Oncorhynchus kisutch (coho salmon): 109904213
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Entry
109904213 CDS
T09179
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109904213
03015 mRNA surveillance pathway
109904213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109904213
03041 Spliceosome [BR:
oki03041
]
109904213
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109904213
Spliceosome [BR:
oki03041
]
Complex C
Other components
EJC/TREX
109904213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
109904213
NCBI-ProteinID:
XP_020357012
Ensembl:
ENSOKIG00005018092
UniProt:
A0A8C7GKA5
LinkDB
All DBs
Position
LG14:complement(19765410..19772138)
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AA seq
674 aa
AA seq
DB search
MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQARRPTIPGVGGRGRGINLL
RRGLSDIGGGPGGPPAKQRDIEVALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVV
ATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQKL
EVQAEQERKKVEGERRELFDERRAKQTELKLLEQKVELAHLQEEWNEHNTKIVKYIRTKT
KPPIFYLPGRMCSATQKLFDESQKKMNVMFEERCEAFAEYLNKMEARPRRQSLRDNALGK
DLKKEEQEEGKPTGQVVKATGNRFNVEMEDEATLEGDVGVKCKEDRKKKPGEKVREQAPK
KGENEENGQDIRIIEFREVEEQMEVTAVVREAEWQVGDQDKKMENSLVIGGAEVDNEKES
EQQQQVKVEKENKPLQNQDPTAVSDDQEKSFEMQPTEDEEPHTEVSIPLLSEPNPSLEVS
DGASIAPEVQIPLLEAGTEPLTTEQSQEADQGAMKQTVDVQPAQYDAAPKELEPLIEESS
RGRGKSKDKGDGGGSSSSSSSSSGSSSSGSSGSSSGSSSRSSSSSGSSSSSSSSRSRSRG
RKDRKHRRKPSERKKGGGDKSQKSSMASGRESKGSKEKGSKSDRKRTSSEGCRSGKMSSR
SDRDRKSDRKEKRR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtaggttctttgcaagcccagcttgagaaagctaaagagagtttgaaa
aatgtagacgataatatccgtaaattaactggccgggatcctaatgaattgagacctggc
caagctagaaggccaaccatcccaggtgttggaggtaggggacgaggaatcaacttgttg
agacgtggactctccgacattggtggaggacctggaggacccccagctaaacagagggac
attgaagtggcccttctgaggctggccggtgaccagcgagcgaggagagattcacgccat
gacagtgacgctgaggatgatgacgatgtcaagaagccagcgttgcagtcatcagtagta
gctacctccaaggagcgtacacgtcgagacctgattcaggatcagaccatggatgagagg
ggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacgttacagaaatttaag
caggaatctaatgtggcaacagataggcaaaagaaacgcattgagattgaacagaaattg
gaagttcaagctgaacaagaacgcaagaaagtagagggcgaaagacgagagctctttgat
gagaggcgtgccaagcagacagagctaaaactgttggaacagaaagtggagcttgctcac
ttgcaagaggagtggaatgagcacaatacaaaaattgtcaagtacatccgcacaaagacc
aagccacccatattctatctgcctgggaggatgtgctcagccactcagaagctctttgat
gagtcgcagaaaaaaatgaatgttatgtttgaggagagatgcgaggcgtttgccgagtat
ctgaataagatggaggctcggcctcgacgccagtctctgagggacaacgctctgggtaag
gacctgaagaaagaagaacaagaggagggtaagcccacgggtcaggtagtcaaagcgaca
ggtaatcggtttaatgtggagatggaggacgaggcaacactagagggggatgtgggtgta
aagtgtaaggaggacagaaagaaaaagccaggagagaaagtcagggagcaggcacctaag
aagggggagaatgaggaaaatggtcaagacattagaataatagagttcagagaggtggaa
gagcagatggaggttactgcagtggtgagggaggctgaatggcaggtcggggatcaggat
aagaagatggagaatagtttggtaataggtggggcagaggtagataatgagaaggaatca
gaacagcagcaacaggttaaggtagaaaaggaaaataagccgcttcagaatcaggacccc
acagctgtgtcagacgaccaggagaaaagctttgaaatgcaaccaactgaagatgaagag
ccacatacagaagtgtccatacccctgctctcagagcccaaccctagtctggaagtctct
gatggagcatctatagcccctgaggttcagatccccctgctggaggctggaacagagcct
ctcacaacagagcagagccaagaggctgatcaaggtgcaatgaagcagactgttgatgtc
cagcctgcccagtatgatgctgcccccaaggagctggagcctctgatcgaggaatcaagc
aggggacgtggaaagtcaaaggacaagggagatggtggtggcagcagtagctcctcaagt
agctcttctggctcctcatccagcgggagctccggctcctctagcggctcctccagcagg
agcagctcctccagcggcagctcctcttccagctcctctagtaggagccgcagccggggg
aggaaggacaggaagcacaggaggaagccgtccgagaggaagaagggaggtggtgacaag
agccagaagtcgtccatggccagtggtcgtgaatccaaaggttccaaagagaagggctct
aagtctgacaggaagaggaccagctctgagggctgccggtcagggaaaatgtcctctcgc
agtgaccgggatcgcaagtctgataggaaggaaaaaagacgttaa
DBGET
integrated database retrieval system