Oncorhynchus kisutch (coho salmon): 109904066
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Entry
109904066 CDS
T09179
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B
KO
K17906
autophagy-related protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04136
Autophagy - other
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109904066 (atg2b)
04136 Autophagy - other
109904066 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109904066 (atg2b)
03029 Mitochondrial biogenesis [BR:
oki03029
]
109904066 (atg2b)
Membrane trafficking [BR:
oki04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109904066 (atg2b)
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109904066 (atg2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
109904066
NCBI-ProteinID:
XP_020356756
Ensembl:
ENSOKIG00005009075
UniProt:
A0A8C7DG18
LinkDB
All DBs
Position
LG14:complement(27457085..27478823)
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AA seq
2080 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDKWSLNEIL
ESVDAPFEVIEGFIQTISLTVPWASLLQENCALEVKGLEMVFRPRPRMASGLEPMYWSSF
MTSSMQLAKECLSQRLTDDLGESFQPLEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPE
NSKTGIGLEMRINKIVYCDETGEESSSVNVHQPTTFAHKNLQLEGVTVFWDEFSEAARAG
FKSSPIPAETEAKLSPSWNPRIICEPHPQFTEPVSSATPFEPMQIGHLSGRIDLSLVLKQ
NQTMPGAKLDVDGQISTMIVLLSPRQVHLLLDMFGVFSGSGGPEWGKDKRNRPMQQEDEY
RLHMELNRCLKKDSMMAGEDPDLFESQTTRTVSSREDVFFSMADMDMSHSLSSLPPLGEP
PTVDLDLSLNSNYSPSPGESPSGNATNLWDDYLDVPRQREKQTQESPFLMRDSPLQHKLL
RQTSHPTKAHGDESRPELVFRLTLGSLAVCVLHIDPLPPPDAAPSPLAPMAADFFRVVCS
DQLPPAGFIQLRTAFDDACPYDHLRFVAQGMKVTYEHCQGSSLHSFSTDVSLGQMELLEC
LFPSEAQRGVSLRGVQYTELLTFDTPVTTEAPSATCLHLLYKLSERRGTQGGQVRLSTMP
RKADFQVELGAVRSELDISIVDRLNSLLQPQKLVTTEMMASHMYTSYNKHISLHKAFTEV
FLDDSRTPANTHVSIRVNAPVLSLVVRFPIPDLRSDQERGPWFKKSLQKEVLYLELEDLE
VKTEFTGGSSPEQTKMELTFRELVGKFQEQEDQPAARFLRVSHTMDGDMTTSDSGKFDWP
RVVLKVNPTTVHSILERVTAEEDEGAEGHSPEEEEEEEGGGAHSLKDVCDFGKPEPSPFS
SRRVMYENEEMVIPGDVAEMTEFQEKTMSNSRFILELCLPNVQLSLPNKAFYEKLHNRIN
NDLLLWEPNAPSPVETVENMPYGVGLSVASQLINAAHYTKDSFSPFRSTGPEEEDSGSEE
ETMHHYSPASEQCFRSRRKKKPKGQSKTSQSLFSVILTVNHGLVALQTSAKQEDKTILNN
RHGEFWLEVKNGVLFSVTQYEGYKDRHYICFHTSNICLYHQGLVEGDTPVSDIKLPCRTR
PHWLEPAIYPSETDRASPSEGIGLEDHSMLSVAVKISSQNMERNVKEFLVAVGVRGTTLQ
HRVVPPKLGWYDQIVDFLNVSDEPVLGYIPPASVTTLHLHLWSCSLDYRPLYLPLRSLLV
VETFSISSSVSLDHSSSTLRIILDEAALFLSDKSNAVSVNLMRDYVQVVDMGTLELRITA
VKPGVDGELTEPRFELRCSSDVIHIRTCSDSCAALMNLIQYVASYGDLVPPPGPEAKSTC
SKHRAKSEASSRPPSQAPPLPDAEQQMLQDLMSEAMEETDNQHSLALQHNGIHEEQNHDL
DQPRSDLFLFPDESGNLPQELSPTYPTLHSPLITPAPILVPETDDFCILETPGSRADDRD
EEPVVNKLIPDSIEIKDDHFGLPLDSSDSSRGALNFPVPELRYLIREISVIWHLYGGKDF
GSSTFTSSPARSWGCTPHSSPSQTPVRQGRGGGRAGGGRGRNPDVLMEIQLSKVRFQHEV
YPQVPVASGSAADQPVSRQVLIVQDLEIRDRLATSQMNKFLYLYSSKEMPRTAHSNMLTV
RALHMCPETGQAPQECCLRVSLMPLRLNIDQDALFFLKDFFASLAAEVEMFSPPDQEALC
VSMKKPSAPEVSCSFTKNGGGSQDPAPIISVPAQSRSSLSLNGLTLPSNSDSGESEVATA
SSFTDQPIFFREFRFTSEVPIRLDYHGKHVSMEQGTFAGIVIGLTQLNCSELKLRRLCYR
QGLLGVDKLFSYAINEWLNDIKKNQLPGLLGGVGPIHSLVQLVQGFRDLVWLPIEQYRKD
GRVVRGLQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPGSDEREMKRIKRFS
HYRFAHQPVDLREGVANAYSVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPA
VVKPLIMATEATSNVLGGMRNQIHPDARQEESQKWRQGEE
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccattttctgagtctataaagaagcgggcatgcagataccttttgcatcgg
tatttgggcaatttcctacaagagaaactgagtttagatcagcttagcttagacctctat
caaggcactggatccctggcacaagtgccgttggacaagtggtctttgaatgagattttg
gagtcagtggatgcccccttcgaggtaatagagggcttcatccagaccatctccctgacc
gtaccatgggcgtccctgctgcaggagaactgtgccctcgaggtcaagggactggagatg
gtgttcagacccagaccacgcatggcatcaggtttggaacccatgtactggtccagcttc
atgacaagcagcatgcagcttgccaaagagtgtctgagccagagactaacggatgacttg
ggggaaagctttcagccactagagggattggagaagtttgcagagaccatagaaacagtt
ctgagaagagtcaaggtgacttttttggacacggttctcagaatagaacatgttccagaa
aactccaaaacaggaatcggtcttgagatgcgaatcaacaagattgtttattgtgatgag
acgggcgaggagagctccagtgtgaatgtgcaccagcccaccacgtttgcacataaaaac
ctgcaactggagggtgtcaccgtcttctgggacgagttttcagaggcggccagagctggc
ttcaaatcctcacccatcccagcagagacagaggccaagttatcccccagctggaacccc
aggataatctgtgagccacacccccagttcacggagcctgtttcctctgcaacacccttt
gaacccatgcagattggtcaccttagtggcagaatcgatctgtcgcttgtcctgaaacag
aaccaaaccatgcctggagcaaagttggatgttgatggacagatcagtacaatgatcgtg
ctgctatctccacggcaagttcacctactcctggacatgtttggagttttttcaggctca
ggtgggccagaatgggggaaggacaagaggaaccgtcccatgcagcaggaggatgagtat
cggctccacatggagttaaaccgctgcctgaagaaggactcaatgatggccggggaagac
cctgaccttttcgagagccagaccaccagaactgtgtccagccgagaggatgtcttcttc
tccatggctgacatggacatgtctcacagcctgtcatccctccccccactgggggaaccg
cccactgtggacctggacctgtcactcaacagtaactactccccctctccaggagagtct
ccctctggcaatgccacgaacctctgggacgattaccttgatgtgcctagacagagggag
aagcagacccaagaaagccctttcctgatgcgggactcaccactccaacacaagctgctg
agacagacctcccacccaaccaaagcccatggtgatgagtccaggccggagctggtcttc
aggctgacactggggagcctggctgtgtgtgttctccacatcgaccccttgcccccacca
gatgctgcccccagccccctggcccccatggctgctgacttcttcagggttgtctgctcc
gaccagctccccccagcagggttcatccagttacgcacagcgtttgacgatgcctgcccc
tatgaccacctcaggtttgtggctcaggggatgaaggtgacatatgagcattgtcagggc
tctagcctgcacagcttcagcacagacgtgtccctgggccagatggagctgctggagtgt
ctcttcccctctgaggcccaaaggggtgtgtccctaagaggggtccagtacacagagctc
ctgacatttgatacccctgtcaccactgaggcaccatctgccacctgcctccacctgctc
tataaactgtctgaacgcagagggacgcagggtggacaggtacgtctgagcaccatgccc
aggaaggctgacttccaggtggagctgggggcggtccgctctgagctggacatcagcatc
gtggaccgcctcaactctctgctacagccacagaaactagtcaccacagagatgatggcc
tctcacatgtacacatcctataataaacacatcagcttgcacaaggcctttacagaggtc
ttccttgatgacagccgtactccagccaacactcacgtgtcgataagagtcaatgctcct
gtgttgagcctggtggtgcgcttccccatcccagacttgcgttcggaccaggagagaggc
ccctggtttaagaagtccctgcagaaggaggttctgtacctggagctggaggacctggag
gtgaagacagagttcacaggcggcagctccccagagcagaccaagatggagctcaccttc
agagagctagtcgggaagttccaggaacaggaggaccagcctgcagccaggttcctcagg
gtctcccacaccatggatggagacatgaccacctctgacagtgggaagtttgactggccc
agagtggtgctgaaagtcaaccccaccactgtccactccatcctggagcgtgtgactgcg
gaggaggacgagggggctgaaggccactcccctgaggaggaagaggaggaggagggggga
ggtgctcactcactgaaggatgtctgtgattttgggaagcctgaaccctcccccttctcc
tcacgccgggtcatgtatgagaatgaggagatggtcattcctggggatgtggctgaaatg
acagagttccaggagaaaaccatgagcaattcccgctttatcctagagttgtgcttgcca
aatgtgcaattatcattacccaacaaagccttttatgagaaactgcataacaggataaac
aatgacctgctgttatgggagcccaacgctccctcgcctgtggagacagtggagaacatg
ccgtatggagtagggctgtctgtagccagccagctgatcaatgctgcacactacaccaag
gacagcttcagcccgttccgctccactggccctgaggaggaggacagtggatcggaggag
gagaccatgcaccactactcccctgcctctgagcagtgcttcagatctcgcaggaagaag
aagcccaaaggccagagcaagacctcccagagcctgttctctgtaatcctcaccgtcaac
cacggcctggtggctctgcagaccagcgctaagcaggaggataagactatattgaataac
cgacatggagagttctggttggaggtgaagaatggggtcctgttcagtgtgacacagtac
gaaggctacaaagacaggcactacatctgcttccacaccagcaacatctgtctctatcac
caaggtctggtggaaggagacaccccagtgtccgacatcaagctgccctgcaggacgcgt
cctcattggctggagccggccatctacccctctgagactgatagggcgtccccttctgag
ggcatcggcctggaggaccacagtatgctgtctgtcgccgtcaagatctcctcccagaac
atggaacgcaatgtcaaggagttcctggttgcagtgggagtgagagggaccacactccag
caccgagtggttccccccaaactgggctggtatgaccagattgtggacttcctgaatgtg
tctgatgagcctgtgttgggttacatcccacctgcctcagtcaccacccttcatctgcac
ctgtggagctgctcattggactacagacccctgtaccttccactcaggtctctgttggtt
gtggagacattcagcatctccagcagtgtctccttagaccactcatcctccactctcagg
atcattttggatgaagcagcgttgttcctctctgacaagagcaatgccgtctctgtaaat
ctaatgcgagactatgtgcaggtggtagacatgggaacattagagctgaggatcactgct
gtcaaacctggagtggatggagaattgactgagcccagatttgagctgcgctgctccagt
gatgtcatccacatcagaacgtgttcagactcctgtgctgctctgatgaacctcatccag
tatgtggccagctatggagacctagtgccccctcctgggccagaggccaaaagcacctgt
tccaagcatagagccaagtcggaggcttcaagccggcccccttcccaggcccctccgctc
cccgacgctgagcagcagatgctgcaggacctgatgagtgaggccatggaagagacagac
aaccagcacagcctggccttgcaacacaacggaattcatgaggagcagaatcatgacctc
gaccagcctcgctctgacctcttccttttcccggacgagagcggaaatctgccacaggag
ctgagtcccacttaccctacgctccactcacccctcatcacccctgcccctatcctggtc
ccagagaccgacgacttctgtattctagagaccccgggctccagagcagacgatcgggac
gaggagcccgtggtgaacaagttaatcccagactccattgagatcaaagacgaccacttt
ggcctgcccctggacagcagcgactccagcaggggagccctgaacttccctgtcccagag
ctgcgctacctcatcagggagatctctgtcatctggcacctgtacggggggaaggacttt
gggagctccacattcacctcctctccagctagaagttgggggtgtaccccacacagctcc
ccctcccagaccccagtcagacagggcaggggtggaggacgggccgggggggggcggggc
aggaaccctgacgtcctgatggagatccagctcagcaaggtgcggttccaacatgaggta
tacccccaggtcccggtggcctctgggtcggcggcggaccagcctgtgtcccggcaggtg
ctcatcgtccaggacctggagatcagagacagactggccacctcccagatgaacaagttc
ctgtacctctactccagcaaggagatgccccgcacggcccactccaacatgctgacagtt
cgggctctgcacatgtgtccagagacgggtcaagcaccccaggagtgctgtctgagagtc
tcactcatgccccttcgcctcaacatcgatcaggatgcattgtttttcttgaaagacttc
tttgctagccttgctgctgaagttgagatgttctctccacctgatcaagaagcactgtgt
gtttcaatgaagaagccgtctgccccagaggtctcgtgcagcttcactaagaatggaggt
gggagccaggaccctgcccccatcatctctgtgcctgcacagagccgctccagcctcagt
ctcaacggcctcaccctgcccagtaacagcgactctggggaatctgaggttgccactgca
tcatccttcactgaccagcccatcttcttcagagagtttcggtttacttctgaagttccc
attcgtctggattaccatgggaaacatgtttcaatggagcagggaacgtttgctggtatt
gtgattgggttgacacagctgaattgctccgagttgaaactaaggcggttatgctacaga
caaggactgttgggagtggataagctcttttcctatgcaataaatgagtggctgaacgac
atcaagaagaaccagctgccaggactgttgggtggagtgggacctatccactcgctggta
cagttggtccagggatttagggatctggtgtggctcccgatagagcagtaccggaaggat
ggtcgggttgtacggggattgcagcggggtactgcttcctttggcacttccacagctatg
gctgctctggagcttaccaaccgcatggtgcggactatccaggcagcagcagagactgcc
tatgacatggtatctccaggatccgatgagagggaaatgaagagaataaaacggttctct
cattaccgatttgctcatcagccagttgacctaagagaaggagtagccaacgcttacagt
gttgtaaaagagggaatcacggacactgctctgaccatctatgacacggccacacgggag
catgagcagcgtgggatgaccggggcagtgggtggggtccttagacagctccccccagct
gtggtcaagcctctcatcatggccaccgaggccacctccaacgtactggggggcatgagg
aaccagatccacccagatgcacgccaggaggaatcccagaaatggcggcaaggggaggag
tga
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integrated database retrieval system
