
gagaaggagatgatctcatccctccccacagtcaacatctctcaagaacagacaggtggg
ttccaaccaagccgcaacaccaaacccacagcatctatgggagaagaggacacaagactg
gagtgtccagtatgtagggaggagtactccgtgggagagtctgtcaaacagctgccctgc
ctccattatttccacagtgactgcatagtgccatggctcaaactgcacgatacctgtcct
gtgtgtcgtaaaagtcttgacggcgtcgaccagagcatccagcccccaccagaaccccca
gagcccccctccatcaggacagaccctcagggggagagacgggctatttga
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