Oncorhynchus kisutch (coho salmon): 109904152
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Entry
109904152 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109904152
04082 Neuroactive ligand signaling
109904152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109904152
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109904152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
109904152
NCBI-ProteinID:
XP_020356920
Ensembl:
ENSOKIG00005013796
UniProt:
A0A8C7FUD8
LinkDB
All DBs
Position
LG14:23755185..23774879
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AA seq
457 aa
AA seq
DB search
MRERWDLSHYLAVFFSLMVLWQSRSIVESSAYASEAFKNNITLFTRILDRLLDGYDNRLR
PGLGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWIDERLKFNGPMNILRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSH
SCPLKFGSYAYTMAEVTYIWTRNASASVEVAPDGSRLNQYRLQGQTVGTETIKSSTGEYT
VMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNVKQKKEA
SAMKKNNAYAVAVANYAPNVTKDQSGLPTISKSTTSDPNKAKPEVKPEQNKKTFNSVSKI
DRMSRIMFPVLFGGFNLVYWATYLNREPVIKDMVPSK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcgatgggatttatcgcattatctagcggtgttcttctcgttgatggtactg
tggcagtcaagatcaatagtggaatcgtctgcatatgcttcagaggccttcaaaaacaac
atcactctgttcacccggatcttggaccgccttctggatggctatgacaaccgattacga
cctggacttggagatcgggtgacggaggtgaagacggatatttatgtcacaagtttcggt
ccagtgtcagacacagacatggagtacactgtggacgtgttcttccgtcagagctggatt
gacgagcggctgaagttcaacgggcccatgaacatcctgcggctgaacaatctgatggcc
agtaagatctggacgcccgacacctttttccacaacgggaagaaatctgtggctcacaac
atgaccatgcccaacaaactgctccggatcatggaggatggaacactgctgtacaccatg
aggttaacggtccaggcagaatgtcccatgcacctcgaagatttccccatggattcccac
tcctgtccactgaagtttggcagctatgcctacacaatggccgaggtgacgtacatttgg
acccgaaacgcatcagcgtcagtggaggtagcaccagatggatccagactgaaccagtat
cgccttcagggacaaactgtggggacagagaccattaaatcaagcactggtgaatacact
gtcatgacggcccacttccacctgaagaggaagattggctactttgtgatccagacctac
ctgccctgcatcatgaccgtcatcctctcccaggtctccttctggctcaaccgagagtct
gtacccgccagaactgtctttggtgtgaccactgtgctcactatgacgactctcagtatc
agtgcccgtaactctctgccgaaggtggcctacgccacggccatggattggttcattgcc
gtgtgctacgccttcgtgttctctgccctcatcgagtttgctaccgtcaactacttcacc
aaaagaggctgggcctgggatggcaaaagtgtggtgaacgtcaagcagaagaaggaggcg
tccgccatgaagaagaacaacgcctatgccgttgctgtggcaaactatgccccaaacgtc
accaaggaccaaagtggtctgcccaccatctccaagagcaccacctctgaccccaacaag
gccaagccagaggtcaagccagagcagaacaagaagaccttcaacagcgtcagcaaaatc
gaccgtatgtcccggattatgttccccgtgctcttcggtggtttcaacctggtctactgg
gccacctacctgaacagagaaccagtcataaaggacatggtcccgtccaaatga
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