Oncorhynchus kisutch (coho salmon): 109903831
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Entry
109903831 CDS
T09179
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109903831
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109903831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
109903831
NCBI-ProteinID:
XP_020356403
Ensembl:
ENSOKIG00005011810
LinkDB
All DBs
Position
LG14:complement(45404676..45501712)
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AA seq
775 aa
AA seq
DB search
MMFRDQVGVLGSWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELHVLEG
EANNPVVISQWQGEPKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIDHGRHLE
ESRQLLSYALIHPATSLDDRAALALWLNHLEERAAARGDSLERPPPAPASLHQTPPSTHS
LSGSSWSSSGCHLGQLYHHQRYGSDDRLNGWQGSRDSGLGSGWHQQQQGHGGCENGGHLA
LYPSSSVPGSINTVGTGGSILSGGGGGQHSPLKRSVSLTPPMSGCSLASSSSSSGGQALG
LGHGWISQEDLRGPRGGGGGGGGLGLAPTDPHHAPLSPQSSVASSGSGGSEHLEDGGGLH
RSSTFHEEGSCMRVFPLDYCPGVAQRPPKQHPGPLGTNRVGQGGLPQLYNDVPAWLKSLR
LHKYAVLFSTMTYDEMMSLTEQQLESQNVTKGARHKIVISIQKLKERQKMLRCLEKDVLE
GGNLRGPLAELHQMILTPIKAVASDESSPSSPSSTAHRPLLSPEGKSSTAPGGGEGETGT
TLIAEGDIPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLLHEAFTETQKKRLLSW
KQQVQKLIRSFPRKTLLDMAGYRAQRSSSSSRGFSQSNSLPTAGCVGGSSSVSAARRSLR
QFQMPSRSLPGARLGLLGPTPHSASSTPTGLKQGRQGLWFANPGGSNSMPSRTHSSVQRT
RSLPVHTTPHTMVMFQQSDLQVPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtgggtgtcctgggaagctggtttaagggatggaatgagtgt
gagcagacggtggctctgctgtcgctgctgaagcgggtgtcgcggacccaggcccgtttc
ctgcagctgtgtctggagcacagcctggccgaatgcaccgagctccacgtgttggagggg
gaggccaataacccagtggtgatcagccagtggcagggcgagcccaaggagcgcgtcatc
tccctggtcctcacccacctgcccctgctcaagccgggcaacgtcgaagccaagggcgag
tacatgcgcctcctcccccgcatcctggcgcacaccatcgaccatggccgccacctcgaa
gagtcacggcagctcctctcctacgccctcatccacccggccacctcgctggacgaccgc
gccgctctcgccctctggctcaaccatctggaggagcgcgccgctgcccggggtgactcg
ttggaacggccaccccccgccccggcctcactccatcagacgcccccctcgacacactcc
ttgtcggggtccagttggagttcctcagggtgccacctgggtcagctgtaccaccaccag
cgctacggctcggatgataggctcaacggctggcaggggtccagggactctggattgggc
agtggttggcaccaacagcagcaggggcatggagggtgtgagaatggcgggcacctggca
ctctacccgtcctcctcggtgcctgggagtatcaacacggttggcacgggcggcagcatc
ctgtccggcggtggcggcgggcagcacagtcccctgaagcgctcggtgtccctcaccccc
ccgatgagcggctgctccttggccagttcctcctcctcgtcgggcggccaagccctgggc
ctgggtcatggttggatctcccaggaggacctgcgcggtccccggggaggaggaggagga
ggaggagggctggggctggcccccaccgaccctcaccacgctcccctctcccctcagagc
agcgtagcgtcgtcgggcagcggcggcagtgagcacctggaggatggaggaggcttgcac
cgcagcagcacattccacgaggagggcagctgcatgagggtctttcccttagattattgt
ccaggcgtggcgcaaaggcccccaaagcaacatccaggccctctggggaccaacagagtt
gggcaggggggcctgccccagctttacaatgatgtgccagcctggctgaaaagcctccgt
ctccacaaatatgcggtgctcttctccaccatgacttatgacgagatgatgtcactgacc
gaacagcagctggaatcacagaatgtcaccaaaggggcacggcacaagatagtgatcagc
attcagaagctgaaggagcgtcagaaaatgctgcgttgcctagagaaggatgtgttggag
ggcggtaacctgcgtggccctctcgccgagctccaccagatgatcctgacgcccatcaag
gcggtggccagcgacgagtcgtcccccagctcgccctcctcgaccgcacacaggcccctg
ttgagcccagagggaaagagcagcaccgccccgggaggaggggagggggagacgggtacc
acactaatcgccgagggggacatccccggccagttcacccgcgtcatgggcaaagtttgc
acacagctcctggtgtccaggcccgacgaagagaacatcagttcctacctgcagctcatt
gacaagtgccttcttcacgaggcattcacagagacgcagaaaaagcgactgttgtcctgg
aaacaacaggtgcagaagctgatccgctccttccccaggaagaccctcttggacatggcc
ggctaccgggcacagaggagcagcagcagtagccgtggcttcagccagtccaattctctc
cccacggcgggctgcgtggggggcagcagcagcgtgtcggcggcccgtcgcagcctgcgc
cagttccagatgccctctcggagcctgcccggcgccaggctgggcctgctgggtcccacg
ccacatagcgccagcagcacccccactggcctcaagcagggacgacagggtctttggttc
gccaaccccgggggcagtaacagcatgccaagccgaacccacagctcagtgcagaggacc
cgctccctgcctgtccacaccacgccacacaccatggtcatgttccagcagtctgatctc
caggtgccggtgactgaaccagacatcaacaaccggctggagtctctgtgtctgagtatg
acggagcacgctctgggagatggagtcgaccgcacatccaccatctga
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