KEGG   Oncorhynchus kisutch (coho salmon): 109904436
Entry
109904436         CDS       T09179                                 
Name
(RefSeq) thrombospondin-3b-like
  KO
K04659  thrombospondin 2/3/4/5
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04145  Phagosome
oki04510  Focal adhesion
oki04512  ECM-receptor interaction
oki04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109904436
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109904436
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109904436
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109904436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109904436
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109904436
   00536 Glycosaminoglycan binding proteins [BR:oki00536]
    109904436
Membrane trafficking [BR:oki04131]
 Endocytosis
  Phagocytosis
   Opsonins
    109904436
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109904436
  Exosomal proteins of colorectal cancer cells
   109904436
  Exosomal proteins of bladder cancer cells
   109904436
Glycosaminoglycan binding proteins [BR:oki00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109904436
SSDB
Motif
Pfam: TSP_C TSP_3 COMP EGF_CA EGF_3 cEGF EGF_MSP1_1
Other DBs
NCBI-GeneID: 109904436
NCBI-ProteinID: XP_031644541
Ensembl: ENSOKIG00005023505
LinkDB
Position
LG14:60063362..60096212
AA seq 955 aa
MDMVRLVLNVLLASAAVLLGLTRASEMQVIDMLELHDARQSASAVGKMSGALGFVSDLYL
VSTLRLPPKLGGVLLGVYNKGDNRKYLEVALMGKVNKVLVRYVRKDGKLHTVNLQNPGLS
DGRTQSLILRVGGLQRNHPHMELYVNCRLADSAQVLPSMVQLPAEAESVEIRNGQKAYAR
LQGSVDSLKLALGGSIAKAGILTDCPFHGDTHFPNSVSADVNAILGDHTKALIGQLIIFN
QILGELREDIREQVKEMSLIRNTILECQVCGFHETHSRCEPNPCYKGLACTETREYPGYR
CGACPDGMTGNGTHCQDTDECALARPCFSPEGCVNTAKGFTCEPCPVGFSGPLLSGLGVE
FAKSHKQKCRDVDECAVLYKACVPNSVCINTEGSFRCGPCKESFVGNQTVGCFLRRSCAT
LGFNPCDVNAHCVIKGAARVSCECNVGWAGNGHTCGPDTDIDGYPDQPLPCIDNDYHCRA
DNCVNTPNSGQEDADGDGIGDQCDEDADGDAIKNVEDNCPLVPNKDQQNSDTDSYGDTCD
NCPNVPNGSQKDTDGNGAGDTCDNDIDGDGIPNVLDNCPKVPNPMQTDRDGDRVGDACDS
CPEVNDPMQSDTDNDLVGDVCDTNQDMDGDGHQDSRDNCPDVPNSSQLDSDNDGIGNECD
DDDDNDGIPDARPPGPDNCRLIPNPSQTDTNGNGIGDMCENDFDNDSVIDLIDVCPESSE
VTMTDFRNYQTVILDPEGDAQIEPKWIVLNRGMEIVQTMNSDPGLAIGYTAFNGVDFEGT
FHINTATDDDYVGFIFGYQDSSSFYVVMWKQKEQTYWQSLPFRAMAQPGLQLKAVKSRTG
PGEYLRNALWHTGDTPGEVTLLWKDPRNVGWRDKTSYRWHLSHRPQMGYIKVRLYEGMTL
VADSGVLVDTSMRGGRLGVFCFSQEQIIWSNLGYRCNDTVPEDYEFYRKQIHIRV
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggatatggtgaggttagtgctaaatgtgctgcttgcgagcgcggcggttctcttgggc
ttgaccagggcttcagaaatgcaagtgattgacatgctggagctgcacgatgccaggcag
agtgcgtccgcggtggggaagatgtcgggggctctgggcttcgtgtcggacctttacctg
gtgtcaactcttcgtctgccgcccaaactgggaggagtgctgttgggagtctacaacaaa
ggcgacaacaggaagtacctggaggtggccctcatgggcaaggtcaacaaagttctggtg
cgctacgtacgcaaggatggtaaactccacacagtgaacctccagaaccccggcctctct
gatggacgcacccagtcactcatcctccgtgtgggtgggctccaacgaaaccacccccac
atggaactctatgtcaactgccgattggctgactcagcacaggtcctgccatccatggtc
cagctcccagccgaggcagagtctgtggagatacgcaacgggcagaaggcctatgccagg
ctacagggctcagtggactctttgaaactggctttgggtggctctatagccaaagcagga
atccttaccgactgtccatttcatggagatacacattttccgaattcagttagcgccgat
gtcaatgccattctgggtgaccacaccaaggctttgattggccagctgatcatcttcaac
cagattcttggcgaactccgagaggacatcagggaacaggtaaaggagatgtctctgatt
aggaacactatcctggagtgccaagtgtgtggcttccacgagacccactctcgctgcgag
cccaacccctgctataagggcttggcctgtacagagaccagggagtacccagggtaccgt
tgtggtgcctgcccagacggcatgacggggaatggcacccactgccaggacactgacgag
tgtgctctagcccggccctgtttctcgcccgagggttgcgtaaacacggcaaagggcttc
acctgtgaaccatgtcccgtcggcttctccggacccctccttagcgggcttggggtggag
tttgccaagagccacaagcagaagtgcagagatgtggatgagtgtgctgtcctctacaag
gcctgtgtgccgaactctgtctgcatcaacacagagggctcgttcaggtgtggtccgtgt
aaggagagcttcgtaggcaaccagacggtgggctgtttcctacggaggtcctgcgccacg
ctgggcttcaacccctgtgacgtcaacgcccactgtgtcataaagggtgctgccagggtc
tcctgcgagtgtaatgtgggctgggcaggtaatgggcatacatgtggcccagacacagac
attgatggctaccccgaccaacctctcccctgcatagacaatgactatcactgccgagcc
gacaactgtgtgaacacgcccaactctggccaggaggacgcagacggagacggtataggt
gaccagtgtgatgaggatgcggacggagacgccatcaagaacgtggaggacaactgccct
ctggtccccaacaaagatcaacagaactcggacacagactcgtatggggacacgtgtgac
aactgccccaacgttcccaacggaagccagaaggacacagatggaaacggggctggggat
acctgtgacaatgacattgatggggatggtatcccaaacgtgctggacaactgtcccaag
gtgcccaaccctatgcagactgaccgtgatggggatcgagtgggggacgcttgtgacagc
tgcccggaagtcaacgaccccatgcagtctgatacagacaacgacctggtgggagatgtg
tgtgacaccaaccaggacatggatggggacggccaccaggattcaagggacaactgtcca
gacgtccctaacagctcccagctggactcagacaatgacggcatcggcaacgaatgcgat
gatgacgatgacaacgatggcattccagatgcgagacctcccgggccggataactgtcgt
ctcatccctaaccccagccagacagacactaatggaaatggcattggtgacatgtgcgag
aatgactttgacaacgactccgtgatagacttgattgacgtgtgtccagagagctctgaa
gtcacaatgaccgacttcagaaactatcagacggtcatcctggacccggagggcgatgcc
caaatcgaacccaagtggattgtgctcaatcggggtatggaaattgttcaaaccatgaac
agtgaccctggtttggccataggctacacagcctttaacggggtagactttgaagggaca
ttccacatcaacacggccacagacgatgactacgtgggcttcatcttcggttaccaggac
tcgtccagcttctacgtggtcatgtggaaacagaaggagcagacatactggcagtcactg
ccttttagggccatggcccagccaggcctgcaactaaaggcagtgaagtcacgtacgggt
ccaggcgagtacctccggaacgccctgtggcacacgggcgacaccccgggcgaggtcacc
ctgctgtggaaggacccccggaatgtgggctggagggacaagacatcctaccgctggcac
ctcagccaccgcccgcagatgggctacatcaaagtgaggctgtatgaaggcatgacattg
gtggcagactcgggcgtgctggtggacacctcaatgaggggcgggaggctgggcgtcttc
tgcttctcccaggagcaaatcatctggtccaacctgggctatcgctgcaacgatactgta
ccagaggactatgagttctaccgcaagcagatccacatcagggtgtga

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