KEGG   Oncorhynchus kisutch (coho salmon): 109904213
Entry
109904213         CDS       T09179                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03013  Nucleocytoplasmic transport
oki03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109904213
   03015 mRNA surveillance pathway
    109904213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109904213
   03041 Spliceosome [BR:oki03041]
    109904213
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109904213
Spliceosome [BR:oki03041]
 Complex C
  Other components
   EJC/TREX
    109904213
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 109904213
NCBI-ProteinID: XP_020357012
Ensembl: ENSOKIG00005018092
UniProt: A0A8C7GKA5
LinkDB
Position
LG14:complement(19765410..19772138)
AA seq 674 aa
MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQARRPTIPGVGGRGRGINLL
RRGLSDIGGGPGGPPAKQRDIEVALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVV
ATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQKL
EVQAEQERKKVEGERRELFDERRAKQTELKLLEQKVELAHLQEEWNEHNTKIVKYIRTKT
KPPIFYLPGRMCSATQKLFDESQKKMNVMFEERCEAFAEYLNKMEARPRRQSLRDNALGK
DLKKEEQEEGKPTGQVVKATGNRFNVEMEDEATLEGDVGVKCKEDRKKKPGEKVREQAPK
KGENEENGQDIRIIEFREVEEQMEVTAVVREAEWQVGDQDKKMENSLVIGGAEVDNEKES
EQQQQVKVEKENKPLQNQDPTAVSDDQEKSFEMQPTEDEEPHTEVSIPLLSEPNPSLEVS
DGASIAPEVQIPLLEAGTEPLTTEQSQEADQGAMKQTVDVQPAQYDAAPKELEPLIEESS
RGRGKSKDKGDGGGSSSSSSSSSGSSSSGSSGSSSGSSSRSSSSSGSSSSSSSSRSRSRG
RKDRKHRRKPSERKKGGGDKSQKSSMASGRESKGSKEKGSKSDRKRTSSEGCRSGKMSSR
SDRDRKSDRKEKRR
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggcggtggcagtaggttctttgcaagcccagcttgagaaagctaaagagagtttgaaa
aatgtagacgataatatccgtaaattaactggccgggatcctaatgaattgagacctggc
caagctagaaggccaaccatcccaggtgttggaggtaggggacgaggaatcaacttgttg
agacgtggactctccgacattggtggaggacctggaggacccccagctaaacagagggac
attgaagtggcccttctgaggctggccggtgaccagcgagcgaggagagattcacgccat
gacagtgacgctgaggatgatgacgatgtcaagaagccagcgttgcagtcatcagtagta
gctacctccaaggagcgtacacgtcgagacctgattcaggatcagaccatggatgagagg
ggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacgttacagaaatttaag
caggaatctaatgtggcaacagataggcaaaagaaacgcattgagattgaacagaaattg
gaagttcaagctgaacaagaacgcaagaaagtagagggcgaaagacgagagctctttgat
gagaggcgtgccaagcagacagagctaaaactgttggaacagaaagtggagcttgctcac
ttgcaagaggagtggaatgagcacaatacaaaaattgtcaagtacatccgcacaaagacc
aagccacccatattctatctgcctgggaggatgtgctcagccactcagaagctctttgat
gagtcgcagaaaaaaatgaatgttatgtttgaggagagatgcgaggcgtttgccgagtat
ctgaataagatggaggctcggcctcgacgccagtctctgagggacaacgctctgggtaag
gacctgaagaaagaagaacaagaggagggtaagcccacgggtcaggtagtcaaagcgaca
ggtaatcggtttaatgtggagatggaggacgaggcaacactagagggggatgtgggtgta
aagtgtaaggaggacagaaagaaaaagccaggagagaaagtcagggagcaggcacctaag
aagggggagaatgaggaaaatggtcaagacattagaataatagagttcagagaggtggaa
gagcagatggaggttactgcagtggtgagggaggctgaatggcaggtcggggatcaggat
aagaagatggagaatagtttggtaataggtggggcagaggtagataatgagaaggaatca
gaacagcagcaacaggttaaggtagaaaaggaaaataagccgcttcagaatcaggacccc
acagctgtgtcagacgaccaggagaaaagctttgaaatgcaaccaactgaagatgaagag
ccacatacagaagtgtccatacccctgctctcagagcccaaccctagtctggaagtctct
gatggagcatctatagcccctgaggttcagatccccctgctggaggctggaacagagcct
ctcacaacagagcagagccaagaggctgatcaaggtgcaatgaagcagactgttgatgtc
cagcctgcccagtatgatgctgcccccaaggagctggagcctctgatcgaggaatcaagc
aggggacgtggaaagtcaaaggacaagggagatggtggtggcagcagtagctcctcaagt
agctcttctggctcctcatccagcgggagctccggctcctctagcggctcctccagcagg
agcagctcctccagcggcagctcctcttccagctcctctagtaggagccgcagccggggg
aggaaggacaggaagcacaggaggaagccgtccgagaggaagaagggaggtggtgacaag
agccagaagtcgtccatggccagtggtcgtgaatccaaaggttccaaagagaagggctct
aagtctgacaggaagaggaccagctctgagggctgccggtcagggaaaatgtcctctcgc
agtgaccgggatcgcaagtctgataggaaggaaaaaagacgttaa

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