Oncorhynchus kisutch (coho salmon): 109904613
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Entry
109904613 CDS
T09179
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
oki04210
Apoptosis
oki04217
Necroptosis
oki04218
Cellular senescence
oki04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109904613
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109904613
04217 Necroptosis
109904613
04218 Cellular senescence
109904613
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109904613
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109904613
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
109904613
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C2: calpain family
109904613
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_6
EF-hand_1
Cpf1_PI-like
Motif
Other DBs
NCBI-GeneID:
109904613
NCBI-ProteinID:
XP_031643604
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Position
LG14:complement(7614392..7638519)
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AA seq
698 aa
AA seq
DB search
MPPPGVCMSIMQERHKKEGVGSLANPEKHSNQDFQQLTQYCLARGVRYIDEMFPPDHNSI
GDGLLSPDDMGRVVWLRPAKMVQNPDFILDGLSRFDFGQGMVGDCWFLASIGALTFQKHI
LEQVVPLNQSFKEDYCGIFHFRFWRFGKWVDVVIDDKLPTVDGRLIFVHSKTPNEFWPAL
LEKAYAKVCGSYADMNLGTPAEAMMDFTGGVHITFKLTDAPPNLWDLLFRAVQSKSLMGC
NTPQGETSANTVAPNGLVRGHAYTVTGVKQIMSQGRPVNLIRLFNPWGRGEWKGGWSDKS
SMWQTVSPDDRKMCLSVKEDGEFWMTMEDFCRHFTDVTICCMCPDFLDGNSKGLWTHSLH
DGRWVAGTTAGGCMNFPDSFWTNPQYRVKIGGLSGVCSETQGDNNMLVSLMQKPDKRNRR
LVKSLHIGINIFEVPAQFKGQSGKFPASFFNNNVPVAQTKNYLNARTVVVFSRLKPGEYL
IVPSAFNPNETASFILSILSKVEAHIHENSNDQDTVEIPKPMPTHNRADMDNKQTLFRQY
SDQFEEVDAEQLQRILHETLLQGYAKKTQGFSLESCRSMVALMDTSITGKLNSSEFLHLW
RKVTVYKDIFFRSDVNRSGMLSLSQLRNAIMASGVRLSDSLLNLIALRYGGSSGNISLES
FISLVLRVDRMAKIFRQLNEGGAISLRDNEWMYITMYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccggtgtgtgtatgagtataatgcaggagcgccacaagaaagagggtgtt
gggagtcttgccaacccagagaaacacagcaaccaagactttcagcagctgacgcaatac
tgtttggccaggggagtgaggtacatcgatgagatgttccccccagaccataactccatt
ggtgatgggctactttcccctgatgacatgggcagagtggtgtggttgagaccagcgaaa
atggtacagaatccagattttatccttgatggactttcaaggtttgactttgggcaagga
atggttggagattgctggtttcttgcttccattggggctttgacgttccagaagcacatc
ctggaacaagtagtacccctaaaccaaagctttaaagaggattactgcggaatattccac
ttcaggttctggaggtttgggaagtgggtggacgttgtgatcgatgacaagctaccaaca
gttgacggcaggctcattttcgttcattcaaaaactcccaatgagttttggcccgccttg
ctggagaaagcctatgccaaggtgtgtggctcctacgcagacatgaatttagggacccct
gcagaggctatgatggacttcactggaggggttcacatcacattcaagctcactgatgct
ccaccaaatctgtgggacctcctgttcagagctgtccaatccaaatctctgatggggtgt
aacacacctcaaggggaaacatcagcaaacacagtggcacccaacggattagtgaggggt
catgcttacaccgtcacaggggttaaacagatcatgagccaaggcagaccagtgaatctg
atccgcctcttcaacccctggggccggggagagtggaagggaggctggagcgataagtct
tccatgtggcaaacagtgagtcctgacgatcggaagatgtgtctgtcagtgaaagaggat
ggggaattctggatgacaatggaagacttctgtaggcacttcacagatgtgactatctgc
tgtatgtgccctgattttctcgacggcaactctaaaggtctttggacacactccttacat
gatggcagatgggttgctggaaccactgctggaggttgcatgaatttcccagacagtttc
tggaccaatccccagtatcgggtgaagattgggggattgagcggtgtctgctctgagaca
cagggcgacaacaacatgttggtgtctctgatgcagaagcctgacaagagaaacagacgc
ctggtcaaaagtctccacatcggcatcaacatcttcgaggtgcctgcccaattcaaagga
cagagtgggaagtttcctgcctccttcttcaacaacaatgtgcctgtcgcccaaacgaag
aactacctgaatgctcgaacagtggtggtgttctccaggctgaaacctggtgaatacctg
atcgtgccatcagccttcaacccaaacgaaaccgcctcctttatcttgtccatcctctcc
aaggtggaggcccacatccatgaaaactcaaatgaccaagatactgtggaaatccccaag
cccatgcctactcacaatagagcagatatggacaacaaacaaactctgtttcggcaatat
tctgatcagtttgaggaggtggatgctgaacagcttcagaggattctacatgaaactctc
ctccaaggatatgcaaagaaaacacaaggcttcagcttggagtcctgtcgaagcatggtg
gccttaatggatacatcaatcactggaaaactgaacagttctgaatttctacatctatgg
agaaaagttaccgtgtacaaggatatcttcttccgttcagatgtgaaccgttctggaatg
ttgtcattgagtcaactgaggaacgcaatcatggcttcaggggtcaggctgagtgacagt
ctgttgaacctcattgctctgcgctacggtggatcttctggaaacatcagcctggagagt
ttcatcagcctcgttctacgcgtggaccgcatggccaaaatattcagacaactcaacgag
ggaggggccatatctcttcgagacaatgagtggatgtacattactatgtacgcataa
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