KEGG   Oncorhynchus kisutch (coho salmon): 109904672
Entry
109904672         CDS       T09179                                 
Symbol
zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109904672 (zc3h12a)
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     109904672 (zc3h12a)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 zf-CCCH
Other DBs
NCBI-GeneID: 109904672
NCBI-ProteinID: XP_020357444
Ensembl: ENSOKIG00005022030
UniProt: A0A8C7H1S9
LinkDB
Position
LG14:complement(68052710..68065485)
AA seq 621 aa
MHQRGTKCSAPEESGKTATDPGEAQLDFYRKLGYSPAQVQTVLQKFGLNTDTNRILGELV
QTGASPEGMEKEGAPTTMSVLVARGETLSSLPFTPPPIWEDAASEEEDDLKPIVIDGSNM
AMSHGNKEVFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVPITDQHILRELERK
KIMVFTPSRRVAGRRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERQEWKRFIEERLL
MFSFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQLCPYGRKCTYGIKCKFYHPERVN
QSNRSLADELREKAKLPLSQQKHPTTGPGLAYGLSLEEQMAQKLTLEQWNGSLKKGLTSE
NVLLKGGHRSSWTSPAKKASTNQHSPTDLDSALASGSQERLDSGLGSFESQASDPSRNHC
DHYSNAGYRNCQSKSAPSMKQQRYSLPSDLPCSCCSHAPQPSGPSAGYQQHHSPHHSMGP
ASTHNPDMMTYYPPCYPNYGTPMYSVSMHQYSHHSNFQQQGRVHHSQQTFWSNPFGTYPQ
TLHCIAQVEQQRHWSTARTQPSPHGECREREDGREREDVRKKLLAIFNGRLVDRAMDMFP
HLMDPQRLAAEILTLRSSQGL
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgcaccagagaggcaccaaatgctctgctccagaggagagcggcaagaccgccacagac
cctggagaggctcagctggacttctaccgtaaactgggctactccccagcgcaggtccag
accgtgctgcagaagtttggcctgaacacagacactaacaggattctgggggagctggtg
cagactggagccagcccagaagggatggagaaggagggagccccaactaccatgtctgtc
ctggttgctagaggggagacccttagtagcctgcccttcacccctccaccaatttgggag
gatgcagccagtgaggaggaagatgacctgaaacccatagtgatcgatgggagtaatatg
gctatgagccacgggaacaaggaagtgttttcctgcctgggaatccagctggctgtgaac
ttcttcctggacaggggtcatactgatatcactgtgtttgttccctcatggaggaaggag
cagcccagaccagatgtccccatcacagatcaacacattttgcgtgagctggagagaaag
aaaatcatggtgttcaccccttcgcggcgtgtagcgggcagacgtgtggtctgctacgat
gatcgcttcatcgtcaagctggcatatgagtcagacggtgtcatcgtatccaacgacaca
taccgtgaccttcagggcgagagacaggagtggaagcgcttcatcgaggagaggctgctc
atgttctcgtttgtcaatgacaagttcatgccccctgatgaccccctgggtcgccatggt
cccaccctagagaactttctacggaaggttcctcggttaccacgcaaacagctatgtcct
tacggaaggaaatgcacttatggaataaagtgtaaattctaccacccggagcgagtcaac
caatccaatcgctctttggctgacgagctgcgggagaaggccaagctgcccttgtcacag
cagaaacaccccaccacaggtcctggacttgcctatggcctttccctggaggagcagatg
gctcagaaactgaccctagaacagtggaatggctccttgaagaaaggcctcaccagtgag
aatgttcttctcaagggaggccatcgctccagctggacgtccccagctaagaaggccagc
accaaccaacattccccgaccgacctggactcggccctggccagtggctctcaagagagg
ctagattctgggctgggctccttcgagagccaggcatctgacccctctagaaaccactgt
gatcactatagcaacgctgggtacaggaactgccagtcaaagtccgcccccagtatgaaa
caacaacgctattctctccctagcgacctgccttgtagctgctgctcccatgctcctcag
ccttcaggccccagtgcaggataccaacaacaccacagcccacaccatagcatgggccca
gccagcacccacaacccagacatgatgacctactaccccccttgttaccccaactatgga
acaccaatgtattcagttagtatgcatcagtatagccaccacagtaacttccaacagcag
ggcagggtccaccattcacagcagaccttctggtcgaacccgtttgggacttatcctcag
actctccattgcattgctcaggtggagcagcagagacactggtccactgcccggacacag
ccgagcccccatggggagtgcagggagagggaggacggcagggagagggaggatgtcagg
aagaagctgctggccatctttaacggccgtctggtggacagggccatggacatgttcccc
catctcatggacccacagagactggctgctgagatcctcaccctgagatcctctcagggc
ctgtga

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