Oncorhynchus kisutch (coho salmon): 109904302
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Entry
109904302 CDS
T09179
Name
(RefSeq) tubby-related protein 4-like isoform X1
KO
K24720
tubby-related protein 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109904302
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Other domain-containing proteins
Tubby family proteins
109904302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Ribosomal_60s
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
109904302
NCBI-ProteinID:
XP_031643683
Ensembl:
ENSOKIG00005043960
LinkDB
All DBs
Position
LG14:11606480..11618413
Genome browser
AA seq
1950 aa
AA seq
DB search
MSRNCEPGHSVRMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQRRYYEEGWLAT
GNGRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGSQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMIAHVLLHESDGIVGMSWNCPCFLVEDST
ESDTDSDDNNPPQVRNLKPLLTVSFISGDISLMNNYDDLAPTVIRSGLKDVEVQWCSQGD
LLAVAGMERHGVPGLPSDSIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLF
LACGPALYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSLLCSYVTTAFIPTIKP
PIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRIS
KLRPEFIIMDPKTDSKAGGLGTGKDEVCVNAMISYMTDSCNCSDSSDIELSDEWVGKKSP
KLSRGNRSPKHSRRNMESRKSPKTSRTSQEGLRSPRLPTKKPLIRSPSLTRREMSMDGIS
EHNYLAQVTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRRISLD
FMSLPVFNPNVFSEDEDDLPVTGPSGVTGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQ
SLLANQNIQLDVLTNPTATASAAAAAAAAAAAAAASASVLGSDHGQDAVAVHYSGTLGRY
SNPGQVIFNGLEMGPLLAGTLPPPPPPHNLPQQTHQQRPQSQQTHQQQQSKQPQQIQTQQ
QQQQQRMQHQQLQHQQPQIPQHQQLQHQQPQIPQQHQQLQHQQPQIPQQHQQLQQLHIQQ
IQQQQQQQTQQHQALQQQYQQQQAALQQQQQQIQQQHQHLQQQQIAQQHQQMQLQHEQMH
QQQQQMQQQQQQIRQQIIEMRQQQQQLQQQHQQIQQQHQQMQRQHQQMQQQLKLQITLPP
PPTGYPTISLQQFQVPHPSPELGPERGQQGHTQSHTLGRPSLPRSRPPSFIDVDSIRSRP
PSFLEADTSRSRPPSFIDIDTIRTRPPSFIDVDTGTLRSRPPSFLDADSSRSRTLSFIDT
DTLRSRPPSFLDAETSLEIQMRKVNAPPPYPGTVVSAATATTSTAPQTLITNCDNPNILV
TADPCLKKDEFSLHPVGLQYQMGYERITTFDSSGNVEEVCRPRRRLIRNQNAYAVQGMGG
SATLKVTSSSDSKKIHLPYSSATLSRLSVPRYSIPSGDPPPYPDPANQVNINTTTLPPPQ
RMDSSHMIHATLRRDRRDGESRLKVSQMVDASRTLPSKSKINSAALALSYQQRVPTALYT
CTQCSSNSSSTSVSVSGGGSSSSGIAGGTVVRQDFPPGKGAHHSTIIVHSKSTSPLASQS
SYNLLSPIDNSRDRTVYVNSAFTEDEALSQQCRHLTIGEVSLTLKRPPPYQWDPNTAEEF
WIPQEQTILAPPPPPTHKPPPPLIFSNAQHLDMTRLPFLLSTKPPSSPSTVTFPSGYQIS
LSPFPPGGGQGGPPLQSMQSPPPPCPPNEVVASVPQFTQQDPNLVLPPGYPPNLANLACC
PLPPMYPGASSCAGLQLQPVSLHPWNPYSLPMQDPSGSATLPSKSHQLLEKPVLSPSPPT
VPPPPPPSLPPPPPPTMLPKPKSPTEELTESASSFQEPSSLNESPVPDRQGTDRFSKKSR
KRLDSRAEEANMTTVSEGKSKKEGRALSDFNSLISSPRLGGREKKKPKGQREQLNKTKKL
NRTSTTSEFQDSSESEPELFISGDELMNQSQSSKKGWKSKRSLRMASELEEIKCRKANER
EDRGLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRID
GNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactgtgagcctggtcactcagtaaggatgttagctgctgtggaacatggt
cccatcctctgcagcgactccaacatcctctgcctctcttggaagggccgggtccccaag
agcgagaaggacaagccggtgtgccagcggcgctactatgaggagggctggttggccaca
gggaatgggagaggggtggtgggcgtaacgttcacatccagccactgcaggagagacagg
aacacacctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtc
cgttggaatgagccctttcagaagctggccacgtgtgacatggagggaggcatctttgtt
tggattcaatatgagggacggtggtctgtggagttagtgaatgaccgcggtgcccaggtg
agtgacttcacatggtctcatgacggcagccaggccctgatcgcctaccgggatgggttt
gtcctggtgggctcggtcagcggacagagacactggtcctcagagattaacctggagagc
cagatcacctgtggcatctggacacctgatgaccaacaggtgttgtttggtacggctgat
ggtcaggtgatagtgatggactgccatggtcgtatgatcgcccacgtcctcctgcatgag
tcagatggcatcgtcggcatgtcctggaactgtccctgtttcctggtggaggacagcaca
gagagcgacaccgactctgatgacaataacccacctcaagtacgtaacctgaagcccctt
ctgacagtcagcttcatatcaggagacatcagtttgatgaacaactacgatgacctcgct
cctaccgtcatccgctcaggactcaaagatgtagaggtccagtggtgctcgcagggggac
ctcctggcagtagctgggatggagagacatggtgtccccggactcccctctgactctatc
atgaggaacgccctggtcaagttctacaatgtccaaggagaacatatctacacgttagaa
acacctgcccagcgccccatcaccaccatctgctggggccatagagactctcgtctgttt
ctggcatgtggcccggcgctgtatgtggtgcgagtggagcaccgggtggccagcctgcag
ctgctgtgccaacagggcatcgccagtgccctgcgggaggagagggacgtgggcaaactc
aacatgccttccttactctgctcctatgtcaccaccgccttcatacccaccatcaagcct
cccattcctgatcccaacaacatccgggactttgtcagctaccccactgctggcaacgag
aggttgcactgcaccatgaagcgagcggaggacaaccccgaggcagggggaccctgttac
accctatacctggaacacctaggggggctggtgcctatcctcaaaggcagacgcatcagc
aagctacgcccagagttcatcatcatggatcccaaaacagacagcaaagcaggtgggctt
ggcacaggaaaagacgaggtgtgtgtgaatgctatgatctcctacatgactgacagctgt
aactgttccgactccagcgacattgagttgagtgatgagtgggttggaaagaagtcgcct
aaactatccagaggaaacaggtctcccaagcattccagaagaaacatggaatcaagaaaa
tctcccaagacgtctaggactagtcaggaagggcttcgatcgccaaggttaccaacgaag
aagcctctgattcgttctcccagtctgacacgtcgagagatgtccatggatggaatctct
gagcataattacctggctcaagtcacgtccaatatttgggggactaagttcaaaattgtg
ggacttgcttctttcttacctgctaatctgggtgcagttatctataagaccagtttgctc
catctacaaccaaggcagatgacaatctaccttccagaggtgcggagaatatcacttgac
ttcatgagcctgccggtctttaacccaaacgtcttcagtgaggatgaggatgacttgcca
gtaacgggaccatctggagtgacaggtgacaaccctccatgtacggtcaacatccctatc
gcgcccatccacagccccgcccaggccatgtcccccactcagagcattggtttggtccag
tccctgctggccaatcagaacattcagctggatgtcctgaccaatcccacggctacggct
tcagcagcagcagcagcagcagcagcagcagcagcagcagcggcctcagcctctgttctg
gggtctgatcatggtcaggatgctgtggcagtacattacagtgggactctaggaaggtac
tccaacccaggacaggtgatatttaatgggctagagatgggtcccctcctggctggaaca
ttacctccacctccgcctccacataacctcccccaacaaactcaccaacaacgtcctcag
tcacaacagacgcaccaacaacagcagtccaaacaaccacagcagatacaaacgcaacag
cagcagcaacagcagaggatgcaacatcaacaactacagcaccaacaaccacagattcca
caacatcaacaactacagcaccaacaaccacagattccacaacaacatcaacaactacag
caccaacaaccacagattccacaacaacatcaacaactacaacagcttcacatacagcag
atccaacagcagcagcagcaacagactcagcagcaccaagcactgcaacaacagtaccaa
caacaacaggcggcactgcaacagcaacaacagcagatccaacagcagcaccaacacttg
caacagcagcaaatcgctcagcagcaccaacagatgcaactgcagcacgagcaaatgcat
cagcagcaacaacaaatgcagcaacaacaacagcagatccgacagcagattatagagatg
aggcagcaacagcagcagttacagcagcagcatcagcagatacaacagcaacaccaacag
atgcagagacaacaccaacaaatgcagcagcaactaaagctgcagatcaccttgccccct
ccgcctactggctaccccaccatctctttgcagcagtttcaggtaccccaccccagtcca
gagttgggaccagaaagaggacagcagggccatactcagagccatacgctgggcaggcca
agtctaccgcgatccaggcctccatcattcattgatgtagacagcatacggtctagacct
ccttccttccttgaagcagacacatcaagatctaggccgccgtcattcatcgacatagac
acaatacggactagacctccttctttcattgatgtagataccggtacattgcgatctaga
cccccgtctttcctcgatgcggactcctcccgatctagaactctttcattcatagacaca
gacacactacggtctagacctccttccttccttgatgcagagacttcccttgagatccag
atgaggaaggtgaacgctcccccgccctacccaggaaccgtagtgtctgcagccaccgcc
acaacctccaccgctcctcagaccctcatcaccaactgtgacaaccccaacatactggtc
acagcagacccttgtctgaagaaagacgagttctcactccacccagttggtctccagtac
cagatgggatacgagaggatcacaacctttgacagcagtgggaatgtagaggaggtgtgt
cgccctcgcagaagactcatacgcaaccagaacgcctacgctgttcaaggcatgggaggt
tctgccacacttaaagtcacctcatcgtctgacagtaagaaaatccatcttccttacagc
tcagcgactctaagccgcctctcggtgccacgatactccatacccagcggagacccgccc
ccctacccagatccagccaatcaggttaacattaacacgacaacacttcctcctccccaa
cgcatggacagtagtcacatgattcacgctaccttgcgacgtgacaggcgagatggggaa
tcccgcttgaaggtgtcccagatggttgatgcttcaaggactctaccgtccaagtcgaag
atcaacagtgctgccctagcgctctcttaccagcagagagtgccaacagctctgtatacc
tgcactcagtgcagcagcaacagcagcagcaccagtgtcagtgttagcgggggtggtagt
agcagcagtggcattgcaggaggcactgtagtgcgacaggatttcccaccaggaaaaggt
gctcatcacagcaccatcattgtccactccaaaagcacttcacctcttgcctctcagtca
tcgtacaatctgctgagtcctattgataacagcagggataggactgtatacgtgaactct
gcctttactgaagacgaggcattaagtcagcagtgtcgtcacctgactatcggggaggtt
agtttgactctgaaacgtcctccgccataccagtgggacccaaacaccgcagaggagttc
tggatacctcaagaacagactatcttagctccccctccaccaccaacacacaaaccccca
cccccactcatcttcagcaatgctcagcacctggacatgacgcggctgcctttcctactc
tcaacaaaaccccccagcagcccaagcactgttactttcccatcgggttaccagatctcc
ctgtcacctttccctccagggggaggtcagggtggacccccactccagtcaatgcagagc
cctccaccaccctgccctcccaacgaagtagttgcctcagttccccagttcacccagcag
gaccccaacttggtcttgccacctggataccctcccaaccttgccaacctggcttgctgc
cctctgccaccgatgtacccaggagctagctcctgtgccgggcttcagctgcaacctgtt
agcctgcacccctggaacccctacagcctacccatgcaggacccctcaggctctgccacc
ttgcccagcaagtctcatcaactgttagagaagccagtcctctccccatctcctcctacg
gttcctccccccccacctccttcacttcctcctcctcctccaccaaccatgctgccaaaa
cccaaaagccctacagaggagctgacggaatctgccagtagcttccaggagccgtcttct
ctaaatgaaagccctgttccagaccggcaggggactgacaggttcagcaagaagagccgt
aaacgtctggacagccgagctgaggaggcaaacatgaccaccgtctcagaaggaaaatcc
aaaaaggaagggcgtgccctctccgacttcaactccctcatctccagccccaggcttggt
ggcagggagaagaagaaacccaaaggccagagggagcagctgaacaaaaccaagaagctc
aacaggacaagtaccaccagcgagttccaggacagttccgagagtgagcccgagctcttc
atcagtggagacgaactgatgaaccagagccagagctccaagaagggctggaagagtaag
aggagcctgaggatggccagtgaactggaagagatcaagtgcaggaaggccaatgagaga
gaggaccgcgggctgggcagccagggattcgtctacgtcatggccaataagcagccactc
tggaacgaggcaacacaggtctaccagctggacttcggaggacgggtcactcaggagtct
gctaagaactttcagatcgagttggatggcagacaggtgatgcagtttggcagaatcgat
gggaacgcctatatcctggatttccagtatcctttctcagcagtgcaggcctttgctgtg
gccttagccaatgttactcaaaggcttaagtga
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integrated database retrieval system
