Oncorhynchus kisutch (coho salmon): 109904118
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Entry
109904118 CDS
T09179
Name
(RefSeq) estrogen receptor beta
KO
K08551
estrogen receptor beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
109904118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109904118
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109904118
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
109904118
Nuclear receptors [BR:
oki03310
]
3. Estrogen like
3A. Estrogen receptor
109904118
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
109904118
NCBI-ProteinID:
XP_020356852
Ensembl:
ENSOKIG00005017780
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Position
LG14:24979468..25003621
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AA seq
554 aa
AA seq
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MACFPGSGTDNSPLLQVQKVGSNKAPGLLPTIYSPLSGMESSSLCIPSSHTGSSHDYSPV
AFYNHSTLGYSRPTISDSPSLCPPLSPHLFWPPNDHGQHNMPPLTQHCPHPLLYSNPNYP
APFEEPKPHNLNLTPSSSLLHPTKLPGKKFCAVCNDYALGYHYSVQSCEGCKAFFKRNIQ
GHKDYVCPGTNQCTIDKNLRKMCRSCRLRKCYEVGMKKCGMSPEHYSYMGARHRRVPQGW
GAPGGLVGVGARAQWNLEGGSLPLLEVHHSSLTPEQLISCIMDAEPPEVYLMEDLKRPFT
EASMMMSLTKLANKELFLMISWAKKIPGFVELSLTYQMHLLESCWLDVLMLGLMWRSVDH
PGKLIFSADLKLNREEGNCVEGIMITFDMLLAATTRFRELNLQREEYVCLKVMILLNSNI
CSTSPEMAGNLESKGKLQLLLDSVTDALVWAISKQGLSFQLQSTRLSHLLMLLSDICHVS
GKGINHLSSMKNKNIVQVSDLLLEMLTNTCNRSRMSAPLDPYNHDLTMLPAAQAPAPTQA
SASAVDPQFQPHSL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcctgttttcctgggagtgggactgacaattctcccctgctccaggtccagaaggtg
ggctccaacaaggcccctggactcctgccaaccatttacagccccctcagtggcatggag
agctccagcctctgcatcccctcttcccacacaggcagcagccatgattacagccctgta
gccttctacaaccactctacgctgggctacagcagaccaaccatctccgacagcccctct
ctgtgtcccccactcagtccccacctcttctggccccccaatgaccacggccagcacaac
atgcccccgctgacccagcactgtccccaccccttgctgtacagcaatcccaactacccc
gccccctttgaagagcctaaaccccacaacctcaacctcacccctagcagctctctcctc
caccctaccaagctgccggggaaaaaattctgtgccgtatgtaatgactacgctttgggt
taccattacagcgtgcagtcttgtgagggctgcaaggccttcttcaagaggaacatccaa
gggcacaaggactacgtttgtccagggactaaccagtgcactatcgacaagaacctccgt
aaaatgtgccggtcctgccgcctacgcaagtgttatgaagtgggcatgaagaagtgtggg
atgagtccggagcactacagttacatgggggcgaggcacaggcgtgtgcctcaggggtgg
ggggcaccaggcgggctggtgggggtcggtgccagggcccagtggaatctggaggggggc
tccctccccctgctggaggtgcaccactcatccctgacccctgaacagctgatatcctgc
atcatggatgcggagccgccagaggtctacctgatggaggacctaaagaggcccttcact
gaagccagcatgatgatgtcactcaccaaactggccaacaaggagctgttcctcatgatc
agctgggccaaaaagatccctggctttgtagagctgagtctgacgtaccagatgcacctg
ttggagagttgctggttggacgtgctgatgcttggtctgatgtggaggtctgtcgaccac
cctgggaaactcatcttctcagcagacctaaagctcaacagggaagaggggaactgtgtg
gagggaatcatgattacatttgacatgctactggcagccaccactaggtttcgagagctg
aacctccagagagaggagtatgtctgtctgaaagtcatgatcctcctcaactccaacata
tgctctacctctccggagatggcagggaatctggagagcaaggggaagctgcagcttctg
ttggactcagtgacagatgccctggtgtgggccatctccaaacaaggcctgtccttccag
ctgcagtcaacccgcctttcccacctcctcatgttgctctcagacatctgccacgtcagt
ggcaaaggcataaaccacctctccagcatgaagaataaaaatattgtgcaggtctccgac
ctgctcttggaaatgctcaccaacacatgcaacagaagccgtatgtccgcacctcttgac
ccctataatcacgacctcaccatgctcccagcagcccaagcccctgcccctacccaggct
tcagcctctgctgtggacccccagttccagccacattccctatag
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