Oncorhynchus kisutch (coho salmon): 109903963
Help
Entry
109903963 CDS
T09179
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109903963
03015 mRNA surveillance pathway
109903963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109903963
03041 Spliceosome [BR:
oki03041
]
109903963
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109903963
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
109903963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
109903963
NCBI-ProteinID:
XP_020356588
Ensembl:
ENSOKIG00005044066
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMTKVNLEVVKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQDNIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDDEKKEKENRERESPRRRKSRSQSPRRRSPVKR
ERKRSHSRSPRRKPSPSSSPPPPAPAVTLVSVTLPQSTEEPQPEPDTSESTIPEPVIQEA
SSTSDVLKPDTVVVVPDSVTEVKEPSPDKAPKKERPKPREREKDSRRDRPHHRSRSHSRS
RRRPRSRSRSYSPRRRPSPRRRLSPRRRSPPRRGPPGPRHRRSRSPVRRRRSRSPSSSGS
SSTSHSPHKKAMKRPSTTPPRKQPRGHAADPSLSPSRRRAPNGSPSGKTQRSASPRARKG
RASASPSRSAGSKKKPGTRNDSPSPGPKPRQSEASESEGATADSVQQRRQYRRQNRETSS
EAGSSSSSEGEGSKRPGRGPVARNGDVRRRRSHSPSSPRRRHRDGSPRKRRSPSPGGRRS
PPRRRRSPSPPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPTPLGPQKRRLSGSPSPKRL
SPVPKRRPSRSPKRRSPPPQKRRTPPSSTSPPRHRRSPMLPSNRPGRDTRSPPLAHSNRL
SPSPANRGRTSPQGRFDTSPPGQRRQVSPSHGNRAIRRVSRTPEPRKNQRASQSPQPMRR
VSSRSLSGSPKPGALKRPASGSPSPGHSASGSPPAPPAKKASSGSGSPSPNKNSDTEPGG
KKNKKKKKEKKHKKEKKHKKHKKHKKEKCDVPVAAGDDQENQGMEGDAASNPKKESDSEV
EECLDDLEKHLREKALRSMRKAGKLSPPLS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggtttcttccgcggcacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaaacttctaaagcaactgaaatttgcagaatgtctggaaaagaaggtggatatg
accaaggtgaacctggaggtcgtcaaaccttggatcactcagcgagtgacagagatcctg
ggtttcgaggatgatgtcgtcatagaatttatatttaaccagctggaagaaaagcacccg
gacagtaagatgatgcagatcaacctgactggcttcctgaatgggaagaatgcccgagag
ttcatgagggacctgtggcctctgctgctcagcgctcaggacaacatcgccggtatcccc
tccgccttcctagagcagaagaaagaggagatcaaacagagacagattgagcaagagaag
cttgcttctctgaagaagattgatgatgagaagaaggaaaaggaaaaccgagaaagggag
agccccagaaggaggaagtcaaggtcacagtctccacggcgacgatctccagtgaagagg
gagaggaagcgcagtcactcccgctcaccgaggcgtaagccaagtcccagcagctcccct
ccaccaccagccccagctgtcacccttgtcagtgttaccctgccccagagcactgaggag
ccccagcctgagccagacacctcagagagcaccatacctgagccagtcattcaggaggcc
tcctccaccagtgatgtgttaaagccggacactgtggttgtggtacctgactctgtgact
gaggtcaaagaaccctccccagataaggctcctaaaaaggagaggcccaagcccagggaa
agggagaaggacagcaggagagacaggccccaccaccgctctcgctcccattcccgctcc
cgcagacgacccagatcacgctccaggtcttactccccccggcggaggccgagccccagg
agacggttgtcccctcgtcgtaggagcccccccagacgtggccctccaggccccagacac
aggcgcagtcgctcccctgtccgcagacggcgctctcgctccccatcatcctctgggagc
agctccacgtctcactcacctcataagaaggcaatgaagagaccgtcaaccacaccaccc
agaaaacagccccgcggccatgcagctgacccctccctcagcccctccaggagaagagcc
cccaatggcagcccctcagggaagactcaacgctctgcctccccgcgggccagaaagggc
cgggcctcagcctccccatccagatcagctgggtcaaagaagaaaccaggaacgaggaac
gattcaccgtcccctggtccgaaacccaggcagtctgaggcatcagagtcagagggggct
acagccgattctgtgcagcagcgacgtcagtatcgcaggcagaatcgggaaacgtcttca
gaggctggatcatcatcatcctcagaaggtgaggggtccaagaggccgggcagggggcca
gtggcgaggaacggggatgtcaggcggcggcgcagtcactctccctcctcccccaggaga
cgacaccgggacggctccccgagaaaaagacgctctccttcccccggaggacgcagatct
cccccaaggcgtcgcagatctccctctcctcctcctaggcgcaggtctccctctccacca
cctcgcagacgctccccctcccccagacggtactctccacccatccagcggcgatacagc
cccactcctttgggcccacagaaaagaaggctgtcagggtctccctctcccaaacgccta
tccccggtgcccaagcgccgtccctccaggtcccctaagcgcaggagtccccctccccaa
aagagacgcacacctccctcatccacctctccccccagacacaggagaagccccatgctc
ccatccaaccgaccaggccgggacactcgctcacccccccttgctcacagtaaccgcctg
tccccttcccctgccaaccgtggccggaccagtcctcaggggcgctttgacacctctcca
cctggacagaggcgccaggtgtccccctcacacggcaacagggcaatccgcagggtgtcc
cggacaccagagccccgcaagaaccagagagcctctcagagcccccagccgatgaggaga
gtgtcatcaaggtcactgtctggttcccctaaaccaggagccctgaaacggccagcttca
ggctccccttctccaggccactcagccagtggatccccacctgcacccccggctaaaaag
gccagcagcggctctggcagcccttctccaaacaagaattctgacactgagcctggagga
aagaaaaacaagaagaagaagaaggaaaagaaacacaagaaggagaagaagcataagaag
cacaagaaacacaagaaggagaagtgtgatgtgccggttgctgctggggatgaccaggag
aaccaggggatggagggcgacgcagcctccaacccaaaaaaggaatcagacagtgaagta
gaagagtgtctggacgacctggagaagcacctgagagagaaggcactgcgttccatgagg
aaagctggaaagctgtcccctccactgtcctga
DBGET
integrated database retrieval system
