Oncorhynchus kisutch (coho salmon): 109904417
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Entry
109904417 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase U-like
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109904417
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109904417
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
109904417
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
109904417
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
Type II RPTP family
109904417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Pur_ac_phosph_N
Y_phosphatase3
PTPlike_phytase
Ig_DSCAM-DSCAML_C
SPG48
Motif
Other DBs
NCBI-GeneID:
109904417
NCBI-ProteinID:
XP_031644594
Ensembl:
ENSOKIG00005033279
LinkDB
All DBs
Position
LG14:complement(63790544..64059494)
Genome browser
AA seq
1467 aa
AA seq
DB search
MYTGVFLLMLVVGLYADTMDQGPTAGCTFDEDSDPGLCEYKQGQEDDFDWQLMRTYNWPH
STPDLLRGSFMMVNSSQHAVGQRAHLLLRSLSENDTHCIQFSYFLYSRDGHSPGDLQLYI
RVNGGPRGSAVWNVSGSHGRQWHQVELAVSTFWPSEYQVVFEASVSAERRGYIAIDDILL
LNYPCYKVPHFSRLGDVEVNAGQNATFQCVATGKTTETEPFLLERRNGVVVAASSIQRLS
HKRLMATFQVAAERGEQDLYRCVTESTRGAAVSNFAELIVRVPPTPIAPPQLLRAGPTYL
IIQLNTNSIVGDGPVIRREIEYRASQSPWSETHGVGSLTYKVWHLEPDTEYRISVLLTRP
GEGGTGAPGPPLVSRTKCAEPMRALRGLTATEIQPRQLTLQWEPLGYNLTRCHTYSVSLC
YRYSTPAGGSAGNNATVRECLSVERNQSHFTLRDLPPFRSVHVRLALDNPEGKKESREVT
FQTEEDIPGGVAPESLTFTPLDDMIFLKWEEPVEPNGVITQYEISYQGIESSDPGINVPG
PRRTVSKLRNETYHMFSGLHPGTTYLVSVRARTAKGFGQTALTEITTNISAPVFDYEDVP
APLSESESTITVLLRPALGRGAPVSAYQVVVVEEDGSRRVRRSRRRRRELGSGSDCFPVP
ASQVEAQSKSHYYTAELPPSSLPEATPFTVGDNHTYNGYWNTPLDPSKNYLVFFQAISNF
RGETRMNCIRIARKGACKDHKRTLEVSQHAEDMGLILGACAGGLVVLILLLGAIVIVVKK
GRDFYSYSYYPRKNVALNKAAMSYRQEKTRKLGSLDCSMTEQSTLQQDERTANSFMDAHA
CNTRNEQRSSVNESSSLLGGSPRRHCRRKSSPYHTGQLHPAVRVADLLQHINQMKTGEGY
GFKQEYESFFDGWDVTKKKDKTKGRHDSLLGHDRHRVKLHSLLADPNSDYVNANYIDIRI
NREGYQRSNHFIATQGPKQEMIYDFWRMVWQENCFSIVMITKLVEVGRMKCCKYWPEDSE
LYGDIKITLLKTETLAEYTVRTFAMERRGYPAKHEVCQFHFTSWPEHGVPYHATGLLAFL
RRVKASTPPDAGPVVVHCSMGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINM
IQTEEQYVFIHDAILEACLCGETAIPVIEFALTYKEMLRVDSQSNTSQLREEFQTLNSVT
PHLDVEECSVSLLPRNREKNRSMDVLPPDRALAFLVTTEGVAEGNSYINAALTDSFHRPA
AFVVTPHPLPGTTADFWRLVYDYGCTSVVMLNQINQSNSAWPCLQYWPEPGLQQFGPMTV
ELLSMMADDDVIIRLFRVQNIMRLQEGQLVVRHFQFLRWSPYRDVPDSKKAFLSLLAQVH
NWQRECGEGRTIVHCLNGGGRSGTFCACTMLLEMIRHHSVVDVFYAAKTLRNSKPNMVET
MEQYRFCYDLALEYLDALDCLSEIEVR
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgtataccggagtgtttctactgatgctggtcgtcgggctctacgctgatactatggac
caagggccaacagctggctgtacctttgacgaagactctgaccctggactgtgtgagtac
aagcagggacaggaggacgactttgactggcagctgatgaggacatacaactggccacac
agcaccccagacctgctacgagggtcgttcatgatggtgaactcgtcccagcatgcagtg
gggcagcgggcccaccttctcctccgttcgctgagtgagaacgacacgcactgcatccaa
ttcagctacttcctgtacagccgcgacggccattcccccggggacctgcagctctacatc
cgggtcaacggggggccgcggggaagcgccgtctggaacgtctccgggtcacatggacgc
cagtggcaccaggtggagctagccgtcagcacattctggcccagcgaataccaggtggtg
tttgaagcatccgtctcggcagaacggcgaggctacattgccattgatgacatcctgctt
ctcaactacccctgctacaaggttccccacttctctcggctgggggatgtggaggtcaat
gcagggcagaatgccaccttccagtgtgtcgccacaggcaaaactacagagacagaaccc
ttcctactggagcgtcgtaacggtgtggttgtggctgcgtcctctatccagcgtctgagc
cacaagcgtctgatggccaccttccaggtggcggctgagagaggggagcaggacctgtat
cgttgcgtcacagagtccacccgcggagctgctgtgtctaactttgccgagctcatcgtc
agagtgccccccacccccatcgctccaccccagctgctccgggctggccccacctacctg
atcatccaactcaacacaaactccatcgtgggggacggccccgtgatccgtcgcgagatc
gagtaccgcgccagccaatcaccatggtcggagacacatggcgtgggctcgctcacttat
aaggtgtggcatctggagccggacacagagtaccgtatcagtgttttactgacccggcca
ggggagggaggcacaggggcgcctggaccccccctggtcagcaggaccaagtgtgcagag
cccatgcgtgcgttgcgaggcctcacagcgacagagattcagcctcgtcaactaacctta
cagtgggaaccgctgggctacaacctgacgcgctgccatacctactctgtctctctctgc
taccgctactccacgcctgcagggggcagcgcagggaacaacgccacagtgagggagtgt
ctctctgtggagaggaaccaatcacacttcaccctgagggacctgcccccgttccgatcc
gtccacgtccgactggctctggacaacccagaaggcaagaaggagagcagagaggtcacc
tttcaaactgaggaggacattcctggtggcgttgccccagagtcactgaccttcactcca
ttggacgatatgatctttctgaaatgggaggagcctgtggagcccaatggggtaatcaca
cagtatgagatcagttatcagggcatcgagtcatctgacccaggtatcaacgtaccaggc
cctcgccgtaccgtttccaaactgaggaacgaaacataccacatgttctctggcctacac
cccggcaccacctacctggtgtctgttagagctcgcaccgccaagggcttcggacagacc
gccctcactgagatcaccaccaacatctccgccccagtgtttgactatgaggatgtccca
gccccactcagtgagtcagagagcaccatcacggtgctgttgagaccagcgctgggcaga
ggagcaccagtcagtgcgtaccaggtggtggttgtagaagaggacggttccaggcgggtc
aggaggagcaggaggaggaggagggagctgggtagcgggtcagactgtttccctgtgcca
gcgtcccaggtggaggctcagtctaagtcccactactacacggctgagcttcccccctcc
agtctccctgaggccactccgttcaccgtaggggacaaccacacctataacggctactgg
aacactcccctggacccctccaagaactacctggtcttcttccaggctataagcaacttc
agaggggagacgagaatgaactgcatccggattgcccgtaaaggtgcctgtaaggaccat
aagaggaccctggaggtgtcccaacatgcagaggacatgggtctgatcttgggggcctgt
gctgggggactggtggtccttattctgctgctgggggccatcgtcatcgtcgtcaagaag
ggaagggacttctattcttactcttactaccccaggaagaatgtagcgctgaacaaggca
gccatgtcgtaccgtcaggagaagaccaggaagctaggttctttggactgcagcatgaca
gagcagagcaccttgcagcaggacgagcgcaccgctaactccttcatggacgcccatgcc
tgcaacacacggaacgaacagaggagttcagtgaacgagtccagcagcctgttgggtggt
tcccctcgacgccactgtcgaaggaagagctctccgtaccacacgggtcaacttcacccc
gcggtcagggtggcagacctcctccaacacatcaaccagatgaagactggggagggatac
ggattcaaacaggagtatgagagcttctttgatggatgggatgtcaccaagaagaaggac
aagactaaagggagacatgacagtttgctggggcatgatcgtcatcgagtcaagctgcac
tccctcctagcagaccccaactctgactatgtcaatgccaactacatagacatccggata
aacagggaagggtaccagcgatcaaaccacttcatagccacccaaggtcccaagcaggag
atgatctacgacttctggaggatggtgtggcaggagaactgcttcagtattgtcatgatc
actaaactggtcgaagtgggcaggatgaagtgctgtaagtactggcccgaggacagtgaa
ctctatggagacatcaagatcacactgctgaaaacggaaacactggccgagtacaccgtc
cgcacctttgctatggagcggaggggctacccagccaaacatgaggtgtgtcagtttcac
ttcacctcctggccagagcatggtgttccctaccatgccacaggcctgctggccttccta
cgacgggtcaaggcttccacaccccccgacgctgggcctgtggttgtccactgcagtatg
ggagcaggcagaacaggctgctacatcgtgctggacgtcatgctggatatggcagagtgt
gagggagtggtggacatctacaactgtgtcaagaccctttgctcccgacgcatcaacatg
atacagacagaggagcagtatgtgttcatccacgatgccattctggaggcctgtctgtgt
ggagagacagctataccagttattgagtttgctctgacctataaggagatgctgagggtt
gactcacagagcaacacctcccagctacgagaggagttccagactttgaactctgtgacc
cctcacctggacgtggaggagtgcagcgtgtccctgctgcctaggaaccgtgagaagaac
cgtagcatggacgtcctgcctccagaccgcgccctggccttcctggttaccaccgagggc
gttgccgaggggaacagctacatcaacgctgctctcaccgacagctttcaccggcccgcc
gccttcgtggtaacgccacacccgttaccgggaaccacagcagacttctggaggctggtc
tatgactatggatgtacctcagtggtgatgctcaaccagatcaaccagtccaactctgcc
tggccgtgtctacagtactggccagagcctgggctgcagcagtttggaccaatgacagtg
gagcttctgtccatgatggctgatgatgacgtcataatccgtctgttccgggttcagaac
atcatgcggctccaggaaggtcagctggtggttcgtcatttccagttcctgcgctggtct
ccataccgtgacgtgccagactctaagaaggctttcctcagcctcctggcccaggtccac
aactggcagagggagtgtggagagggacgtaccatcgtccactgtctaaacggtggcggt
aggagcggtacattctgcgcttgtaccatgctgctagagatgatccgtcatcacagcgtg
gtggatgtcttctacgctgccaagacgctacgcaactccaaacccaacatggtggagacc
atggagcagtaccggttctgctatgacctggccttggagtacctggacgccttggactgc
ctgagtgagatagaagtgagatag
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integrated database retrieval system
