Oncorhynchus kisutch (coho salmon): 109904210
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Entry
109904210 CDS
T09179
Name
(RefSeq) F-box only protein 33
KO
K10310
F-box protein 33
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109904210
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109904210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
GT-C_AftD
LRR_8
Motif
Other DBs
NCBI-GeneID:
109904210
NCBI-ProteinID:
XP_020357007
Ensembl:
ENSOKIG00005018251
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Position
LG14:complement(19806938..19814602)
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AA seq
527 aa
AA seq
DB search
MLFVFHTESSGTVPLSHNLTTVIFTLLFANNSLVACAMALCGGVGAMALPSELIVHIFSF
LSDRDKLRASSVCSRWRECLFYPSLWMELKLRVGGGSNGGGYGSEQTPRLDFLMRKFGSF
VRELQLEFAPVEGYLRPLNGVEGRMESVESDPQFPGRWKEAIITYLDQVLCVLGCIRNNR
NLQKLSLYGDTCILQDEGILDSAYLNQVDQGGVKIKEIQQLLVEVLSNSRQMKWLSSAFM
LGVVTPCSLASLSNPSAASLEHLSLLDNQLPCLSSPVELERLVHLRSLALDFCDFTSEMC
RLLAGGHRAPLHRLSLMVNGAALEAKPLDCTASEDDWKALVRRCANLRVYMMALDVSSQD
LLRVLKPSLPLERIHLDSYSTLVTDGTLELISQQYNKTLSHFVLMRDDTGFPDLSVNRNE
DPLVLLAWRCVHLSVLVIHGYTVWSHNLVAISRLRGSSLKVLAVSEESIDFDPDQGVFME
GDPVHNLVKEVSQGLGRIWHPSMDSNLVLSEPTQHFHREMQSFSLGM
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgttttccacacagagagtagcggaacagtaccgttgtcgcacaatcttaca
acggttatatttacacttttgtttgcgaataatagtttagtggcctgcgccatggctctg
tgcgggggtgttggagccatggctttaccaagcgagcttatcgtccacatattttcattc
ttgtccgaccgtgacaagcttcgggcctcgtccgtatgctctcgctggagggagtgtctg
ttttacccatcgctttggatggagctcaagttgcgtgtcggaggtggctcgaatggggga
ggctatggctccgaacagaccccaagattagactttctcatgaggaagtttggctccttc
gtgcgcgagctacagctcgagtttgccccagttgaaggatatctaaggccattgaatggc
gtggagggcaggatggaatctgtcgaaagcgaccctcagttccctggccgctggaaagag
gcaattatcacctatttggaccaggtgttgtgtgtcctcggatgtattcgaaacaacaga
aatctccagaagctgagtctgtatggggatacctgcattcttcaggatgagggcattctg
gacagtgcctatctcaaccaggttgaccaaggaggagtgaaaatcaaagagatccagcag
ctgttagtggaagttttgtctaacagcaggcagatgaagtggctgtcctcagccttcatg
ctgggtgtggtgaccccctgctccctggcctctctgtccaaccccagcgctgcctccctg
gagcacctcagcctgttggacaaccagctgccctgcctgtcctcccctgtggagctggag
cgccttgtccacctgcgttccctggccctcgacttctgtgacttcacctctgagatgtgc
cgcctgctggctggaggacaccgtgctccactacaccgcctctccttgatggtgaatggc
gccgctctggaggccaagccgctggattgcaccgccagtgaggatgactggaaggccctg
gtccgacgctgcgctaacctgcgggtctacatgatggccctggatgtgtccagccaggac
ctgctgagggtgctcaagcccagcctgcccctggagaggatccacctggacagctactcc
accctggtcacagacggcactctggagctcatttcccagcagtacaacaagaccctgagt
cacttcgtcctgatgagggatgacaccggcttccctgacctcagcgtcaaccgcaacgag
gacccgctggtcctactagcctggcgctgcgtacacctctctgtcctggttatccatggc
tacactgtgtggtcccacaacctggtggccatctcccgtctacgtggctccagcctcaag
gtcctggctgtgtccgaggagagtatcgacttcgacccggaccagggggtcttcatggag
ggtgaccccgtccacaacctggtgaaggaggtgtcccagggcctggggcgtatctggcac
ccctccatggactccaacttggtgctcagcgagcccacccagcacttccacagagagatg
cagagcttcagcctgggcatgtag
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