Oncorhynchus kisutch (coho salmon): 109904056
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Entry
109904056 CDS
T09179
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109904056 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109904056 (mlh3)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109904056 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
109904056
NCBI-ProteinID:
XP_020356735
Ensembl:
ENSOKIG00005009504
LinkDB
All DBs
Position
LG14:27611307..27617297
Genome browser
AA seq
1267 aa
AA seq
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MIKCLSKEVQGKLRSGIAIFSLQQCVEELILNSIDASTTCVGVRVDIEAFKVQVIDNGSG
MDIEDMESVGNRYFTSKCSSLEDLDNLKFYGFRGEAVASIANLAMLVEISSRTKMSVKTH
VKVFKDGKGLDVFEAETTRPSAGTTVVICNFFHNMPVRRNRMDSVLEFERIRQRVEAISL
IHPSVSFTLKNDCTGTMVVQLSKARNTYYRFVQIHGLGRAQKLGEIKHSHAQFELSGYVG
REGHYNNTLQFLYVNDRLLLKTRIHKLLNLLLRKVGSSSRQNDNPGTPPATRSPKQRRGA
ELHAMYVINIMCHYSEYDICLEPAKTLIEFKDWESILFCIDEAVKAFLTRENLVSEISPE
DIQDYICKNVFSGQTASTDGVKDSIGKGVQTHMEGVTLECNVGKTLASELVHRRQIEDSD
KMKSVYQTCDGVESEQGDRVGKLRDKEVLTGFEQEQEYNTTNPQCRPSSVDTDQGLQYDS
ITDSSVTDSESYKEVTKENESNAHLKSAISCPESSQHSLIFKTMEENLKMSIEEGTEMKD
NAREHVSLSRCTVRAPCTLTQGIQSEMGSIKQTLPQPQDTELNPGGHRKIFLSHPYIHSS
LPSQKCLSHQSRKGLALESRETLATKRKWPMVEGPGHLHVYNRESKDLPTGIPSKISTFM
SCQKLALYKEVGSLDRFRRIYGKLTESNPVPVDVNSNYLAIDATASQTEHLVMNAKAVLP
YLELDQERDVTESRIDLMKDHKSPLTLSMFTKLKSLSARSSEISLATKLSHLKHQRTEVA
ASAFVHPPETTSNEDICPQDTVENNAILDINNGEQHNNTGRNRDFIPGCSTNPLPDEKEA
NNVTASCDWLHHYDDAVGKLVYINKVTGLSKYEAPSAEETQVSCTSDVTNMAISVISKKG
IEYRCYPFQMDLVLPFLPKSKSGSVLSSGPDNRDDIQDSNSLSSLYSEWTNPVFARPPMV
GVDISSVQAEGLAVKIHNILFPYRFSKDMIHSMKVIHQVDKKFLACLINTQDQEPAACSE
TDGNLLVLVDQHAAHERVRLENLVADSYEDDPETPGERRLCSSTVAPPLEVSVTEEELRL
LRSCRPSLRGLGLEMQFSQIGDPQVLVGKVPMCFTEKESNELRRGRRSIIKPIVEEYLQE
QIELLRSTGRVRGTLPLTVLKVLASLACHGECYFLIQWSYCTLYTFLISVMAQTGAIKFN
DRLSKEECCSLVGALSSCQLPFQCAHGRPSIAPLVDVLHLNDQEEPPRPNLRKLRRMYKA
WELYGNR
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttatcaaaagaagttcagggtaagcttcggtctggaatagcaatattt
tcattacagcagtgtgttgaagagcttattctgaacagtattgatgctagtacaacatgc
gtgggtgtgagggtggacatcgaagccttcaaagtgcaggttatagacaatggctcaggg
atggacatagaggatatggagtctgtcggaaacagatacttcacaagcaaatgcagttct
ttagaggacctagataatctcaaattctatggattcagaggagaagctgttgccagtatt
gctaatctcgccatgctggtggagatatcatccaggaccaaaatgtctgtgaagactcat
gtaaaagtcttcaaggatggtaaaggcttggacgtgtttgaggctgagactacccgccca
tctgcagggacgactgttgttatttgtaacttcttccacaacatgccagtgaggagaaac
aggatggatagcgtgctggagtttgaacggatcaggcagagagtggaggccatttcactc
attcacccctctgtctctttcacactgaagaatgactgcacagggaccatggtggtgcag
ctctccaaagcccgaaacacttactacaggtttgttcagatccatggtttaggtagggcc
caaaagcttggggaaatcaagcactcccatgcacagtttgaactaagcggttatgtagga
cgggaaggccactacaacaacaccttacagttcctctatgtgaatgacaggctacttctc
aaaacccgcatccacaagctgctgaaccttctcctacgcaaagtaggcagttcaagtcgg
cagaatgacaaccctggtacacctcctgccactaggagcccaaagcagagaagaggagcc
gagctacatgcaatgtatgtcatcaatatcatgtgccactactctgagtatgacatatgc
cttgagcccgccaagaccctgattgaattcaaagactgggaaagtattctgttctgcata
gacgaggcggtgaaagcattcctgacaagagagaacttggtgagtgaaatctccccagag
gatatccaggactacatttgtaagaatgtgtttagtggccaaacagctagcacagacgga
gttaaggactccattggcaaaggtgtccaaacacacatggagggtgttaccctggaatgt
aatgttggaaagacccttgcatctgaacttgttcatcgacggcagatagaagactctgac
aagatgaaaagtgtttatcagacatgtgatggagttgaatcagagcagggtgacagagta
ggaaaactaagggacaaggaggtccttacgggttttgaacaggaacaagagtataatacc
acaaacccacaatgtcgaccaagctcagtagatacagaccaaggtctacagtatgattca
attacagattcatcagttacggactcggagtcttacaaggaagttacgaaagagaatgaa
agcaatgcacatctgaaatctgctatttcttgtcctgaatcatctcagcatagtcttatc
tttaagacaatggaagaaaatctgaaaatgagtatagaagaaggaaccgagatgaaggat
aatgcaagagagcatgtatccctctcaagatgcactgtgagagcaccatgtactctcact
cagggaatccagtcagagatgggctctatcaaacagacactacctcaaccacaggacaca
gaactgaatccaggtggacacagaaaaatctttctatcacatccatacattcatagcagt
ttaccctctcagaaatgtctctcccaccagagtagaaaagggctagcgttagaatctaga
gagacacttgcaacaaaacgaaaatggcctatggtggagggcccaggccatcttcacgtt
tacaacagagaaagtaaggaccttcccactggcatcccttcaaagatttctacattcatg
tcatgtcaaaagctggctttatataaagaggttggatctctggacaggttcagaagaata
tacgggaagcttaccgaatccaatccagttcctgtcgacgttaatagcaattatttagca
attgatgccacagcttctcagaccgaacacttggttatgaatgccaaggctgttttgccc
tatcttgaattggatcaagaaagggatgtcacagagtcacgtatagatctgatgaaagac
cacaaaagcccgttaacactctccatgttcaccaaactcaaatctctctcagctcggagc
agtgaaatatctttggctaccaaactctctcatttaaaacaccaaaggacagaggttgca
gccagtgcatttgtacatcctccagagaccacttcaaatgaggatatatgtccccaggac
actgtagaaaacaatgctattctagacatcaataatggagaacaacacaataacactggc
cggaatcgtgacttcatcccgggctgcagtacaaatcctctgccagatgaaaaggaagcg
aacaatgtcacagcatcatgtgattggctgcatcactatgacgacgctgtggggaagctg
gtctacatcaacaaagtgacaggactcagtaaatatgaagcaccctctgctgaagagaca
caagtatcttgcacgtcagatgtcaccaacatggcaatcagtgtcatctccaaaaaaggg
attgagtacaggtgttacccatttcaaatggatctagtcttgcccttccttcccaaatcc
aaatcagggagtgttcttagttcaggtcctgacaatagagatgacattcaggactctaat
tcgctgtcgtccctgtactctgagtggactaaccctgtgtttgcacgacctcctatggtt
ggtgtggacatatcaagtgtgcaagctgaaggactggctgtgaagatccataacatcctc
tttccataccgcttctccaaggacatgattcactcaatgaaggttattcatcaagtggat
aagaagtttcttgcatgtcttatcaacacacaagaccaagagcctgcggcctgcagcgaa
actgatgggaaccttttagtgttagtggatcaacacgctgcgcatgagagagttcgtctt
gagaatctagttgcagattcgtacgaggatgatccagagaccccgggggagagacggcta
tgctcatccactgtagccccaccactggaggtcagcgtgacagaggaggagctgaggctg
ctcaggtcctgccggccatccttgaggggtctgggtctggagatgcagttctcgcagata
ggagatccccaggtcctggtggggaaggtgccaatgtgtttcacagagaaggagagcaat
gaactccgccgggggagacgttctatcatcaagcccatagtggaggagtaccttcaagag
cagattgagttactgcgttcaaccggcagagtgcgagggacattgcctcttacggtactt
aaagtcctcgcctcccttgcatgtcatggtgagtgttattttctaattcagtggtcatac
tgtactttgtatacgtttctcattagtgtcatggcccaaacaggtgcaatcaaattcaat
gaccgcctgagtaaggaggagtgttgcagcctggtaggcgctctatcttcatgccagctg
cccttccagtgtgcccatggccgcccatccatcgccccgcttgtagacgtccttcacttg
aatgaccaagaggaaccacctagaccaaacctcagaaaactgagaagaatgtacaaagcc
tgggaactttatggaaatagataa
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