Oncorhynchus kisutch (coho salmon): 109904672
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Entry
109904672 CDS
T09179
Symbol
zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109904672 (zc3h12a)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109904672 (zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
109904672
NCBI-ProteinID:
XP_020357444
Ensembl:
ENSOKIG00005022030
UniProt:
A0A8C7H1S9
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Position
LG14:complement(68052710..68065485)
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AA seq
621 aa
AA seq
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MHQRGTKCSAPEESGKTATDPGEAQLDFYRKLGYSPAQVQTVLQKFGLNTDTNRILGELV
QTGASPEGMEKEGAPTTMSVLVARGETLSSLPFTPPPIWEDAASEEEDDLKPIVIDGSNM
AMSHGNKEVFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVPITDQHILRELERK
KIMVFTPSRRVAGRRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERQEWKRFIEERLL
MFSFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQLCPYGRKCTYGIKCKFYHPERVN
QSNRSLADELREKAKLPLSQQKHPTTGPGLAYGLSLEEQMAQKLTLEQWNGSLKKGLTSE
NVLLKGGHRSSWTSPAKKASTNQHSPTDLDSALASGSQERLDSGLGSFESQASDPSRNHC
DHYSNAGYRNCQSKSAPSMKQQRYSLPSDLPCSCCSHAPQPSGPSAGYQQHHSPHHSMGP
ASTHNPDMMTYYPPCYPNYGTPMYSVSMHQYSHHSNFQQQGRVHHSQQTFWSNPFGTYPQ
TLHCIAQVEQQRHWSTARTQPSPHGECREREDGREREDVRKKLLAIFNGRLVDRAMDMFP
HLMDPQRLAAEILTLRSSQGL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagagaggcaccaaatgctctgctccagaggagagcggcaagaccgccacagac
cctggagaggctcagctggacttctaccgtaaactgggctactccccagcgcaggtccag
accgtgctgcagaagtttggcctgaacacagacactaacaggattctgggggagctggtg
cagactggagccagcccagaagggatggagaaggagggagccccaactaccatgtctgtc
ctggttgctagaggggagacccttagtagcctgcccttcacccctccaccaatttgggag
gatgcagccagtgaggaggaagatgacctgaaacccatagtgatcgatgggagtaatatg
gctatgagccacgggaacaaggaagtgttttcctgcctgggaatccagctggctgtgaac
ttcttcctggacaggggtcatactgatatcactgtgtttgttccctcatggaggaaggag
cagcccagaccagatgtccccatcacagatcaacacattttgcgtgagctggagagaaag
aaaatcatggtgttcaccccttcgcggcgtgtagcgggcagacgtgtggtctgctacgat
gatcgcttcatcgtcaagctggcatatgagtcagacggtgtcatcgtatccaacgacaca
taccgtgaccttcagggcgagagacaggagtggaagcgcttcatcgaggagaggctgctc
atgttctcgtttgtcaatgacaagttcatgccccctgatgaccccctgggtcgccatggt
cccaccctagagaactttctacggaaggttcctcggttaccacgcaaacagctatgtcct
tacggaaggaaatgcacttatggaataaagtgtaaattctaccacccggagcgagtcaac
caatccaatcgctctttggctgacgagctgcgggagaaggccaagctgcccttgtcacag
cagaaacaccccaccacaggtcctggacttgcctatggcctttccctggaggagcagatg
gctcagaaactgaccctagaacagtggaatggctccttgaagaaaggcctcaccagtgag
aatgttcttctcaagggaggccatcgctccagctggacgtccccagctaagaaggccagc
accaaccaacattccccgaccgacctggactcggccctggccagtggctctcaagagagg
ctagattctgggctgggctccttcgagagccaggcatctgacccctctagaaaccactgt
gatcactatagcaacgctgggtacaggaactgccagtcaaagtccgcccccagtatgaaa
caacaacgctattctctccctagcgacctgccttgtagctgctgctcccatgctcctcag
ccttcaggccccagtgcaggataccaacaacaccacagcccacaccatagcatgggccca
gccagcacccacaacccagacatgatgacctactaccccccttgttaccccaactatgga
acaccaatgtattcagttagtatgcatcagtatagccaccacagtaacttccaacagcag
ggcagggtccaccattcacagcagaccttctggtcgaacccgtttgggacttatcctcag
actctccattgcattgctcaggtggagcagcagagacactggtccactgcccggacacag
ccgagcccccatggggagtgcagggagagggaggacggcagggagagggaggatgtcagg
aagaagctgctggccatctttaacggccgtctggtggacagggccatggacatgttcccc
catctcatggacccacagagactggctgctgagatcctcaccctgagatcctctcagggc
ctgtga
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