Oncorhynchus kisutch (coho salmon): 109904277
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Entry
109904277 CDS
T09179
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109904277
Membrane trafficking [BR:
oki04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109904277
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_3
RA_2
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
109904277
NCBI-ProteinID:
XP_020357106
Ensembl:
ENSOKIG00005049411
UniProt:
A0A8C7LHU1
LinkDB
All DBs
Position
LG14:13195667..13230317
Genome browser
AA seq
1446 aa
AA seq
DB search
MMKTAVLSQETASTGVNAEPRSPPRPPLTPTVSSGSTVLFPPPRPALSSGPPLMAPPTLP
SKPSPPPDPTDPTPPVYLDSSPLLPSPLIPSSPSSPTPPLHSASEPFPSQIDLAVDATDA
TDVPNAAVPKECTPPLSRPLVLDVPDISTSTLVTSLPPQVLETSTPPLPTLLVPDVPETS
TPPLPTPLVPDVPETSTPPLPTPLVPDVPETSSPPLSTPVPPQVSKPSTPHLPDILDVSA
PPLPLHMSSSVPELSSSELTLPAPSSQPVPKPSSMLISSPTVTPISKPSSLPISSPHVPP
IAKPPLSTPPIPPLSKPSSLPISSPHVPPIAKHPLSTPPIPPLSKPSSLPISSPHVPPIA
KPPLSTPPIHPLSKPSVPPSPRVPPFSKISSPPLPRPPAPRKLSGPPQPRPPIPHPHSKA
KPSSPAFPRPPLPSMKSSSPPLPSPLVPLAPKPAPASTSTQATAPRPSISILEKLIKTCP
VWLQLGMAQERTTLLLKKEIPGIFLVRKSHDQKSMVLSVCVSDKQDELQVLDILIKEEKS
LMYLEGSVLVFDNIFKLMAFYCVSRDILPFTLRLPQVIVQATKYEDIEMISTLGSDFWGS
QLHSSSEMVKRDDQGQGHSSSSCEIQLSTGNSNDRLWYINPIFIEEYCSSLEASTLVPAP
IHRSQSLNTPGPGQVQVPPKFKRPPPRPPNVPEGLILSQSAKQGARGESVSPRSPPPPRT
VIAKAAGQKAEGDSSKDTEEEEGAASQLISEKEVSVTVTDSVAATQPLQPLSPHGATAGQ
KHPAPRPPPHRIPLVPLRRKPSENRPSIPGQEGGVGPVPVASLVCIDDTTNMAEEKLGVE
SHAGETETLQNKGTSGATNISEVVTVAIAPRTKRASHPVPPPRKKKPCQFTPTTPLSRNV
ISGGLLSINSSSDTPQNSSTPLPASRPTSIPVGEARGTDVSLYSPDGEAVFPALEHDSYS
TSSTEEEADTVASGAVGTGGTNNTKVLMKRTPTIMLDRAKHRLSSVFTNFMNTDHKLQKR
ILELFRDGSSYFGTLVKDYRVYILETMGKHSSSTELLQEIRQMMTQLKSYLIQSTELQNL
LEPNIYTEDKLEVIIEAALCKAMLKPLREAVYSGLKDIHARDGCLKRLRENQSVVLGTTT
TELGITTSVPETPVMEKIQLKLMTLHQEYSPQKKIDLLLKTCKIIYESMSIGCPSGRAYG
ADDFLPVLMYVLARSNMAFLLLDVEYMMELMDPALQLGEGSYYLTTTYGVLEHIKNYEKQ
VVTRQLSLEIQNSIHRWEKRRTLNKASVSRSCVQDFINVSFLEAGCNTKTLRVRPNTTAQ
DLCAQCADKFEVAEPESYSLSVLVEGHHQLLAPEEFPLPIKSSLHHSQPLKEYCFVYRPG
RTESEGQEAESQEAESQEAESQEAESQEAEGQEAEGQEAEGQKVESKEPAPTAEPEPEKE
ESLIEI
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaacagctgttctctctcaggagaccgcatctactggggtgaatgctgagcct
cgctccccacctagaccccccctcacccctaccgtatcttcaggatcaacagtactattc
ccccctcccagacctgccctctcctcaggaccacccctgatggctcctccgactctcccc
tccaaaccctccccaccccctgacccaactgacccaactccacctgtctacctggactcc
tcccccctcctcccttcaccccttataccctcctcaccctcctcacccacaccgcccctc
cattcagcttctgaaccattcccttctcaaattgacttggccgttgatgccactgacgca
actgatgtccccaatgccgctgtccctaaggaatgtactccccccttatccagaccccta
gtccttgatgtcccggatatctctacttccacccttgtcacatcactaccccctcaagtc
ttagagacctcaactcccccactccccacactcctggtacctgatgtcccagagacatct
actcccccactccccacacccctggtacctgatgtcccagagacatctactcccccactc
cccacacccctggtacctgatgtcccagagacatcttctcctcccctctccacaccagta
ccccctcaagtctcaaagccctctacaccccaccttcctgacatcctggatgtctctgct
cctcccctccccttacatatgtcctcttcagtcccagagctctcctcttcagaactaacc
ctaccagcaccttcatctcagccggtcccaaagccatcatctatgctcatctcttctccc
actgtaactcccatctcaaaaccctcctcacttcctatctcttctccacacgtacctcct
atagcaaaaccccctctgtccactccccccattcctcctctctcaaaaccctcctcactt
cctatctcttctccccacgtacctcctatagcaaaacaccctctgtccactccccccatt
cctcctctctcaaaaccctcctcacttcctatctcttctccccacgtacctcctatagca
aaaccccctctgtccactccccccattcatcctctctcaaaaccctccgtacctccgtct
ccccgtgttcctcctttctcaaagatctcctcaccccctcttcctagacccccagcacct
cgaaaactctctggtccaccccagccgagaccccccatacctcaccctcactcgaaagcc
aaaccctcctctccagctttccccagacccccacttccatccatgaagtcctcctctccc
cctctaccctccccactagtccctctagctcccaagcccgccccagcttcaacttcaacc
caagccacagccccacgacctagcatcagtatcctggagaaactgatcaaaacttgcccg
gtgtggttgcagctgggtatggcccaggagaggaccacactcttgctgaagaaagaaatc
cctgggatatttttagtgcgtaaaagccacgaccagaaatccatggtgctgtcagtatgt
gtatctgacaagcaggatgagcttcaggtcctggacattctgattaaggaggagaagtca
ctgatgtacctggaagggtctgttctggtctttgacaacatcttcaaactcatggccttc
tactgtgtcagccgggatattctacccttcaccctgaggttgcctcaggtcatcgtccag
gcaaccaagtacgaagatatagagatgatatcgacattaggctcagatttctggggttct
cagcttcacagctcctcagaaatggtcaaacgtgatgaccagggtcagggccacagcagt
tcgtcctgtgagatccagctgtccaccgggaatagtaatgaccgtctgtggtacatcaac
cccatcttcattgaggagtactgcagcagcctggaggcctccaccctcgtcccagctccc
atccacaggagccagagtctgaacaccccaggcccggggcaggtgcaggtaccccccaag
ttcaaacggcccccgcccaggcccccaaatgtcccagagggcttgattctgtcacagtcg
gctaagcagggtgccagaggggaaagtgtctcccccaggtctccacccccaccgcgaaca
gtaatagccaaggcagcaggtcagaaagcagaaggagacagcagcaaagacactgaggag
gaagaaggagctgcttctcaactcatctcggagaaagaggtgtcagttactgttactgac
tcagtagcagctactcagcctctacagccactgtcaccgcacggagcaacagcaggacag
aaacacccagcaccccgaccacccccacacaggataccactcgtaccccttcggcggaaa
ccctcagagaaccgtccctcaatcccgggacaggagggcggtgttggtccagtgcctgtt
gcttcactggtctgcatcgatgataccactaacatggcagaggagaagttaggagtggaa
tctcatgccggtgagacagagacactgcagaacaaagggacatcaggggctacaaacatt
agtgaggttgttaccgtggctatagccccgcggacgaagagggcctcacatccagtcccg
cctcccaggaagaagaaaccctgtcagttcacgcccaccacacctctctcccgaaacgtg
ataagcggaggacttctgtcaatcaattcatcatcggataccccccagaactccagcacc
cccttgcctgcctcgaggcccacctccatccccgtgggggaggccagggggacagatgtg
tccttgtactcccctgatggggaagctgtcttccctgccctggaacatgactcctactct
accagcagtacagaggaggaggctgacactgtggccagcggggctgtagggaccggtggg
accaacaacaccaaggtgttgatgaagaggacgcctaccatcatgctggaccgagccaag
caccgcctctccagcgtgttcactaacttcatgaacaccgaccacaagctccagaagaga
atcctagagctgttcagggacgggagctcctactttggcaccctggtgaaggactacagg
gtgtatatcctggagaccatggggaagcacagctccagcactgagctgctgcaggagatc
aggcagatgatgacccagctgaagagttacctcatccagagcactgagctacagaatcta
ctggagcccaacatctacacagaggacaaattggaggtgattattgaggctgccctgtgt
aaggctatgctgaagcctctgagggaagctgtgtattcaggcctgaaagacatccacgcc
agggacggctgtctgaagaggctgagggagaaccagagtgtcgtcctgggtaccaccacc
acagaactggggatcaccaccagtgtcccagagacccctgtcatggagaagatccagctg
aagttgatgaccctccaccaggaatactcccctcagaagaagattgatctgctccttaag
acctgcaagatcatctatgaatccatgtctataggctgtccatcagggagagcctatggt
gcagatgacttcctcccggtgctgatgtacgtcctggccaggagcaacatggccttcctg
ctactggatgtagagtatatgatggagctgatggaccctgcactgcagctaggagagggc
tcctactacctgacgactacgtatggagtgttggagcacataaagaactatgagaagcag
gtggtgacacggcagctcagtctggagatccagaactctatccaccgctgggagaagaga
cgcaccctgaacaaagccagcgtgtcacgttcatgtgttcaggacttcatcaacgtgtca
ttcctggaggcggggtgcaacactaagaccctgagggtccgccccaacaccacagcccag
gacctgtgtgcccagtgtgctgacaagtttgaggtggcagagccagagtcctacagcctg
agtgtgctggtggagggccaccaccaactcctggcccctgaggagttccccctccccatc
aagtccagtctccaccacagtcagcccctcaaggagtactgctttgtctaccggcctgga
aggacagagtcagaaggacaggaggcagaatcccaggaggcagaatcccaggaggcagaa
tcccaggaggcagaatcccaggaggcagaaggacaggaggcagaaggacaggaggcagaa
ggacagaaggtggagagcaaggagccagctcccacagccgagccagagcctgagaaggag
gagagtctgatcgagatatga
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