Oncorhynchus kisutch (coho salmon): 109904550
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Entry
109904550 CDS
T09179
Name
(RefSeq) transforming acidic coiled-coil-containing protein 3 isoform X1
KO
K14283
transforming acidic coiled-coil-containing protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109904550
03036 Chromosome and associated proteins [BR:
oki03036
]
109904550
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109904550
mRNA cycle factors
P-body specific factors
109904550
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Sister chromatid separation proteins
TACC proteins
109904550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TACC_C
Lzipper-MIP1
DUF5063
TetR_C_46
Motif
Other DBs
NCBI-GeneID:
109904550
NCBI-ProteinID:
XP_031643981
Ensembl:
ENSOKIG00005004625
LinkDB
All DBs
Position
LG14:25800615..25810429
Genome browser
AA seq
1224 aa
AA seq
DB search
MSSTAVNDENRGVCTGRKQSNSETICDLFSFDQPTGRPSILRQSQAENLSNKTIAKGGKV
CFQTPRRDPLTKRIVSPTKSLKIESLDDCSKALDTLQFTSPEEVVPLETNGLVDVAKSDF
TNVSSYPDDDMQSKGGCQLYFDNLDAINPFQGSTKMVLSPARLSELVETPKAEEPRERNV
IEEVSDRNEKALDDTLPFMPSVENYLADFSADMCSTDSGVITVMKDPAEKLSNSGEEETV
PSVNLNPDQAVAIISTAEETSLPPKGTYEFDFDNLDSVNPFQTGGSKLQNSPVFGTKQPC
HDPEKVEVEEPPLKEMEPAAMLEVVQPVLEAPVQPEIKPIAPKETSKPAEDAVAITSTAE
ETALLPKGTYEFDFDKLDSVNPFQTGGSKLQNSPVLGTKQPCHDPEKVEVEEPALKEMEP
AAMLEVVQPVLEAPVQPEIKPIAPKETSKPAEDAVAITSTAEETALLPKGTYEFDFDNLD
SVNPFQTGGSKLQNSPVLGTKQPCHDPEKVEVEEPALKEMEPAAMLEAVQPVLEAPVQPE
IKPIAPKETSKPAEVAVAITSTAEETALLPKGTYEFDFDNLDSVNPFQTGGSKLQNSPVL
GRKRPCDDPQKVEVEEPAAMLEVVQPVLEAPVQPEINPIAPLSTAPEETSKPAEESIPQP
SAALSKDGAVKLELNFDDDSEVNPPPKKFDKRPVLKPTWKKALPTEKKEPAQSKESPVKP
LVNTDYEIPLPMGKYNFDFDKFDPSVNPFGTNVKMTESTVCKVKSSPDAKAPTSVRVAVY
PEKVAEPVQQETAPSLIVSIAGYEPDRSAVKGIDNIPQNLTLQMDSSEVQDPSSGKEQEP
PTKPDQPLLNTPEPLELCQFEQTPQNDMSEFNEDFVPGTTFMANDFDRQMDYLEQFGSST
FKESALRKQSLYLKFDPLMRESPNKSGVPAGLNNLPRPAPFASRCLCQVRDVSFSVETQN
TGTDEVNGLKSVNPKLLHDLPPVQVVGPRTLVTNSPVLENLLPTFPQPANPDDNIIEVLK
YSQQDMNVAIAKIQKQANENADEWKSKHDTLSQDNHEMGKIMSAFEATIAQILADKQREM
EKAQADITKVLQEKEQLSEDLNAMERSFSDLFKRLDKYKEVIEGYIKNEEMLKKCAQDYL
ARIKEEEQRYQTLKAHAEQKISLANGEIAEVRSKLKSEVAALQAQLRREQLKAQSLEKSL
DQKVKETEELTNLCDELIAKVQKG
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagttctactgctgtaaacgatgagaatcgtggggtctgcactggaagaaagcagagc
aattcagagacaatttgtgacctcttttcttttgatcagccgactgggaggccctccatt
cttcgccagtctcaggcagagaacctgtcaaacaaaactatagcaaagggcggaaaggtt
tgttttcagactccaagaagagaccctctcactaagagaatagtatcaccaacaaagtcc
cttaagatagaaagcctggatgactgtagtaaagccctggatacattgcagtttacatca
cccgaagaggtggtacctctagaaaccaatgggcttgttgatgtagcaaaatcagacttc
acaaatgtgtcgtcctatcctgatgatgatatgcagagtaaaggaggttgtcagctgtat
tttgacaaccttgatgccatcaatcccttccaagggtctactaaaatggtcctctcccca
gcaaggctcagtgagctagttgaaactcccaaggctgaagaaccgcgtgaacgtaatgtc
attgaagaagtttctgacaggaatgaaaaggcactggatgatacactcccgttcatgcca
tcagtggaaaattatcttgctgacttctcagccgatatgtgctcaacagatagcggagtg
attaccgtgatgaaggacccagctgagaagttatccaactctggtgaggaagaaactgta
ccatcagttaacctcaacccagatcaagctgtggctatcatctctacagccgaggagact
tctctgccaccaaaaggtacatacgaatttgattttgacaaccttgattcagtcaaccct
ttccaaacgggaggctccaaattgcagaattcccctgtgtttggaacaaagcagccatgc
catgaccctgaaaaggtggaagttgaagagccaccactaaaggaaatggaaccagcagcc
atgcttgaggtggttcagcctgtcctagaagcacctgtccagccagaaattaaacctatt
gcaccgaaggagacttccaagccagctgaagatgctgtggccatcacctctacagccgag
gagactgctctgctgccaaaaggtacatatgaatttgattttgacaagcttgattcagtc
aaccctttccaaacgggaggctccaaattgcagaattcccctgtgcttggaacaaagcag
ccatgccatgaccctgaaaaggtggaagttgaagagcctgcactaaaggaaatggaacca
gcagccatgcttgaggtggttcagcctgtcctagaagcacctgtccagccagaaattaaa
cctattgcaccgaaggagacttccaagccagctgaagatgctgtggccatcacctctaca
gccgaggagactgctctgctgccaaaaggtacatatgaatttgattttgacaaccttgat
tcagtcaaccctttccaaacgggaggctccaaattgcagaattcccctgtgcttggaaca
aagcagccatgccatgaccctgaaaaggtggaagttgaagagcctgcactaaaggaaatg
gaaccagcagccatgcttgaggcggttcagcctgtcctagaagcacctgtccagccagaa
attaaacctattgcaccgaaggagacttccaagccagctgaagttgctgtggccatcacc
tctacagccgaggagactgctctgctgccaaaaggtacatatgaatttgattttgacaac
cttgattcagtcaaccctttccaaacgggaggctccaaattgcagaattcccctgtgctt
ggaaggaagcggccatgcgatgaccctcaaaaggtggaagttgaagagcctgcagccatg
cttgaggtggttcagcctgtcctagaggcacctgtccagccagagattaaccctattgca
ccattgtcaactgctcccgaagagaccagcaagccagctgaagaatccatacctcagccc
agtgcagccctttccaaggatggtgcagtgaaacttgagttaaattttgatgatgacagc
gaggtcaaccccccccccaaaaagtttgacaaaaggcctgttttgaagccgacatggaaa
aaggctctacctacagaaaaaaaagaacctgctcaatccaaggaatctccagtgaagcca
ttggtcaatactgattatgaaattcctcttcccatgggcaagtacaactttgactttgat
aaatttgacccaagtgtcaatccatttggtacaaatgtaaaaatgactgaatctacagtc
tgtaaggtgaaatccagtccagatgccaaggcaccaacctcagtcagggtggctgtctac
cctgagaaagtggcagagcctgttcagcaagaaactgcaccatcactaattgtttctatt
gctggatatgaacctgatcgttctgccgtaaaaggaattgacaacattccacagaatctg
acgcttcagatggactcttctgaagttcaggatccttcctctggaaaagagcaggaacct
ccaactaaacctgaccaacctttgctaaacactccagaacccttggaactctgccaattt
gagcagaccccacagaatgacatgtcagaatttaatgaggactttgttcctggaactaca
ttcatggcgaatgactttgacaggcagatggactacctggagcagtttgggtccagcact
tttaaggagtcggcactgagaaaacaatcactgtacctcaaatttgacccactaatgcgg
gagagccccaataagtctggagtccctgcaggactcaacaacctcccacgacctgctccc
tttgcttcacggtgtttgtgccaagtgagggatgtttctttcagtgtggagacccagaat
actggaaccgatgaggtgaatggactgaaatctgtcaaccctaaactgcttcatgaccta
ccacctgttcaagttgttggtcctcggactcttgtgacgaattcccctgttcttgagaat
ctgctccctactttcccccaaccagccaaccctgatgataacatcatagaggtgctgaaa
tacagtcagcaagacatgaatgttgctattgccaagatccagaaacaagcaaatgagaat
gcggatgaatggaaatcgaagcatgacacgctatctcaggataatcatgaaatggggaaa
atcatgtcagcatttgaagccacaatcgctcagatattggctgataaacagagggagatg
gagaaggcccaggctgacatcactaaagtcctgcaggagaaggaacagttatcagaggac
ctgaatgcaatggagcggtccttctcagatctcttcaagagactagacaaatacaaagag
gtcattgagggttacataaagaatgaagagatgctgaagaaatgtgctcaagattacctg
gctaggatcaaggaggaggagcagcgctaccagaccctgaaagcccatgcagagcagaaa
attagcctggcaaatggagagattgcggaggtgcgctccaaattaaagtctgaagtcgct
gcacttcaggcccagctgcgcagggagcagctaaaggcccagtcactggagaagagcctt
gaccagaaagtaaaagagactgaagaactcaccaacctttgcgatgaactaatagctaaa
gtccagaagggctga
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integrated database retrieval system
