Oncorhynchus kisutch (coho salmon): 109904470
Help
Entry
109904470 CDS
T09179
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109904470
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109904470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
zf-C2H2_15
zf-C2H2_jaz
STL11_N
zf-met
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
109904470
NCBI-ProteinID:
XP_020357293
Ensembl:
ENSOKIG00005014382
LinkDB
All DBs
Position
LG14:complement(53154266..53167308)
Genome browser
AA seq
731 aa
AA seq
DB search
MKNRSITEVTPYRRTPTQTKSSGEERINTKSVKMKLETAPDMSEWREDDFALNCTYIVPD
QVSDPSFGVPKAMTSIPRNLTFEYSTENEVTGVFSKEYIPQGTRFGPLQGDIYTKYNVPK
QANRKYFWRIYNGRQLYHFIDGYDLQRSNWMRYVNPAHSLSEQNLVACQNGRDVYFYTSQ
PVEPRQELLVWYSQDFAQRLCSQPGEELKQKHIIGDVRESEEKEMKDEREDEGEERIDVE
VLERDTPPDTPDDQIMDFSQKIENEKVTQDHQGPIPSPQPDQREPNLGSHVYGFPECHPT
APSPTRDLHLHGLYSHREGLVSSYPLYHPSRPIQPPYQLLPPYSSPHYPHLLLPQYPPPF
PGMLPSRGPLRYSSYPSSDGLPHPSMTHQPGLLPVSLPYPGATQGGLKERTPNMSPPCGA
PATPELSPLPKQEHQTPLPSPCGCEEAMNLSLAMPESSPSPPAPGYKSLPYPLKKQNGKI
KYECNVCIKTFGQLSNLKVHLRVHSGEKPFQCHLCLKSFTQLAHLQKHHLVHTGEKPHEC
TVCHKRFSSTSNLRTHLRLHSGEKPYQCKLCSTKFTQYIHLKLHRRLHIARDRPHCCPLC
AHAFVHRFSLRIHQRSCCPTSAQAQASSHAHTHIRELVERFDTSPEADTLPEGAGPAHLE
AAVERWVARSLEGREGKEDQSEATLLLKAFTAAINTPAPPTTSSHTSTSAYQERASVVRL
YNRPMVKTQGQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccgaagtatcaccgaagtaacaccgtaccgacgcaccccaacccaaaccaag
tccagcggggaagagcgaatcaacacaaagagtgttaagatgaagctggagacagcccca
gatatgagtgagtggcgagaggacgactttgccctcaactgcacctacattgtccctgac
caggtgtcggaccccagcttcggtgtgcccaaagccatgacgtccataccccgcaacctc
acctttgagtacagcacagagaatgaggtgacaggcgtgttcagcaaagagtacattcct
caggggactcggtttggacctctgcagggtgacatctacaccaaatacaacgtccccaaa
caggccaacaggaaatacttctggaggatctataacggcaggcagctataccacttcatc
gatggctatgacttgcagcgcagcaactggatgcgctacgtcaacccagcgcactcgctg
tccgaacagaacctggtggcgtgccagaatggccgtgacgtctacttctacaccagccag
cccgtggagcccaggcaggagctgctggtgtggtacagccaagatttcgcccagagactg
tgcagccaaccaggtgaagagctcaaacaaaaacacattatcggagatgtcagagaatcc
gaagagaaggagatgaaagacgagagagaggatgaaggggaggagagaattgatgtggag
gtgctggaaagagacacgccgcccgacacgccagacgaccaaatcatggacttcagccag
aagatagagaatgagaaggtgacccaggaccaccagggacccatcccctctcctcaaccc
gaccagcgagagcccaatctgggatctcatgtctacggcttcccagagtgccaccctacc
gccccctccccgacccgcgaccttcacctccacgggctctacagccacagagagggccta
gtgtcctcctaccccctctaccatccctccagacccattcaacccccctaccagcttctc
cccccatacagcagcccccactacccccacctcctcctcccccagtaccccccacccttc
cctgggatgctcccctccagaggccctctgcggtacagcagctatccgagtagcgatgga
cttccacacccctccatgacccaccagcctggtctgctcccagtgtctctgccctacccc
ggagcgactcagggagggctgaaggagaggaccccaaatatgtcacctccttgtggggcc
ccagccaccccagagctctctccccttcccaagcaggagcaccagacacccctgccgtca
ccctgtggctgtgaggaggccatgaacctcagcctggccatgccagagagcagcccctcg
ccacctgcccctggctacaaatccctcccctaccccctgaagaaacagaacggcaagatc
aagtacgaatgcaacgtctgcatcaagacttttggacagctgtccaacctcaaggtgcat
ctcagagtacacagtggagagaagcccttccagtgtcacctctgtctgaagagcttcacc
cagctagcccacctgcagaagcatcacctggtccacactggagagaaaccacatgagtgc
acggtgtgtcacaagcgcttcagcagcaccagcaacctccggacacacctgcggctccac
tcgggtgagaagccctaccagtgcaagctgtgcagcaccaagttcacccagtacatccac
ctcaagctccaccgacgcctgcacatcgcccgcgaccgcccccactgctgccctctctgc
gcccacgccttcgtccaccgcttctcgctgcgcatccaccagcgcagctgctgccccacc
tctgcccaggcccaagccagctcacatgcccacacccacatccgcgagctggtcgagcgc
ttcgacaccagccccgaggcggacacgctgcctgaaggggcaggaccagcccatttggaa
gctgcagtggagcgctgggtagcccggagcttggaagggcgagagggcaaggaggaccag
agtgaagccaccctgctgctcaaggccttcacggcggccattaacaccccagctcctccc
acgacgtcatcgcacacttctacttcagcctatcaggagagggctagtgtggtacgcctc
tacaaccggccaatggtgaagacgcaagggcagtag
DBGET
integrated database retrieval system
